RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 KLK5Q9Y337 293 aaPredicted RBP1.28□□□□□ -2.2
HMGN1-218ENST00000490032 PRR14LQ5THK1 2151 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 DNAH14Q0VDD8 3507 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 DNAH12Q6ZR08 3092 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 TEP1Q99973 2627 aaKnown RBP1.27□□□□□ -2.21
HMGN1-218ENST00000490032 ABCA2Q9BZC7 2435 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 CACNA1EQ15878 2313 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 FREM3P0C091 2139 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 DYSFO75923 2080 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 C2orf16Q68DN1 1984 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 KIAA1549LQ6ZVL6 1849 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 hDV103S1A0JD37 113 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 C5orf63A6NC05 138 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 F8WEM9 126 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 CHKB-CPT1BH3BT56 60 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 K7ERJ3 54 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 IGKV1-39P01597 117 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 IGKV1D-39P04432 117 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 MGPP08493 103 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 SAA2P0DJI9 122 aaPredicted RBP1.27□□□□□ -2.21
HMGN1-218ENST00000490032 MYCNOSP40205 109 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 RPL27AP46776 148 aaKnown RBP1.27□□□□□ -2.21
HMGN1-218ENST00000490032 UBE2E1P51965 193 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 CMC4P56277 68 aaPredicted RBP1.27□□□□□ -2.21
HMGN1-218ENST00000490032 NREPQ16612 68 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 MIAQ16674 131 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 Q5XG85 94 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 FAM19A3Q7Z5A8 133 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 Q86TA4 180 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 TMEM167AQ8TBQ9 72 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 UPK3BQ9BT76 320 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 CNFNQ9BYD5 112 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 NDUFA12Q9UI09 145 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 SNRNP200O75643 2136 aaKnown RBP1.27□□□□□ -2.21
HMGN1-218ENST00000490032 ARHGAP32A7KAX9 2087 aa1.27□□□□□ -2.21
HMGN1-218ENST00000490032 DMXL1Q9Y485 3027 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 AHCTF1Q8WYP5 2266 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 IGKV2D-26A0A0A0MRZ7 120 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 TRBV6-8A0A0A6YYG3 113 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 TRAV12-3A0A0B4J271 114 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 IGHV3OR16-9A0A0B4J2B5 98 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 IGKV3D-7A0A0C4DH55 119 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 IGKV1-8A0A0C4DH67 115 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 A6NED7 52 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 IBA57-AS1B1ANH7 110 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 C8orf87E5RJ46 101 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 M0R1W7 72 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 PSPHP1O15172 72 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 TRGV3P03979 118 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 SPTBP11277 2137 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 COX17Q14061 63 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 NNATQ16517 81 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 GDF5OSQ5U4N7 250 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 C7orf65Q6ZTY9 151 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 FAM19A1Q7Z5A9 133 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 LINC00269Q8N2A0 174 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 Q8N6K4 173 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 WFDC9Q8NEX5 89 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 SPTSSBQ8NFR3 76 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 FAM167A-AS1Q96KT0 104 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 HIGD2AQ9BW72 106 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 UBE2D4Q9Y2X8 147 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 MYOFQ9NZM1 2061 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 WDR87Q6ZQQ6 2873 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 MYO15AQ9UKN7 3530 aa1.26□□□□□ -2.21
HMGN1-218ENST00000490032 SDK1Q7Z5N4 2213 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 ASCC3Q8N3C0 2202 aaKnown RBP1.25□□□□□ -2.21
HMGN1-218ENST00000490032 MYO7BQ6PIF6 2116 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 PCNX1Q96RV3 2341 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 IGKV1-27A0A075B6S5 117 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 IGKV1-6A0A0C4DH72 117 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 IGKV1-12A0A0C4DH73 117 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 TRBV6-5A0A0K0K1A5 114 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 DEFB108AA8MXU0 73 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 C4orf51C9J302 202 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 K7EMT4 169 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 M0R378 163 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 NDUFA1O15239 70 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 ZNF73O43830 326 aaPredicted RBP1.25□□□□□ -2.21
HMGN1-218ENST00000490032 IGKV1D-12P01611 117 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 IGHV3-30-3P0DP02 117 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 CCL3L1P16619 93 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 EFNA4P52798 201 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 LINC00158P58513 81 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 C9orf116Q5BN46 136 aaPredicted RBP1.25□□□□□ -2.21
HMGN1-218ENST00000490032 SPINK9Q5DT21 86 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 RNASE13Q5GAN3 156 aaKnown RBP1.25□□□□□ -2.21
HMGN1-218ENST00000490032 LYPD5Q6UWN5 251 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 ENHOQ6UWT2 76 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 CASC2Q6XLA1 102 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 C16orf47Q6ZP98 133 aaPredicted RBP1.25□□□□□ -2.21
HMGN1-218ENST00000490032 ADM2Q7Z4H4 148 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 VMO1Q7Z5L0 202 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 C3orf56Q8N813 242 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 TMEM254Q8TBM7 123 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 DIRC1Q969H9 104 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 AMELXQ99217 191 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 RBM12B-AS1Q9P1G2 102 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 DOPEY2Q9Y3R5 2298 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms