RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SPCS1Q9Y6A9 102 aa9.58□□□□□ -0.88
PTPN7-216ENST00000492977 MEIG1Q5JSS6 88 aa9.58□□□□□ -0.88
PTPN7-216ENST00000492977 TRAV10A0A0B4J240 114 aa9.57□□□□□ -0.88
PTPN7-216ENST00000492977 PPDPFQ9H3Y8 114 aa9.57□□□□□ -0.88
PTPN7-216ENST00000492977 NOTCH1P46531 2555 aa9.57□□□□□ -0.88
PTPN7-216ENST00000492977 COX7A2LO14548 114 aa9.56□□□□□ -0.88
PTPN7-216ENST00000492977 TSPAN13O95857 204 aa9.56□□□□□ -0.88
PTPN7-216ENST00000492977 C6orf226Q5I0X4 101 aa9.56□□□□□ -0.88
PTPN7-216ENST00000492977 Q8IZM0 81 aa9.56□□□□□ -0.88
PTPN7-216ENST00000492977 ESRGQ1W209 222 aa9.55□□□□□ -0.88
PTPN7-216ENST00000492977 LINC00308Q8TCZ7 52 aa9.55□□□□□ -0.88
PTPN7-216ENST00000492977 KLK12Q9UKR0 248 aa9.55□□□□□ -0.88
PTPN7-216ENST00000492977 DAND5Q8N907 189 aa9.54□□□□□ -0.88
PTPN7-216ENST00000492977 IGLV10-54A0A075B6I4 117 aa9.54□□□□□ -0.88
PTPN7-216ENST00000492977 IBA57-AS1B1ANH7 110 aa9.54□□□□□ -0.88
PTPN7-216ENST00000492977 IGHV3-33P01772 117 aa9.54□□□□□ -0.88
PTPN7-216ENST00000492977 PCP4P48539 62 aa9.54□□□□□ -0.88
PTPN7-216ENST00000492977 FOXI1Q12951 378 aa9.54□□□□□ -0.88
PTPN7-216ENST00000492977 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
PTPN7-216ENST00000492977 C15orf53Q8NAA6 179 aa9.54□□□□□ -0.88
PTPN7-216ENST00000492977 ERG28Q9UKR5 140 aa9.54□□□□□ -0.88
PTPN7-216ENST00000492977 TRAV8-4A0A0B4J246 113 aa9.53□□□□□ -0.88
PTPN7-216ENST00000492977 MALP21145 153 aa9.53□□□□□ -0.88
PTPN7-216ENST00000492977 NPC2P61916 151 aa9.53□□□□□ -0.88
PTPN7-216ENST00000492977 LYRM7Q5U5X0 104 aa9.53□□□□□ -0.88
PTPN7-216ENST00000492977 WFDC10BQ8IUB3 73 aa9.53□□□□□ -0.88
PTPN7-216ENST00000492977 TENM3Q9P273 2699 aa9.53□□□□□ -0.88
PTPN7-216ENST00000492977 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
PTPN7-216ENST00000492977 GAGE12HA6NDE8 117 aa9.51□□□□□ -0.89
PTPN7-216ENST00000492977 CRPP02741 224 aa9.51□□□□□ -0.89
PTPN7-216ENST00000492977 CXCL5P42830 114 aa9.51□□□□□ -0.89
PTPN7-216ENST00000492977 NBEAL1Q6ZS30 2694 aa9.51□□□□□ -0.89
PTPN7-216ENST00000492977 LOC107984156A0A0G2JMH3 177 aa9.5□□□□□ -0.89
PTPN7-216ENST00000492977 KIAA0087Q14695 138 aa9.5□□□□□ -0.89
PTPN7-216ENST00000492977 ARL17AQ8IVW1 177 aa9.5□□□□□ -0.89
PTPN7-216ENST00000492977 KLK5Q9Y337 293 aaPredicted RBP9.5□□□□□ -0.89
PTPN7-216ENST00000492977 LINC00158P58513 81 aa9.5□□□□□ -0.89
PTPN7-216ENST00000492977 CKS1BP61024 79 aa9.5□□□□□ -0.89
PTPN7-216ENST00000492977 MGAM2Q2M2H8 2515 aa9.5□□□□□ -0.89
PTPN7-216ENST00000492977 LINC01556Q5JQF7 62 aa9.5□□□□□ -0.89
PTPN7-216ENST00000492977 CFAP161Q6P656 301 aa9.5□□□□□ -0.89
PTPN7-216ENST00000492977 SOSTDC1Q6X4U4 206 aa9.5□□□□□ -0.89
PTPN7-216ENST00000492977 UBE2WQ96B02 151 aa9.5□□□□□ -0.89
PTPN7-216ENST00000492977 MIR7-3HGQ8N6C7 128 aa9.49□□□□□ -0.89
PTPN7-216ENST00000492977 TRBV20-1A0A075B6N2 111 aa9.48□□□□□ -0.89
PTPN7-216ENST00000492977 B9D2Q9BPU9 175 aa9.48□□□□□ -0.89
PTPN7-216ENST00000492977 PSMB2P49721 201 aa9.47□□□□□ -0.89
PTPN7-216ENST00000492977 Q1RN00 199 aa9.47□□□□□ -0.89
PTPN7-216ENST00000492977 TRBV30A0A0K0K1B3 111 aa9.46□□□□□ -0.89
PTPN7-216ENST00000492977 H3BMG7 143 aa9.46□□□□□ -0.89
PTPN7-216ENST00000492977 H7C2G1 150 aa9.46□□□□□ -0.89
PTPN7-216ENST00000492977 SCGB1C2P0DMR2 95 aa9.46□□□□□ -0.89
PTPN7-216ENST00000492977 C2orf82Q6UX34 121 aa9.46□□□□□ -0.89
PTPN7-216ENST00000492977 DNAH10OSP0CZ25 163 aa9.46□□□□□ -0.9
PTPN7-216ENST00000492977 PFN2P35080 140 aa9.46□□□□□ -0.9
PTPN7-216ENST00000492977 COX17Q14061 63 aa9.46□□□□□ -0.9
PTPN7-216ENST00000492977 F8W1H4 67 aa9.45□□□□□ -0.9
PTPN7-216ENST00000492977 RPL13AP40429 203 aaKnown RBP9.44□□□□□ -0.9
PTPN7-216ENST00000492977 CCL18P55774 89 aa9.44□□□□□ -0.9
PTPN7-216ENST00000492977 SPAG11BQ08648 103 aa9.44□□□□□ -0.9
PTPN7-216ENST00000492977 KRTAP26-1Q6PEX3 210 aa9.43□□□□□ -0.9
PTPN7-216ENST00000492977 SND1-IT1Q9HBX3 110 aa9.43□□□□□ -0.9
PTPN7-216ENST00000492977 LINC00588Q9Y4M8 146 aa9.43□□□□□ -0.9
PTPN7-216ENST00000492977 TCL1BO95988 128 aa9.42□□□□□ -0.9
PTPN7-216ENST00000492977 COX6CP09669 75 aa9.42□□□□□ -0.9
PTPN7-216ENST00000492977 TRAV13-2A0A0B4J235 113 aa9.41□□□□□ -0.9
PTPN7-216ENST00000492977 TRIAP1O43715 76 aa9.41□□□□□ -0.9
PTPN7-216ENST00000492977 MUC7Q8TAX7 377 aa9.41□□□□□ -0.9
PTPN7-216ENST00000492977 C1orf43Q9BWL3 253 aa9.41□□□□□ -0.9
PTPN7-216ENST00000492977 NHLRC4P0CG21 123 aaPredicted RBP9.41□□□□□ -0.9
PTPN7-216ENST00000492977 K7ERU9 68 aa9.4□□□□□ -0.9
PTPN7-216ENST00000492977 UPK3BQ9BT76 320 aa9.4□□□□□ -0.9
PTPN7-216ENST00000492977 PRO0461Q9UI25 63 aa9.4□□□□□ -0.9
PTPN7-216ENST00000492977 HUWE1Q7Z6Z7 4374 aaKnown RBP9.4□□□□□ -0.91
PTPN7-216ENST00000492977 GVQW2A0A096LPI5 108 aaPredicted RBP9.39□□□□□ -0.91
PTPN7-216ENST00000492977 UNQ6190/PRO20217Q6UXQ8 127 aa9.39□□□□□ -0.91
PTPN7-216ENST00000492977 C6orf223Q8N319 242 aa9.39□□□□□ -0.91
PTPN7-216ENST00000492977 NTN5Q8WTR8 489 aaPredicted RBP9.39□□□□□ -0.91
PTPN7-216ENST00000492977 IGKV2-28A0A075B6P5 120 aa9.38□□□□□ -0.91
PTPN7-216ENST00000492977 IGKV2D-28P01615 120 aa9.38□□□□□ -0.91
PTPN7-216ENST00000492977 ATXN8Q156A1 80 aa9.38□□□□□ -0.91
PTPN7-216ENST00000492977 OCIAD2Q56VL3 154 aa9.38□□□□□ -0.91
PTPN7-216ENST00000492977 WFDC2Q14508 124 aa9.37□□□□□ -0.91
PTPN7-216ENST00000492977 C10orf25Q5T742 122 aa9.37□□□□□ -0.91
PTPN7-216ENST00000492977 IGKV2D-24A0A075B6R9 120 aa9.37□□□□□ -0.91
PTPN7-216ENST00000492977 C9orf116Q5BN46 136 aaPredicted RBP9.37□□□□□ -0.91
PTPN7-216ENST00000492977 LINC00337Q8N6G1 96 aa9.37□□□□□ -0.91
PTPN7-216ENST00000492977 VPS25Q9BRG1 176 aa9.37□□□□□ -0.91
PTPN7-216ENST00000492977 F8WDY8 70 aa9.36□□□□□ -0.91
PTPN7-216ENST00000492977 NDUFC2O95298 119 aa9.36□□□□□ -0.91
PTPN7-216ENST00000492977 RNF151Q2KHN1 245 aa9.36□□□□□ -0.91
PTPN7-216ENST00000492977 LINC00526Q96FQ7 95 aa9.36□□□□□ -0.91
PTPN7-216ENST00000492977 C15orf56Q8N910 161 aa9.35□□□□□ -0.91
PTPN7-216ENST00000492977 C2orf48Q96LS8 159 aa9.35□□□□□ -0.91
PTPN7-216ENST00000492977 MTURNQ8N3F0 131 aa9.34□□□□□ -0.91
PTPN7-216ENST00000492977 RPL28P46779 137 aaKnown RBP9.33□□□□□ -0.92
PTPN7-216ENST00000492977 RMI2Q96E14 147 aa9.33□□□□□ -0.92
PTPN7-216ENST00000492977 Q9HAA7 133 aa9.33□□□□□ -0.92
PTPN7-216ENST00000492977 M0QXV9 152 aa9.33□□□□□ -0.92
PTPN7-216ENST00000492977 LINC01620Q4KN68 170 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms