RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 IGHV3-30-5P0DP03 117 aa4.95□□□□□ -1.62
TMC1-204ENST00000486417 RPL13AP40429 203 aaKnown RBP4.95□□□□□ -1.62
TMC1-204ENST00000486417 NANOS2P60321 138 aaKnown RBP4.95□□□□□ -1.62
TMC1-204ENST00000486417 SRSF9Q13242 221 aaKnown RBP eCLIP4.95□□□□□ -1.62
TMC1-204ENST00000486417 A0A1B0GWB2 263 aa4.94□□□□□ -1.62
TMC1-204ENST00000486417 CLPSL2Q6UWE3 100 aa4.94□□□□□ -1.62
TMC1-204ENST00000486417 C11orf45Q8TAV5 145 aa4.94□□□□□ -1.62
TMC1-204ENST00000486417 RAB37Q96AX2 223 aa4.94□□□□□ -1.62
TMC1-204ENST00000486417 LITAFQ99732 161 aa4.94□□□□□ -1.62
TMC1-204ENST00000486417 Q9H8V8 135 aa4.94□□□□□ -1.62
TMC1-204ENST00000486417 DEFB131BA0A096LNP1 70 aa4.93□□□□□ -1.62
TMC1-204ENST00000486417 IGHV3OR16-9A0A0B4J2B5 98 aa4.93□□□□□ -1.62
TMC1-204ENST00000486417 CCL25O15444 150 aa4.93□□□□□ -1.62
TMC1-204ENST00000486417 TIMM17BO60830 172 aa4.93□□□□□ -1.62
TMC1-204ENST00000486417 TSPAN13O95857 204 aa4.93□□□□□ -1.62
TMC1-204ENST00000486417 SS18Q15532 418 aa4.93□□□□□ -1.62
TMC1-204ENST00000486417 DEFB121Q5J5C9 76 aa4.93□□□□□ -1.62
TMC1-204ENST00000486417 LYPD5Q6UWN5 251 aa4.93□□□□□ -1.62
TMC1-204ENST00000486417 SPANXDQ9BXN6 97 aa4.93□□□□□ -1.62
TMC1-204ENST00000486417 SPANXCQ9NY87 97 aa4.93□□□□□ -1.62
TMC1-204ENST00000486417 COL6A5A8TX70 2615 aa4.93□□□□□ -1.62
TMC1-204ENST00000486417 DNHD1Q96M86 4753 aa4.93□□□□□ -1.62
TMC1-204ENST00000486417 A0A087WZ39 114 aa4.92□□□□□ -1.62
TMC1-204ENST00000486417 H3BUT2 72 aa4.92□□□□□ -1.62
TMC1-204ENST00000486417 ANGP03950 147 aaKnown RBP4.92□□□□□ -1.62
TMC1-204ENST00000486417 Q75L30 129 aa4.92□□□□□ -1.62
TMC1-204ENST00000486417 LINC00269Q8N2A0 174 aa4.92□□□□□ -1.62
TMC1-204ENST00000486417 COX7B2Q8TF08 81 aa4.92□□□□□ -1.62
TMC1-204ENST00000486417 ZNF625Q96I27 306 aaPredicted RBP4.92□□□□□ -1.62
TMC1-204ENST00000486417 NAA38Q9BRA0 125 aaKnown RBP4.92□□□□□ -1.62
TMC1-204ENST00000486417 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
TMC1-204ENST00000486417 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
TMC1-204ENST00000486417 XCL1P47992 114 aa4.92□□□□□ -1.62
TMC1-204ENST00000486417 SEC61BP60468 96 aaKnown RBP4.92□□□□□ -1.62
TMC1-204ENST00000486417 REG3AQ06141 175 aa4.92□□□□□ -1.62
TMC1-204ENST00000486417 MIAQ16674 131 aa4.92□□□□□ -1.62
TMC1-204ENST00000486417 C5orf38Q86SI9 138 aa4.92□□□□□ -1.62
TMC1-204ENST00000486417 TENM3Q9P273 2699 aa4.91□□□□□ -1.62
TMC1-204ENST00000486417 TRAV10A0A0B4J240 114 aa4.91□□□□□ -1.62
TMC1-204ENST00000486417 A0A1W2PPM0 123 aa4.91□□□□□ -1.62
TMC1-204ENST00000486417 IGLL5B9A064 214 aa4.91□□□□□ -1.62
TMC1-204ENST00000486417 ADAMTSL4-AS1Q5T5F5 129 aa4.91□□□□□ -1.62
TMC1-204ENST00000486417 MUSTN1Q8IVN3 82 aa4.91□□□□□ -1.62
TMC1-204ENST00000486417 LINC01561Q8N1V8 128 aa4.91□□□□□ -1.62
TMC1-204ENST00000486417 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.63
TMC1-204ENST00000486417 APOMO95445 188 aa4.9□□□□□ -1.63
TMC1-204ENST00000486417 RPL24P83731 157 aaKnown RBP4.9□□□□□ -1.63
TMC1-204ENST00000486417 WFDC10BQ8IUB3 73 aa4.9□□□□□ -1.63
TMC1-204ENST00000486417 CHCHD10Q8WYQ3 142 aaPredicted RBP4.9□□□□□ -1.63
TMC1-204ENST00000486417 PRR34Q9NV39 138 aa4.9□□□□□ -1.63
TMC1-204ENST00000486417 TOMM7Q9P0U1 55 aa4.9□□□□□ -1.63
TMC1-204ENST00000486417 IGLV10-54A0A075B6I4 117 aa4.89□□□□□ -1.63
TMC1-204ENST00000486417 A0A0B4J2C4 111 aa4.89□□□□□ -1.63
TMC1-204ENST00000486417 IGHV3-33P01772 117 aa4.89□□□□□ -1.63
TMC1-204ENST00000486417 CFC1BP0CG36 223 aa4.89□□□□□ -1.63
TMC1-204ENST00000486417 CFC1P0CG37 223 aa4.89□□□□□ -1.63
TMC1-204ENST00000486417 CIRBPQ14011 172 aaKnown RBP4.89□□□□□ -1.63
TMC1-204ENST00000486417 ESRGQ1W209 222 aa4.89□□□□□ -1.63
TMC1-204ENST00000486417 MEIG1Q5JSS6 88 aa4.89□□□□□ -1.63
TMC1-204ENST00000486417 LINC00336Q6ZUF6 198 aa4.89□□□□□ -1.63
TMC1-204ENST00000486417 KLK12Q9UKR0 248 aa4.89□□□□□ -1.63
TMC1-204ENST00000486417 HUWE1Q7Z6Z7 4374 aaKnown RBP4.89□□□□□ -1.63
TMC1-204ENST00000486417 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.88□□□□□ -1.63
TMC1-204ENST00000486417 K7EP34 96 aa4.88□□□□□ -1.63
TMC1-204ENST00000486417 COX7A2LO14548 114 aa4.88□□□□□ -1.63
TMC1-204ENST00000486417 FABP2P12104 132 aa4.88□□□□□ -1.63
TMC1-204ENST00000486417 IFITM1P13164 125 aa4.88□□□□□ -1.63
TMC1-204ENST00000486417 NPC2P61916 151 aa4.88□□□□□ -1.63
TMC1-204ENST00000486417 Q8IZM0 81 aa4.88□□□□□ -1.63
TMC1-204ENST00000486417 DAND5Q8N907 189 aa4.88□□□□□ -1.63
TMC1-204ENST00000486417 C15orf53Q8NAA6 179 aa4.88□□□□□ -1.63
TMC1-204ENST00000486417 SPCS1Q9Y6A9 102 aa4.88□□□□□ -1.63
TMC1-204ENST00000486417 CRPP02741 224 aa4.87□□□□□ -1.63
TMC1-204ENST00000486417 PRSS2P07478 247 aa4.87□□□□□ -1.63
TMC1-204ENST00000486417 SFTA2Q6UW10 78 aa4.87□□□□□ -1.63
TMC1-204ENST00000486417 ENHOQ6UWT2 76 aa4.87□□□□□ -1.63
TMC1-204ENST00000486417 GTF2H5Q6ZYL4 71 aa4.87□□□□□ -1.63
TMC1-204ENST00000486417 LINC00308Q8TCZ7 52 aa4.87□□□□□ -1.63
TMC1-204ENST00000486417 B9D2Q9BPU9 175 aa4.87□□□□□ -1.63
TMC1-204ENST00000486417 SOSTDC1Q6X4U4 206 aa4.87□□□□□ -1.63
TMC1-204ENST00000486417 UBE2WQ96B02 151 aa4.87□□□□□ -1.63
TMC1-204ENST00000486417 PPDPFQ9H3Y8 114 aa4.87□□□□□ -1.63
TMC1-204ENST00000486417 PRO1854Q9UHT4 67 aa4.87□□□□□ -1.63
TMC1-204ENST00000486417 NBEAL1Q6ZS30 2694 aa4.87□□□□□ -1.63
TMC1-204ENST00000486417 NOTCH1P46531 2555 aa4.86□□□□□ -1.63
TMC1-204ENST00000486417 TRAV8-4A0A0B4J246 113 aa4.86□□□□□ -1.63
TMC1-204ENST00000486417 CXCL5P42830 114 aa4.86□□□□□ -1.63
TMC1-204ENST00000486417 KIAA0087Q14695 138 aa4.86□□□□□ -1.63
TMC1-204ENST00000486417 LINC01556Q5JQF7 62 aa4.86□□□□□ -1.63
TMC1-204ENST00000486417 COPS9Q8WXC6 57 aa4.86□□□□□ -1.63
TMC1-204ENST00000486417 DNAH9Q9NYC9 4486 aa4.85□□□□□ -1.63
TMC1-204ENST00000486417 IBA57-AS1B1ANH7 110 aa4.85□□□□□ -1.63
TMC1-204ENST00000486417 ERG28Q9UKR5 140 aa4.85□□□□□ -1.63
TMC1-204ENST00000486417 DNAH10OSP0CZ25 163 aa4.84□□□□□ -1.63
TMC1-204ENST00000486417 SPAG11BQ08648 103 aa4.84□□□□□ -1.63
TMC1-204ENST00000486417 LYRM7Q5U5X0 104 aa4.84□□□□□ -1.63
TMC1-204ENST00000486417 C2orf82Q6UX34 121 aa4.84□□□□□ -1.63
TMC1-204ENST00000486417 MIR7-3HGQ8N6C7 128 aa4.84□□□□□ -1.63
TMC1-204ENST00000486417 KLK5Q9Y337 293 aaPredicted RBP4.84□□□□□ -1.63
TMC1-204ENST00000486417 LINC00588Q9Y4M8 146 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms