RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 TMEM86BQ8N661 226 aa10.69□□□□□ -0.7
TNFRSF1B-203ENST00000492361 TRAV13-2A0A0B4J235 113 aa10.69□□□□□ -0.7
TNFRSF1B-203ENST00000492361 A8MTW9 85 aa10.68□□□□□ -0.7
TNFRSF1B-203ENST00000492361 HERV-K104P63124 156 aa10.68□□□□□ -0.7
TNFRSF1B-203ENST00000492361 KRTAP1-3Q8IUG1 177 aa10.68□□□□□ -0.7
TNFRSF1B-203ENST00000492361 INAFM1C9JVW0 142 aa10.68□□□□□ -0.7
TNFRSF1B-203ENST00000492361 S100A7L2Q5SY68 101 aa10.68□□□□□ -0.7
TNFRSF1B-203ENST00000492361 IGLV5-39A0A0G2JS06 123 aa10.67□□□□□ -0.7
TNFRSF1B-203ENST00000492361 IGLV1-51P01701 117 aa10.67□□□□□ -0.7
TNFRSF1B-203ENST00000492361 LINC00959A0A1B0GUT2 108 aa10.67□□□□□ -0.7
TNFRSF1B-203ENST00000492361 SDIM1Q6ZPB5 146 aa10.66□□□□□ -0.7
TNFRSF1B-203ENST00000492361 TRBV6-4A0A1B0GX49 114 aa10.66□□□□□ -0.7
TNFRSF1B-203ENST00000492361 KLK12Q9UKR0 248 aa10.66□□□□□ -0.7
TNFRSF1B-203ENST00000492361 OTOGQ6ZRI0 2925 aa10.66□□□□□ -0.7
TNFRSF1B-203ENST00000492361 LRRC75A-AS1Q8N1F1 130 aa10.65□□□□□ -0.7
TNFRSF1B-203ENST00000492361 COL6A5A8TX70 2615 aa10.65□□□□□ -0.71
TNFRSF1B-203ENST00000492361 TIMM17BO60830 172 aa10.64□□□□□ -0.71
TNFRSF1B-203ENST00000492361 SMIM20Q8N5G0 67 aa10.64□□□□□ -0.71
TNFRSF1B-203ENST00000492361 FAM110AQ9BQ89 295 aa10.64□□□□□ -0.71
TNFRSF1B-203ENST00000492361 EDA2RQ9HAV5 297 aa10.64□□□□□ -0.71
TNFRSF1B-203ENST00000492361 J3QKU1 62 aa10.63□□□□□ -0.71
TNFRSF1B-203ENST00000492361 PLAC8L1A1L4L8 177 aa10.63□□□□□ -0.71
TNFRSF1B-203ENST00000492361 XAGE1AQ9HD64 81 aa10.63□□□□□ -0.71
TNFRSF1B-203ENST00000492361 CMC4P56277 68 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF1B-203ENST00000492361 IGLV5-45A0A087WSX0 123 aa10.62□□□□□ -0.71
TNFRSF1B-203ENST00000492361 C6orf223Q8N319 242 aa10.62□□□□□ -0.71
TNFRSF1B-203ENST00000492361 PRO0255Q9UI72 69 aa10.62□□□□□ -0.71
TNFRSF1B-203ENST00000492361 C9orf129Q5T035 196 aaKnown RBP10.62□□□□□ -0.71
TNFRSF1B-203ENST00000492361 AKAP9Q99996 3911 aa10.62□□□□□ -0.71
TNFRSF1B-203ENST00000492361 WFDC9Q8NEX5 89 aa10.61□□□□□ -0.71
TNFRSF1B-203ENST00000492361 IGKV2-28A0A075B6P5 120 aa10.61□□□□□ -0.71
TNFRSF1B-203ENST00000492361 IGHV3OR16-9A0A0B4J2B5 98 aa10.61□□□□□ -0.71
TNFRSF1B-203ENST00000492361 IGKV2D-28P01615 120 aa10.61□□□□□ -0.71
TNFRSF1B-203ENST00000492361 CHCHD10Q8WYQ3 142 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF1B-203ENST00000492361 LAMTOR3Q9UHA4 124 aa10.6□□□□□ -0.71
TNFRSF1B-203ENST00000492361 LY6G6DO95868 133 aa10.6□□□□□ -0.71
TNFRSF1B-203ENST00000492361 CITED1Q99966 193 aa10.6□□□□□ -0.71
TNFRSF1B-203ENST00000492361 BAHCC1Q9P281 2608 aa10.6□□□□□ -0.71
TNFRSF1B-203ENST00000492361 A0A087WVE0 104 aa10.59□□□□□ -0.71
TNFRSF1B-203ENST00000492361 HIGD2BQ4VC39 106 aa10.59□□□□□ -0.71
TNFRSF1B-203ENST00000492361 REG3AQ06141 175 aa10.59□□□□□ -0.71
TNFRSF1B-203ENST00000492361 NHLRC4P0CG21 123 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF1B-203ENST00000492361 RPL18AQ02543 176 aaKnown RBP10.58□□□□□ -0.72
TNFRSF1B-203ENST00000492361 IGHV4-28A0A0C4DH34 117 aa10.58□□□□□ -0.72
TNFRSF1B-203ENST00000492361 C9orf153Q5TBE3 101 aa10.58□□□□□ -0.72
TNFRSF1B-203ENST00000492361 CSDC2Q9Y534 153 aaKnown RBP10.58□□□□□ -0.72
TNFRSF1B-203ENST00000492361 C19orf73Q9NVV2 129 aa10.57□□□□□ -0.72
TNFRSF1B-203ENST00000492361 NSD1Q96L73 2696 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF1B-203ENST00000492361 KRTAP10-3P60369 221 aa10.57□□□□□ -0.72
TNFRSF1B-203ENST00000492361 SMCR5Q8TEV8 140 aa10.57□□□□□ -0.72
TNFRSF1B-203ENST00000492361 INAFM2P0DMQ5 153 aa10.57□□□□□ -0.72
TNFRSF1B-203ENST00000492361 UNQ6190/PRO20217Q6UXQ8 127 aa10.57□□□□□ -0.72
TNFRSF1B-203ENST00000492361 CELA1Q9UNI1 258 aa10.56□□□□□ -0.72
TNFRSF1B-203ENST00000492361 FBN1P35555 2871 aaKnown RBP10.56□□□□□ -0.72
TNFRSF1B-203ENST00000492361 A0A087WZ39 114 aa10.56□□□□□ -0.72
TNFRSF1B-203ENST00000492361 HILS1P60008 231 aa10.56□□□□□ -0.72
TNFRSF1B-203ENST00000492361 C6orf99Q4VX62 202 aa10.56□□□□□ -0.72
TNFRSF1B-203ENST00000492361 SHISA2Q6UWI4 295 aa10.56□□□□□ -0.72
TNFRSF1B-203ENST00000492361 RETNQ9HD89 108 aa10.56□□□□□ -0.72
TNFRSF1B-203ENST00000492361 CSNK1G2-AS1Q8NCQ2 148 aa10.56□□□□□ -0.72
TNFRSF1B-203ENST00000492361 PKD1L1Q8TDX9 2849 aa10.56□□□□□ -0.72
TNFRSF1B-203ENST00000492361 SPAG11BQ08648 103 aa10.55□□□□□ -0.72
TNFRSF1B-203ENST00000492361 IBA57-AS1B1ANH7 110 aa10.54□□□□□ -0.72
TNFRSF1B-203ENST00000492361 TRACP01848 142 aa10.54□□□□□ -0.72
TNFRSF1B-203ENST00000492361 CXCL5P42830 114 aa10.54□□□□□ -0.72
TNFRSF1B-203ENST00000492361 ORMDL1Q9P0S3 153 aa10.54□□□□□ -0.72
TNFRSF1B-203ENST00000492361 OXLD1Q5BKU9 147 aa10.53□□□□□ -0.72
TNFRSF1B-203ENST00000492361 KLK5Q9Y337 293 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF1B-203ENST00000492361 IL17DQ8TAD2 202 aa10.52□□□□□ -0.72
TNFRSF1B-203ENST00000492361 C10orf25Q5T742 122 aa10.52□□□□□ -0.73
TNFRSF1B-203ENST00000492361 HAMPP81172 84 aa10.51□□□□□ -0.73
TNFRSF1B-203ENST00000492361 KRTAP1-1Q07627 177 aa10.51□□□□□ -0.73
TNFRSF1B-203ENST00000492361 OVOL2Q9BRP0 275 aa10.51□□□□□ -0.73
TNFRSF1B-203ENST00000492361 PRB2P02812 416 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF1B-203ENST00000492361 RPL28P46779 137 aaKnown RBP10.51□□□□□ -0.73
TNFRSF1B-203ENST00000492361 MRPL23Q16540 153 aaKnown RBP10.51□□□□□ -0.73
TNFRSF1B-203ENST00000492361 X6R8D5 127 aa10.51□□□□□ -0.73
TNFRSF1B-203ENST00000492361 TRRAPQ9Y4A5 3859 aa10.5□□□□□ -0.73
TNFRSF1B-203ENST00000492361 H0YGX0 51 aa10.5□□□□□ -0.73
TNFRSF1B-203ENST00000492361 LINC00643Q86TS7 51 aa10.5□□□□□ -0.73
TNFRSF1B-203ENST00000492361 LINC00846Q9NV44 126 aa10.5□□□□□ -0.73
TNFRSF1B-203ENST00000492361 A0A1B0GX51 115 aa10.49□□□□□ -0.73
TNFRSF1B-203ENST00000492361 APOC4P55056 127 aa10.48□□□□□ -0.73
TNFRSF1B-203ENST00000492361 C9orf66Q5T8R8 295 aa10.48□□□□□ -0.73
TNFRSF1B-203ENST00000492361 TRAV23DV6A0A075B6W5 121 aa10.47□□□□□ -0.73
TNFRSF1B-203ENST00000492361 SPART-AS1P0CW21 52 aa10.47□□□□□ -0.73
TNFRSF1B-203ENST00000492361 ZNF561-AS1K7EIQ3 104 aa10.47□□□□□ -0.73
TNFRSF1B-203ENST00000492361 SCXQ7RTU7 201 aa10.47□□□□□ -0.73
TNFRSF1B-203ENST00000492361 CYSRT1A8MQ03 144 aa10.47□□□□□ -0.73
TNFRSF1B-203ENST00000492361 MRAPQ8TCY5 172 aa10.47□□□□□ -0.73
TNFRSF1B-203ENST00000492361 DEFB105AQ8NG35 78 aa10.46□□□□□ -0.73
TNFRSF1B-203ENST00000492361 ACYP1P07311 99 aa10.46□□□□□ -0.74
TNFRSF1B-203ENST00000492361 CD164L2Q6UWJ8 174 aa10.45□□□□□ -0.74
TNFRSF1B-203ENST00000492361 IGKV2D-24A0A075B6R9 120 aa10.45□□□□□ -0.74
TNFRSF1B-203ENST00000492361 IGHV4-30-4P0DP06 118 aa10.45□□□□□ -0.74
TNFRSF1B-203ENST00000492361 TMEM126AQ9H061 195 aa10.45□□□□□ -0.74
TNFRSF1B-203ENST00000492361 hADV29S1A0JD25 119 aa10.44□□□□□ -0.74
TNFRSF1B-203ENST00000492361 M0QXV9 152 aa10.44□□□□□ -0.74
TNFRSF1B-203ENST00000492361 CAMK2N2Q96S95 79 aa10.44□□□□□ -0.74
TNFRSF1B-203ENST00000492361 C16orf95Q9H693 158 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms