RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 CRYGAP11844 174 aa4.98□□□□□ -1.61
HERC4-211ENST00000492996 KRTAP10-11P60412 298 aa4.98□□□□□ -1.61
HERC4-211ENST00000492996 PIK3CD-AS1Q5SR53 167 aa4.98□□□□□ -1.61
HERC4-211ENST00000492996 BRK1Q8WUW1 75 aa4.98□□□□□ -1.61
HERC4-211ENST00000492996 IMUPQ9GZP8 106 aa4.98□□□□□ -1.61
HERC4-211ENST00000492996 C11orf68Q9H3H3 251 aaKnown RBP4.98□□□□□ -1.61
HERC4-211ENST00000492996 ATOX1O00244 68 aa4.97□□□□□ -1.61
HERC4-211ENST00000492996 NPC2P61916 151 aa4.97□□□□□ -1.61
HERC4-211ENST00000492996 RPL36AP83881 106 aaKnown RBP4.97□□□□□ -1.61
HERC4-211ENST00000492996 Q5XG85 94 aa4.97□□□□□ -1.61
HERC4-211ENST00000492996 RPL36ALQ969Q0 106 aaKnown RBP4.97□□□□□ -1.61
HERC4-211ENST00000492996 ATP5G1P05496 136 aa4.97□□□□□ -1.61
HERC4-211ENST00000492996 SPANXDQ9BXN6 97 aa4.97□□□□□ -1.61
HERC4-211ENST00000492996 F8P00451 2351 aa4.97□□□□□ -1.61
HERC4-211ENST00000492996 VPS13BQ7Z7G8 4022 aa4.97□□□□□ -1.61
HERC4-211ENST00000492996 LCE6AA0A183 80 aa4.96□□□□□ -1.61
HERC4-211ENST00000492996 K7EQD1 137 aa4.96□□□□□ -1.61
HERC4-211ENST00000492996 OXTP01178 125 aa4.96□□□□□ -1.61
HERC4-211ENST00000492996 IGHV3-30P01768 117 aa4.96□□□□□ -1.61
HERC4-211ENST00000492996 IGHV3-33P01772 117 aa4.96□□□□□ -1.61
HERC4-211ENST00000492996 IGHV3-30-5P0DP03 117 aa4.96□□□□□ -1.61
HERC4-211ENST00000492996 TEP1Q99973 2627 aaKnown RBP4.96□□□□□ -1.61
HERC4-211ENST00000492996 DEFB130BP0DP73 79 aa4.96□□□□□ -1.62
HERC4-211ENST00000492996 DEFB130AP0DP74 79 aa4.96□□□□□ -1.62
HERC4-211ENST00000492996 MRPS36P82909 103 aaKnown RBP4.96□□□□□ -1.62
HERC4-211ENST00000492996 LINC00643Q86TS7 51 aa4.96□□□□□ -1.62
HERC4-211ENST00000492996 CDKN2A-AS1Q9UH64 79 aa4.96□□□□□ -1.62
HERC4-211ENST00000492996 TRGV4A0A0C4DH28 118 aa4.96□□□□□ -1.62
HERC4-211ENST00000492996 IGKV3OR2-268A0A0C4DH90 116 aa4.96□□□□□ -1.62
HERC4-211ENST00000492996 CIRBPQ14011 172 aaKnown RBP4.96□□□□□ -1.62
HERC4-211ENST00000492996 NTM-AS1Q6ZSK4 140 aa4.96□□□□□ -1.62
HERC4-211ENST00000492996 CYSTM1Q9H1C7 97 aa4.96□□□□□ -1.62
HERC4-211ENST00000492996 A0A0U1RRA0 63 aa4.95□□□□□ -1.62
HERC4-211ENST00000492996 PLAC8L1A1L4L8 177 aa4.95□□□□□ -1.62
HERC4-211ENST00000492996 MUSTN1Q8IVN3 82 aa4.95□□□□□ -1.62
HERC4-211ENST00000492996 CLEC2BQ92478 149 aa4.95□□□□□ -1.62
HERC4-211ENST00000492996 NDUFA12Q9UI09 145 aa4.95□□□□□ -1.62
HERC4-211ENST00000492996 A0A0J9YXY3 114 aa4.95□□□□□ -1.62
HERC4-211ENST00000492996 H7C423 109 aa4.95□□□□□ -1.62
HERC4-211ENST00000492996 COX6A2Q02221 97 aa4.95□□□□□ -1.62
HERC4-211ENST00000492996 ZNF625Q96I27 306 aaPredicted RBP4.95□□□□□ -1.62
HERC4-211ENST00000492996 FAM240AA0A1B0GVK7 77 aa4.95□□□□□ -1.62
HERC4-211ENST00000492996 DAND5Q8N907 189 aa4.95□□□□□ -1.62
HERC4-211ENST00000492996 C16orf74Q96GX8 76 aa4.95□□□□□ -1.62
HERC4-211ENST00000492996 IGHV1-58A0A0C4DH39 117 aa4.94□□□□□ -1.62
HERC4-211ENST00000492996 H3BT86 120 aa4.94□□□□□ -1.62
HERC4-211ENST00000492996 TRIAP1O43715 76 aa4.94□□□□□ -1.62
HERC4-211ENST00000492996 ACYP1P07311 99 aa4.94□□□□□ -1.62
HERC4-211ENST00000492996 CSNK1G2-AS1Q8NCQ2 148 aa4.94□□□□□ -1.62
HERC4-211ENST00000492996 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.94□□□□□ -1.62
HERC4-211ENST00000492996 DAZ2Q13117 558 aaKnown RBP4.94□□□□□ -1.62
HERC4-211ENST00000492996 VSIG2Q96IQ7 327 aa4.94□□□□□ -1.62
HERC4-211ENST00000492996 DNAH10Q8IVF4 4471 aa4.94□□□□□ -1.62
HERC4-211ENST00000492996 DEFB4AO15263 64 aa4.93□□□□□ -1.62
HERC4-211ENST00000492996 ADAMTSL4-AS1Q5T5F5 129 aa4.93□□□□□ -1.62
HERC4-211ENST00000492996 TRBV10-1A0A0K0K1A3 114 aa4.93□□□□□ -1.62
HERC4-211ENST00000492996 SDIM1Q6ZPB5 146 aa4.93□□□□□ -1.62
HERC4-211ENST00000492996 C2orf48Q96LS8 159 aa4.93□□□□□ -1.62
HERC4-211ENST00000492996 MEGF8Q7Z7M0 2845 aa4.93□□□□□ -1.62
HERC4-211ENST00000492996 IGKV3D-7A0A0C4DH55 119 aa4.93□□□□□ -1.62
HERC4-211ENST00000492996 UBE2L6O14933 153 aa4.93□□□□□ -1.62
HERC4-211ENST00000492996 EIF4EBP3O60516 100 aaPredicted RBP4.93□□□□□ -1.62
HERC4-211ENST00000492996 LINC00242Q5T6M2 205 aa4.93□□□□□ -1.62
HERC4-211ENST00000492996 DYNC1H1Q14204 4646 aaKnown RBP4.92□□□□□ -1.62
HERC4-211ENST00000492996 SACSQ9NZJ4 4579 aa4.92□□□□□ -1.62
HERC4-211ENST00000492996 A0A0B4J2C4 111 aa4.92□□□□□ -1.62
HERC4-211ENST00000492996 DAZ4Q86SG3 579 aaKnown RBP4.92□□□□□ -1.62
HERC4-211ENST00000492996 TMEM243Q9BU79 118 aa4.92□□□□□ -1.62
HERC4-211ENST00000492996 RETNQ9HD89 108 aa4.92□□□□□ -1.62
HERC4-211ENST00000492996 DAZ3Q9NR90 486 aaKnown RBP4.92□□□□□ -1.62
HERC4-211ENST00000492996 A0A096LPF7 62 aa4.92□□□□□ -1.62
HERC4-211ENST00000492996 SERP2Q8N6R1 65 aa4.92□□□□□ -1.62
HERC4-211ENST00000492996 ICOSQ9Y6W8 199 aa4.91□□□□□ -1.62
HERC4-211ENST00000492996 RPL18AQ02543 176 aaKnown RBP4.91□□□□□ -1.62
HERC4-211ENST00000492996 SMCR5Q8TEV8 140 aa4.91□□□□□ -1.62
HERC4-211ENST00000492996 Q9H8V8 135 aa4.91□□□□□ -1.62
HERC4-211ENST00000492996 BIRC6Q9NR09 4857 aa4.91□□□□□ -1.62
HERC4-211ENST00000492996 HIST1H4AP62805 103 aaKnown RBP4.91□□□□□ -1.62
HERC4-211ENST00000492996 FHL2Q14192 279 aa4.91□□□□□ -1.62
HERC4-211ENST00000492996 DEFB135Q30KP9 77 aa4.91□□□□□ -1.62
HERC4-211ENST00000492996 LITAFQ99732 161 aa4.91□□□□□ -1.62
HERC4-211ENST00000492996 CDC42SE2Q9NRR3 84 aa4.91□□□□□ -1.62
HERC4-211ENST00000492996 KMT2AQ03164 3969 aa4.91□□□□□ -1.62
HERC4-211ENST00000492996 STAB1Q9NY15 2570 aa4.9□□□□□ -1.62
HERC4-211ENST00000492996 TIRAPP58753 221 aa4.9□□□□□ -1.63
HERC4-211ENST00000492996 OVOL2Q9BRP0 275 aa4.9□□□□□ -1.63
HERC4-211ENST00000492996 IGLV4-60A0A075B6I1 120 aa4.9□□□□□ -1.63
HERC4-211ENST00000492996 A0A087WVE0 104 aa4.9□□□□□ -1.63
HERC4-211ENST00000492996 TRBV30A0A0K0K1B3 111 aa4.9□□□□□ -1.63
HERC4-211ENST00000492996 TRBV6-4A0A1B0GX49 114 aa4.9□□□□□ -1.63
HERC4-211ENST00000492996 LINC01561Q8N1V8 128 aa4.9□□□□□ -1.63
HERC4-211ENST00000492996 TOMM7Q9P0U1 55 aa4.9□□□□□ -1.63
HERC4-211ENST00000492996 CXCL5P42830 114 aa4.89□□□□□ -1.63
HERC4-211ENST00000492996 SMIM1B2RUZ4 78 aa4.89□□□□□ -1.63
HERC4-211ENST00000492996 GYPEP15421 78 aa4.89□□□□□ -1.63
HERC4-211ENST00000492996 NDUFC2O95298 119 aa4.88□□□□□ -1.63
HERC4-211ENST00000492996 MIAQ16674 131 aa4.88□□□□□ -1.63
HERC4-211ENST00000492996 FAM222AQ5U5X8 452 aa4.88□□□□□ -1.63
HERC4-211ENST00000492996 C20orf197Q8N268 126 aa4.88□□□□□ -1.63
HERC4-211ENST00000492996 PKHD1P08F94 4074 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms