RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 FAM19A3Q7Z5A8 133 aa7.44□□□□□ -1.22
COL21A1-211ENST00000488912 LINC00269Q8N2A0 174 aa7.44□□□□□ -1.22
COL21A1-211ENST00000488912 IGHV3-30P01768 117 aa7.44□□□□□ -1.22
COL21A1-211ENST00000488912 IGHV3-33P01772 117 aa7.44□□□□□ -1.22
COL21A1-211ENST00000488912 IGHV3-30-3P0DP02 117 aa7.44□□□□□ -1.22
COL21A1-211ENST00000488912 IGHV3-30-5P0DP03 117 aa7.44□□□□□ -1.22
COL21A1-211ENST00000488912 CDKN2A-AS1Q9UH64 79 aa7.43□□□□□ -1.22
COL21A1-211ENST00000488912 LINC00588Q9Y4M8 146 aa7.43□□□□□ -1.22
COL21A1-211ENST00000488912 LYSTQ99698 3801 aa7.43□□□□□ -1.22
COL21A1-211ENST00000488912 IGLV5-45A0A087WSX0 123 aa7.43□□□□□ -1.22
COL21A1-211ENST00000488912 LINC00959A0A1B0GUT2 108 aa7.43□□□□□ -1.22
COL21A1-211ENST00000488912 TMEM223A0PJW6 202 aa7.43□□□□□ -1.22
COL21A1-211ENST00000488912 RPL13AP40429 203 aaKnown RBP7.43□□□□□ -1.22
COL21A1-211ENST00000488912 HERVK_113P63121 156 aa7.43□□□□□ -1.22
COL21A1-211ENST00000488912 SLC25A20O43772 301 aa7.42□□□□□ -1.22
COL21A1-211ENST00000488912 HERVK_113P61574 105 aa7.42□□□□□ -1.22
COL21A1-211ENST00000488912 REG3AQ06141 175 aa7.42□□□□□ -1.22
COL21A1-211ENST00000488912 PLEKHB2Q96CS7 222 aa7.42□□□□□ -1.22
COL21A1-211ENST00000488912 KLK12Q9UKR0 248 aa7.42□□□□□ -1.22
COL21A1-211ENST00000488912 STARD9Q9P2P6 4700 aa7.42□□□□□ -1.22
COL21A1-211ENST00000488912 TGP01266 2768 aa7.42□□□□□ -1.22
COL21A1-211ENST00000488912 IGHV3-64A0A075B6Q5 118 aa7.41□□□□□ -1.22
COL21A1-211ENST00000488912 NUPR2A6NF83 97 aa7.41□□□□□ -1.22
COL21A1-211ENST00000488912 CCL18P55774 89 aa7.41□□□□□ -1.22
COL21A1-211ENST00000488912 APLNQ9ULZ1 77 aa7.41□□□□□ -1.22
COL21A1-211ENST00000488912 PLECQ15149 4684 aaKnown RBP7.41□□□□□ -1.22
COL21A1-211ENST00000488912 TRAV8-3A0A0A6YYJ7 113 aa7.4□□□□□ -1.22
COL21A1-211ENST00000488912 SFTA2Q6UW10 78 aa7.4□□□□□ -1.22
COL21A1-211ENST00000488912 SPANXDQ9BXN6 97 aa7.4□□□□□ -1.22
COL21A1-211ENST00000488912 A0A1B0GX51 115 aa7.4□□□□□ -1.23
COL21A1-211ENST00000488912 XCL1P47992 114 aa7.4□□□□□ -1.23
COL21A1-211ENST00000488912 TSPEAR-AS2P59090 65 aa7.4□□□□□ -1.23
COL21A1-211ENST00000488912 SS18Q15532 418 aa7.4□□□□□ -1.23
COL21A1-211ENST00000488912 LINC01556Q5JQF7 62 aa7.4□□□□□ -1.23
COL21A1-211ENST00000488912 C10orf126Q8N4M7 172 aa7.4□□□□□ -1.23
COL21A1-211ENST00000488912 PRR34Q9NV39 138 aa7.4□□□□□ -1.23
COL21A1-211ENST00000488912 SPANXCQ9NY87 97 aa7.4□□□□□ -1.23
COL21A1-211ENST00000488912 IGLV10-54A0A075B6I4 117 aa7.39□□□□□ -1.23
COL21A1-211ENST00000488912 TRAV8-4A0A0B4J246 113 aa7.39□□□□□ -1.23
COL21A1-211ENST00000488912 TRBV7-7A0A0K0K1E9 115 aa7.39□□□□□ -1.23
COL21A1-211ENST00000488912 ZNF815PA8K554 130 aa7.39□□□□□ -1.23
COL21A1-211ENST00000488912 TENM2Q9NT68 2774 aa7.39□□□□□ -1.23
COL21A1-211ENST00000488912 IGHV3OR16-9A0A0B4J2B5 98 aa7.39□□□□□ -1.23
COL21A1-211ENST00000488912 DNAH10OSP0CZ25 163 aa7.39□□□□□ -1.23
COL21A1-211ENST00000488912 ENHOQ6UWT2 76 aa7.39□□□□□ -1.23
COL21A1-211ENST00000488912 KLK5Q9Y337 293 aaPredicted RBP7.39□□□□□ -1.23
COL21A1-211ENST00000488912 IGHV1-58A0A0C4DH39 117 aa7.38□□□□□ -1.23
COL21A1-211ENST00000488912 SMIM1B2RUZ4 78 aa7.38□□□□□ -1.23
COL21A1-211ENST00000488912 RPS28P62857 69 aaKnown RBP7.38□□□□□ -1.23
COL21A1-211ENST00000488912 J3QQQ9 107 aa7.38□□□□□ -1.23
COL21A1-211ENST00000488912 LEPROTO15243 131 aa7.38□□□□□ -1.23
COL21A1-211ENST00000488912 CRPP02741 224 aa7.38□□□□□ -1.23
COL21A1-211ENST00000488912 CFC1BP0CG36 223 aa7.38□□□□□ -1.23
COL21A1-211ENST00000488912 CFC1P0CG37 223 aa7.38□□□□□ -1.23
COL21A1-211ENST00000488912 SRSF9Q13242 221 aaKnown RBP eCLIP7.38□□□□□ -1.23
COL21A1-211ENST00000488912 CHCHD10Q8WYQ3 142 aaPredicted RBP7.38□□□□□ -1.23
COL21A1-211ENST00000488912 UBE2WQ96B02 151 aa7.38□□□□□ -1.23
COL21A1-211ENST00000488912 UPK3BQ9BT76 320 aa7.38□□□□□ -1.23
COL21A1-211ENST00000488912 FAM240AA0A1B0GVK7 77 aa7.37□□□□□ -1.23
COL21A1-211ENST00000488912 C9JAW5 83 aa7.37□□□□□ -1.23
COL21A1-211ENST00000488912 C5orf38Q86SI9 138 aa7.37□□□□□ -1.23
COL21A1-211ENST00000488912 NTN5Q8WTR8 489 aaPredicted RBP7.37□□□□□ -1.23
COL21A1-211ENST00000488912 J3KT08 172 aa7.36□□□□□ -1.23
COL21A1-211ENST00000488912 SCGB1D4Q6XE38 83 aa7.36□□□□□ -1.23
COL21A1-211ENST00000488912 A0A087WZ39 114 aa7.36□□□□□ -1.23
COL21A1-211ENST00000488912 IGLV5-39A0A0G2JS06 123 aa7.36□□□□□ -1.23
COL21A1-211ENST00000488912 LGALS3P17931 250 aaKnown RBP7.36□□□□□ -1.23
COL21A1-211ENST00000488912 CD164L2Q6UWJ8 174 aa7.36□□□□□ -1.23
COL21A1-211ENST00000488912 IMUPQ9GZP8 106 aa7.36□□□□□ -1.23
COL21A1-211ENST00000488912 PRO1854Q9UHT4 67 aa7.36□□□□□ -1.23
COL21A1-211ENST00000488912 MIAQ16674 131 aa7.35□□□□□ -1.23
COL21A1-211ENST00000488912 FAM19A5Q7Z5A7 132 aaPredicted RBP7.35□□□□□ -1.23
COL21A1-211ENST00000488912 UBE2DNLQ8IWF7 75 aa7.35□□□□□ -1.23
COL21A1-211ENST00000488912 Q9H8V8 135 aa7.35□□□□□ -1.23
COL21A1-211ENST00000488912 EIF4EBP3O60516 100 aaPredicted RBP7.34□□□□□ -1.23
COL21A1-211ENST00000488912 C3orf22Q8N5N4 141 aa7.34□□□□□ -1.23
COL21A1-211ENST00000488912 TRBV10-2A0A0K0K1G8 114 aa7.34□□□□□ -1.23
COL21A1-211ENST00000488912 LINC01620Q4KN68 170 aa7.34□□□□□ -1.23
COL21A1-211ENST00000488912 DNAH1Q9P2D7 4330 aa7.34□□□□□ -1.24
COL21A1-211ENST00000488912 MUC7Q8TAX7 377 aa7.33□□□□□ -1.24
COL21A1-211ENST00000488912 LINC00526Q96FQ7 95 aa7.33□□□□□ -1.24
COL21A1-211ENST00000488912 LOC107984640A0A0U1RRK4 108 aa7.33□□□□□ -1.24
COL21A1-211ENST00000488912 COX7A2LO14548 114 aa7.33□□□□□ -1.24
COL21A1-211ENST00000488912 UQCRQO14949 82 aa7.33□□□□□ -1.24
COL21A1-211ENST00000488912 ATXN8Q156A1 80 aa7.33□□□□□ -1.24
COL21A1-211ENST00000488912 OR13C6PQ8NH95 151 aa7.33□□□□□ -1.24
COL21A1-211ENST00000488912 TEX49A0A1B0GTD5 131 aa7.32□□□□□ -1.24
COL21A1-211ENST00000488912 Q9HAA7 133 aa7.32□□□□□ -1.24
COL21A1-211ENST00000488912 NDUFA12Q9UI09 145 aa7.32□□□□□ -1.24
COL21A1-211ENST00000488912 IBA57-AS1B1ANH7 110 aa7.32□□□□□ -1.24
COL21A1-211ENST00000488912 C9orf153Q5TBE3 101 aa7.32□□□□□ -1.24
COL21A1-211ENST00000488912 KRTAP26-1Q6PEX3 210 aa7.32□□□□□ -1.24
COL21A1-211ENST00000488912 TOMM7Q9P0U1 55 aa7.32□□□□□ -1.24
COL21A1-211ENST00000488912 A0A0B4J2C4 111 aa7.31□□□□□ -1.24
COL21A1-211ENST00000488912 A4D1N5 150 aa7.31□□□□□ -1.24
COL21A1-211ENST00000488912 COX7B2Q8TF08 81 aa7.31□□□□□ -1.24
COL21A1-211ENST00000488912 WWC2-AS2Q96NR7 200 aa7.31□□□□□ -1.24
COL21A1-211ENST00000488912 MALP21145 153 aa7.3□□□□□ -1.24
COL21A1-211ENST00000488912 LINC01561Q8N1V8 128 aa7.3□□□□□ -1.24
COL21A1-211ENST00000488912 C1orf43Q9BWL3 253 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms