RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 RAB37Q96AX2 223 aa7.86□□□□□ -1.15
PRKCB-207ENST00000486868 TOMM7Q9P0U1 55 aa7.86□□□□□ -1.15
PRKCB-207ENST00000486868 PRO1854Q9UHT4 67 aa7.86□□□□□ -1.15
PRKCB-207ENST00000486868 HUWE1Q7Z6Z7 4374 aaKnown RBP7.86□□□□□ -1.15
PRKCB-207ENST00000486868 NBEAL1Q6ZS30 2694 aa7.85□□□□□ -1.15
PRKCB-207ENST00000486868 GAGE12HA6NDE8 117 aa7.85□□□□□ -1.15
PRKCB-207ENST00000486868 F8WDY8 70 aa7.85□□□□□ -1.15
PRKCB-207ENST00000486868 K7ERJ3 54 aa7.85□□□□□ -1.15
PRKCB-207ENST00000486868 IGHV3-33P01772 117 aa7.85□□□□□ -1.15
PRKCB-207ENST00000486868 COX17Q14061 63 aa7.85□□□□□ -1.15
PRKCB-207ENST00000486868 LINC00308Q8TCZ7 52 aa7.85□□□□□ -1.15
PRKCB-207ENST00000486868 UBE2WQ96B02 151 aa7.85□□□□□ -1.15
PRKCB-207ENST00000486868 LYRM7Q5U5X0 104 aa7.84□□□□□ -1.15
PRKCB-207ENST00000486868 CFAP161Q6P656 301 aa7.84□□□□□ -1.15
PRKCB-207ENST00000486868 KRTAP26-1Q6PEX3 210 aa7.84□□□□□ -1.15
PRKCB-207ENST00000486868 IGLV10-54A0A075B6I4 117 aa7.83□□□□□ -1.16
PRKCB-207ENST00000486868 LOC107984156A0A0G2JMH3 177 aa7.83□□□□□ -1.16
PRKCB-207ENST00000486868 GAGE10A6NGK3 116 aa7.83□□□□□ -1.16
PRKCB-207ENST00000486868 K7EP34 96 aa7.83□□□□□ -1.16
PRKCB-207ENST00000486868 ARL17AQ8IVW1 177 aa7.83□□□□□ -1.16
PRKCB-207ENST00000486868 PGPEP1Q9NXJ5 209 aa7.83□□□□□ -1.16
PRKCB-207ENST00000486868 LINC00588Q9Y4M8 146 aa7.83□□□□□ -1.16
PRKCB-207ENST00000486868 GVQW2A0A096LPI5 108 aaPredicted RBP7.82□□□□□ -1.16
PRKCB-207ENST00000486868 CKS1BP61024 79 aa7.82□□□□□ -1.16
PRKCB-207ENST00000486868 ERG28Q9UKR5 140 aa7.82□□□□□ -1.16
PRKCB-207ENST00000486868 TSPAN13O95857 204 aa7.81□□□□□ -1.16
PRKCB-207ENST00000486868 C1orf43Q9BWL3 253 aa7.81□□□□□ -1.16
PRKCB-207ENST00000486868 SPCS1Q9Y6A9 102 aa7.81□□□□□ -1.16
PRKCB-207ENST00000486868 TENM3Q9P273 2699 aa7.81□□□□□ -1.16
PRKCB-207ENST00000486868 LINC00158P58513 81 aa7.8□□□□□ -1.16
PRKCB-207ENST00000486868 SPAG11BQ08648 103 aa7.8□□□□□ -1.16
PRKCB-207ENST00000486868 MIR7-3HGQ8N6C7 128 aa7.8□□□□□ -1.16
PRKCB-207ENST00000486868 RMI2Q96E14 147 aa7.8□□□□□ -1.16
PRKCB-207ENST00000486868 DNAH9Q9NYC9 4486 aa7.79□□□□□ -1.16
PRKCB-207ENST00000486868 TRBV30A0A0K0K1B3 111 aa7.79□□□□□ -1.16
PRKCB-207ENST00000486868 NUPR2A6NF83 97 aa7.79□□□□□ -1.16
PRKCB-207ENST00000486868 EIF4EBP3O60516 100 aaPredicted RBP7.79□□□□□ -1.16
PRKCB-207ENST00000486868 SOSTDC1Q6X4U4 206 aa7.79□□□□□ -1.16
PRKCB-207ENST00000486868 NTN5Q8WTR8 489 aaPredicted RBP7.79□□□□□ -1.16
PRKCB-207ENST00000486868 C2orf48Q96LS8 159 aa7.79□□□□□ -1.16
PRKCB-207ENST00000486868 APLNQ9ULZ1 77 aa7.79□□□□□ -1.16
PRKCB-207ENST00000486868 TRBV20-1A0A075B6N2 111 aa7.78□□□□□ -1.16
PRKCB-207ENST00000486868 DAND5Q8N907 189 aa7.78□□□□□ -1.16
PRKCB-207ENST00000486868 TRAV13-2A0A0B4J235 113 aa7.77□□□□□ -1.17
PRKCB-207ENST00000486868 NAA38Q9BRA0 125 aaKnown RBP7.77□□□□□ -1.17
PRKCB-207ENST00000486868 A0A0U1RRA0 63 aa7.76□□□□□ -1.17
PRKCB-207ENST00000486868 NDUFC2O95298 119 aa7.76□□□□□ -1.17
PRKCB-207ENST00000486868 C2orf82Q6UX34 121 aa7.76□□□□□ -1.17
PRKCB-207ENST00000486868 IGKV2D-24A0A075B6R9 120 aa7.75□□□□□ -1.17
PRKCB-207ENST00000486868 ZNF561-AS1K7EIQ3 104 aa7.75□□□□□ -1.17
PRKCB-207ENST00000486868 SND1-IT1Q9HBX3 110 aa7.75□□□□□ -1.17
PRKCB-207ENST00000486868 COX6CP09669 75 aa7.74□□□□□ -1.17
PRKCB-207ENST00000486868 PFN2P35080 140 aa7.74□□□□□ -1.17
PRKCB-207ENST00000486868 NPC2P61916 151 aa7.74□□□□□ -1.17
PRKCB-207ENST00000486868 C15orf56Q8N910 161 aa7.74□□□□□ -1.17
PRKCB-207ENST00000486868 F8W1H4 67 aa7.73□□□□□ -1.17
PRKCB-207ENST00000486868 RPL13AP40429 203 aaKnown RBP7.73□□□□□ -1.17
PRKCB-207ENST00000486868 RNF151Q2KHN1 245 aa7.73□□□□□ -1.17
PRKCB-207ENST00000486868 UNQ6190/PRO20217Q6UXQ8 127 aa7.73□□□□□ -1.17
PRKCB-207ENST00000486868 SCGB1C2P0DMR2 95 aa7.72□□□□□ -1.17
PRKCB-207ENST00000486868 PSMB2P49721 201 aa7.72□□□□□ -1.17
PRKCB-207ENST00000486868 Q1RN00 199 aa7.72□□□□□ -1.17
PRKCB-207ENST00000486868 IGKV2-28A0A075B6P5 120 aa7.71□□□□□ -1.18
PRKCB-207ENST00000486868 IGKV2D-28P01615 120 aa7.71□□□□□ -1.18
PRKCB-207ENST00000486868 C10orf25Q5T742 122 aa7.71□□□□□ -1.18
PRKCB-207ENST00000486868 C6orf223Q8N319 242 aa7.71□□□□□ -1.18
PRKCB-207ENST00000486868 CAMK2N2Q96S95 79 aa7.71□□□□□ -1.18
PRKCB-207ENST00000486868 C6orf48Q9UBA6 75 aa7.71□□□□□ -1.18
PRKCB-207ENST00000486868 TRIAP1O43715 76 aa7.7□□□□□ -1.18
PRKCB-207ENST00000486868 RPL28P46779 137 aaKnown RBP7.7□□□□□ -1.18
PRKCB-207ENST00000486868 UBE2DNLQ8IWF7 75 aa7.7□□□□□ -1.18
PRKCB-207ENST00000486868 DYNC2H1Q8NCM8 4307 aaKnown RBP7.69□□□□□ -1.18
PRKCB-207ENST00000486868 M0QXV9 152 aa7.69□□□□□ -1.18
PRKCB-207ENST00000486868 TCL1BO95988 128 aa7.69□□□□□ -1.18
PRKCB-207ENST00000486868 ATXN8Q156A1 80 aa7.69□□□□□ -1.18
PRKCB-207ENST00000486868 TTC32Q5I0X7 151 aa7.69□□□□□ -1.18
PRKCB-207ENST00000486868 LINC01600Q96MT4 127 aa7.69□□□□□ -1.18
PRKCB-207ENST00000486868 DNHD1Q96M86 4753 aa7.68□□□□□ -1.18
PRKCB-207ENST00000486868 TRBV10-2A0A0K0K1G8 114 aa7.68□□□□□ -1.18
PRKCB-207ENST00000486868 H3BMG7 143 aa7.68□□□□□ -1.18
PRKCB-207ENST00000486868 H7C2G1 150 aa7.68□□□□□ -1.18
PRKCB-207ENST00000486868 TLX1NBP0CAT3 122 aa7.68□□□□□ -1.18
PRKCB-207ENST00000486868 LINC00337Q8N6G1 96 aa7.68□□□□□ -1.18
PRKCB-207ENST00000486868 Q9HAA7 133 aa7.68□□□□□ -1.18
PRKCB-207ENST00000486868 PRO0461Q9UI25 63 aa7.68□□□□□ -1.18
PRKCB-207ENST00000486868 NDUFC2-KCTD14E9PQ53 114 aa7.67□□□□□ -1.18
PRKCB-207ENST00000486868 SYCNQ0VAF6 134 aa7.67□□□□□ -1.18
PRKCB-207ENST00000486868 HIGD2BQ4VC39 106 aa7.67□□□□□ -1.18
PRKCB-207ENST00000486868 C9orf116Q5BN46 136 aaPredicted RBP7.67□□□□□ -1.18
PRKCB-207ENST00000486868 Q6ZRU5 148 aa7.67□□□□□ -1.18
PRKCB-207ENST00000486868 LINC00526Q96FQ7 95 aa7.66□□□□□ -1.18
PRKCB-207ENST00000486868 TMEM126AQ9H061 195 aa7.66□□□□□ -1.18
PRKCB-207ENST00000486868 STAB2Q8WWQ8 2551 aa7.65□□□□□ -1.18
PRKCB-207ENST00000486868 USP17L23D6RBM5 183 aa7.65□□□□□ -1.18
PRKCB-207ENST00000486868 H0YGX0 51 aa7.65□□□□□ -1.18
PRKCB-207ENST00000486868 LST1O00453 97 aa7.65□□□□□ -1.18
PRKCB-207ENST00000486868 CARD19Q96LW7 228 aa7.64□□□□□ -1.19
PRKCB-207ENST00000486868 NBDYA0A0U1RRE5 68 aa7.63□□□□□ -1.19
PRKCB-207ENST00000486868 TRACP01848 142 aa7.63□□□□□ -1.19
PRKCB-207ENST00000486868 LINC01620Q4KN68 170 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms