RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 PSORS1C2Q9UIG4 136 aa16.74■□□□□ 0.27
SH3GL3-204ENST00000492099 NDUFC2-KCTD14E9PQ53 114 aa16.73■□□□□ 0.27
SH3GL3-204ENST00000492099 CKS1BP61024 79 aa16.73■□□□□ 0.27
SH3GL3-204ENST00000492099 FA2HQ7L5A8 372 aa16.72■□□□□ 0.27
SH3GL3-204ENST00000492099 FAM168BA1KXE4 195 aa16.71■□□□□ 0.27
SH3GL3-204ENST00000492099 SMCO4Q9NRQ5 59 aa16.71■□□□□ 0.27
SH3GL3-204ENST00000492099 PLA2G2DQ9UNK4 145 aa16.71■□□□□ 0.27
SH3GL3-204ENST00000492099 HMCN2Q8NDA2 5059 aa16.69■□□□□ 0.26
SH3GL3-204ENST00000492099 FAM19A5Q7Z5A7 132 aaPredicted RBP16.69■□□□□ 0.26
SH3GL3-204ENST00000492099 TINCRA0A1B0GVN0 87 aa16.68■□□□□ 0.26
SH3GL3-204ENST00000492099 C1orf137Q5JT78 98 aa16.68■□□□□ 0.26
SH3GL3-204ENST00000492099 LINC00469Q8N7U9 141 aa16.67■□□□□ 0.26
SH3GL3-204ENST00000492099 CST9LQ9H4G1 147 aa16.66■□□□□ 0.26
SH3GL3-204ENST00000492099 APOC3P02656 99 aa16.65■□□□□ 0.26
SH3GL3-204ENST00000492099 NDUFA5Q16718 116 aa16.65■□□□□ 0.26
SH3GL3-204ENST00000492099 TRAPPC1Q9Y5R8 145 aa16.65■□□□□ 0.26
SH3GL3-204ENST00000492099 F8VRH5 84 aa16.64■□□□□ 0.25
SH3GL3-204ENST00000492099 CXCL5P42830 114 aa16.64■□□□□ 0.25
SH3GL3-204ENST00000492099 PMVKQ15126 192 aa16.64■□□□□ 0.25
SH3GL3-204ENST00000492099 C9orf129Q5T035 196 aaKnown RBP16.64■□□□□ 0.25
SH3GL3-204ENST00000492099 IGLV5-45A0A087WSX0 123 aa16.63■□□□□ 0.25
SH3GL3-204ENST00000492099 SNAPINO95295 136 aa16.63■□□□□ 0.25
SH3GL3-204ENST00000492099 KRTAP7-1Q8IUC3 87 aa16.63■□□□□ 0.25
SH3GL3-204ENST00000492099 SMIM1B2RUZ4 78 aa16.62■□□□□ 0.25
SH3GL3-204ENST00000492099 M0QXV9 152 aa16.62■□□□□ 0.25
SH3GL3-204ENST00000492099 PDZD11Q5EBL8 140 aa16.62■□□□□ 0.25
SH3GL3-204ENST00000492099 SVBPQ8N300 66 aa16.62■□□□□ 0.25
SH3GL3-204ENST00000492099 IGLV7-43P04211 117 aa16.59■□□□□ 0.25
SH3GL3-204ENST00000492099 LINC00614P0C842 121 aa16.59■□□□□ 0.25
SH3GL3-204ENST00000492099 KRTAP10-8P60410 259 aa16.59■□□□□ 0.25
SH3GL3-204ENST00000492099 C18orf32Q8TCD1 76 aa16.59■□□□□ 0.25
SH3GL3-204ENST00000492099 TNXBP22105 4242 aa16.59■□□□□ 0.25
SH3GL3-204ENST00000492099 UBE2BP63146 152 aa16.58■□□□□ 0.24
SH3GL3-204ENST00000492099 KRTAP11-1Q8IUC1 163 aa16.58■□□□□ 0.24
SH3GL3-204ENST00000492099 COX7B2Q8TF08 81 aa16.58■□□□□ 0.24
SH3GL3-204ENST00000492099 DIRC1Q969H9 104 aa16.55■□□□□ 0.24
SH3GL3-204ENST00000492099 URB1-AS1Q96HZ7 61 aa16.55■□□□□ 0.24
SH3GL3-204ENST00000492099 A0A096LNJ9 63 aa16.54■□□□□ 0.24
SH3GL3-204ENST00000492099 H3BRM9 83 aa16.54■□□□□ 0.24
SH3GL3-204ENST00000492099 RAB5BP61020 215 aa16.54■□□□□ 0.24
SH3GL3-204ENST00000492099 XAGE1AQ9HD64 81 aa16.54■□□□□ 0.24
SH3GL3-204ENST00000492099 HBDP02042 147 aa16.53■□□□□ 0.24
SH3GL3-204ENST00000492099 SPINK8P0C7L1 97 aa16.53■□□□□ 0.24
SH3GL3-204ENST00000492099 IGLC3P0DOY3 106 aa16.51■□□□□ 0.23
SH3GL3-204ENST00000492099 NDUFA6P56556 154 aa16.51■□□□□ 0.23
SH3GL3-204ENST00000492099 ODF1Q14990 250 aa16.51■□□□□ 0.23
SH3GL3-204ENST00000492099 C22orf24Q9Y442 160 aa16.5■□□□□ 0.23
SH3GL3-204ENST00000492099 LBHQ53QV2 105 aaPredicted RBP16.49■□□□□ 0.23
SH3GL3-204ENST00000492099 PMCHL1Q16048 86 aa16.48■□□□□ 0.23
SH3GL3-204ENST00000492099 H0Y9J4 135 aa16.47■□□□□ 0.23
SH3GL3-204ENST00000492099 ATP5LO75964 103 aa16.47■□□□□ 0.23
SH3GL3-204ENST00000492099 TP73-AS1Q9UF72 201 aa16.46■□□□□ 0.23
SH3GL3-204ENST00000492099 YPEL4Q96NS1 127 aa16.45■□□□□ 0.22
SH3GL3-204ENST00000492099 IGLV5-39A0A0G2JS06 123 aa16.43■□□□□ 0.22
SH3GL3-204ENST00000492099 ZNF22P17026 224 aaPredicted RBP16.43■□□□□ 0.22
SH3GL3-204ENST00000492099 NUPR1O60356 82 aa16.42■□□□□ 0.22
SH3GL3-204ENST00000492099 MRPL55Q7Z7F7 128 aaKnown RBP16.42■□□□□ 0.22
SH3GL3-204ENST00000492099 BAGE3Q86Y29 109 aa16.42■□□□□ 0.22
SH3GL3-204ENST00000492099 CHCHD1Q96BP2 118 aaKnown RBP16.39■□□□□ 0.21
SH3GL3-204ENST00000492099 ZNF861PO60384 105 aa16.37■□□□□ 0.21
SH3GL3-204ENST00000492099 C11orf86A6NJI1 115 aa16.36■□□□□ 0.21
SH3GL3-204ENST00000492099 UBR4Q5T4S7 5183 aa16.36■□□□□ 0.21
SH3GL3-204ENST00000492099 TMEM170BQ5T4T1 132 aa16.35■□□□□ 0.21
SH3GL3-204ENST00000492099 PRR26Q8N8Z3 221 aa16.35■□□□□ 0.21
SH3GL3-204ENST00000492099 LINC00167Q96N53 147 aa16.34■□□□□ 0.21
SH3GL3-204ENST00000492099 CHTOPQ9Y3Y2 248 aaKnown RBP16.34■□□□□ 0.21
SH3GL3-204ENST00000492099 IGLV1-50A0A075B6I6 118 aa16.33■□□□□ 0.2
SH3GL3-204ENST00000492099 IGLV5-37A0A075B6J1 123 aa16.33■□□□□ 0.2
SH3GL3-204ENST00000492099 PFN2P35080 140 aa16.33■□□□□ 0.2
SH3GL3-204ENST00000492099 SFTA2Q6UW10 78 aa16.33■□□□□ 0.2
SH3GL3-204ENST00000492099 KRTAP1-4P0C5Y4 121 aa16.32■□□□□ 0.2
SH3GL3-204ENST00000492099 CBLN2Q8IUK8 224 aa16.32■□□□□ 0.2
SH3GL3-204ENST00000492099 NKAPP1Q8N9T2 125 aa16.32■□□□□ 0.2
SH3GL3-204ENST00000492099 IFI27L1Q96BM0 104 aa16.32■□□□□ 0.2
SH3GL3-204ENST00000492099 TRAV12-1A0A0B4J245 112 aa16.31■□□□□ 0.2
SH3GL3-204ENST00000492099 COX17Q14061 63 aa16.31■□□□□ 0.2
SH3GL3-204ENST00000492099 ERG28Q9UKR5 140 aa16.31■□□□□ 0.2
SH3GL3-204ENST00000492099 BCE1O60756 84 aa16.3■□□□□ 0.2
SH3GL3-204ENST00000492099 RPL37AP8A6NKH3 93 aa16.29■□□□□ 0.2
SH3GL3-204ENST00000492099 RPL28P46779 137 aaKnown RBP16.28■□□□□ 0.2
SH3GL3-204ENST00000492099 GAGE10A6NGK3 116 aa16.27■□□□□ 0.2
SH3GL3-204ENST00000492099 SLC7A5P1Q8MH63 180 aa16.27■□□□□ 0.2
SH3GL3-204ENST00000492099 HSBP1O75506 76 aa16.26■□□□□ 0.19
SH3GL3-204ENST00000492099 ZNF625Q96I27 306 aaPredicted RBP16.26■□□□□ 0.19
SH3GL3-204ENST00000492099 SND1-IT1Q9HBX3 110 aa16.26■□□□□ 0.19
SH3GL3-204ENST00000492099 RPL13AP40429 203 aaKnown RBP16.25■□□□□ 0.19
SH3GL3-204ENST00000492099 TRGC2P03986 189 aa16.24■□□□□ 0.19
SH3GL3-204ENST00000492099 TMEM223A0PJW6 202 aa16.23■□□□□ 0.19
SH3GL3-204ENST00000492099 RPL24P83731 157 aaKnown RBP16.22■□□□□ 0.19
SH3GL3-204ENST00000492099 FAM19A2Q8N3H0 131 aa16.22■□□□□ 0.19
SH3GL3-204ENST00000492099 VPREB1P12018 145 aa16.2■□□□□ 0.18
SH3GL3-204ENST00000492099 LRP2P98164 4655 aa16.19■□□□□ 0.18
SH3GL3-204ENST00000492099 IGKV2-28A0A075B6P5 120 aa16.17■□□□□ 0.18
SH3GL3-204ENST00000492099 SCO1O75880 301 aa16.17■□□□□ 0.18
SH3GL3-204ENST00000492099 IGKV2D-28P01615 120 aa16.17■□□□□ 0.18
SH3GL3-204ENST00000492099 LINC00158P58513 81 aa16.17■□□□□ 0.18
SH3GL3-204ENST00000492099 UBE2AP49459 152 aa16.16■□□□□ 0.18
SH3GL3-204ENST00000492099 SERF1AO75920 110 aa16.14■□□□□ 0.17
SH3GL3-204ENST00000492099 LEPROTL1O95214 131 aa16.14■□□□□ 0.17
SH3GL3-204ENST00000492099 KRTAP13-1Q8IUC0 172 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms