RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 LINC01600Q96MT4 127 aa8.15□□□□□ -1.1
PKP4-213ENST00000486254 TOMM7Q9P0U1 55 aa8.15□□□□□ -1.1
PKP4-213ENST00000486254 ANK2Q01484 3957 aa8.15□□□□□ -1.11
PKP4-213ENST00000486254 FOXI1Q12951 378 aa8.14□□□□□ -1.11
PKP4-213ENST00000486254 C6orf226Q5I0X4 101 aa8.14□□□□□ -1.11
PKP4-213ENST00000486254 KLK5Q9Y337 293 aaPredicted RBP8.14□□□□□ -1.11
PKP4-213ENST00000486254 TCL1BO95988 128 aa8.14□□□□□ -1.11
PKP4-213ENST00000486254 COX6CP09669 75 aa8.14□□□□□ -1.11
PKP4-213ENST00000486254 KIAA0087Q14695 138 aa8.14□□□□□ -1.11
PKP4-213ENST00000486254 DAND5Q8N907 189 aa8.14□□□□□ -1.11
PKP4-213ENST00000486254 C15orf53Q8NAA6 179 aa8.14□□□□□ -1.11
PKP4-213ENST00000486254 DEFB131BA0A096LNP1 70 aa8.13□□□□□ -1.11
PKP4-213ENST00000486254 K7EIL1 84 aa8.13□□□□□ -1.11
PKP4-213ENST00000486254 PSMB2P49721 201 aa8.13□□□□□ -1.11
PKP4-213ENST00000486254 Q1RN00 199 aa8.13□□□□□ -1.11
PKP4-213ENST00000486254 CLPSL2Q6UWE3 100 aa8.13□□□□□ -1.11
PKP4-213ENST00000486254 MIR7-3HGQ8N6C7 128 aa8.13□□□□□ -1.11
PKP4-213ENST00000486254 NOTCH1P46531 2555 aa8.12□□□□□ -1.11
PKP4-213ENST00000486254 TRAV13-2A0A0B4J235 113 aa8.12□□□□□ -1.11
PKP4-213ENST00000486254 TRAV10A0A0B4J240 114 aa8.12□□□□□ -1.11
PKP4-213ENST00000486254 TRIAP1O43715 76 aa8.12□□□□□ -1.11
PKP4-213ENST00000486254 SCGB1C2P0DMR2 95 aa8.12□□□□□ -1.11
PKP4-213ENST00000486254 RPL13AP40429 203 aaKnown RBP8.12□□□□□ -1.11
PKP4-213ENST00000486254 MALP21145 153 aa8.11□□□□□ -1.11
PKP4-213ENST00000486254 ATXN8Q156A1 80 aa8.11□□□□□ -1.11
PKP4-213ENST00000486254 LINC01556Q5JQF7 62 aa8.11□□□□□ -1.11
PKP4-213ENST00000486254 CFAP161Q6P656 301 aa8.11□□□□□ -1.11
PKP4-213ENST00000486254 ENHOQ6UWT2 76 aa8.11□□□□□ -1.11
PKP4-213ENST00000486254 Q8N3U1 123 aa8.11□□□□□ -1.11
PKP4-213ENST00000486254 TENM3Q9P273 2699 aa8.11□□□□□ -1.11
PKP4-213ENST00000486254 CRPP02741 224 aa8.1□□□□□ -1.11
PKP4-213ENST00000486254 NANOS2P60321 138 aaKnown RBP8.1□□□□□ -1.11
PKP4-213ENST00000486254 CKS1BP61024 79 aa8.1□□□□□ -1.11
PKP4-213ENST00000486254 NPC2P61916 151 aa8.1□□□□□ -1.11
PKP4-213ENST00000486254 KLK12Q9UKR0 248 aa8.1□□□□□ -1.11
PKP4-213ENST00000486254 NBEAL1Q6ZS30 2694 aa8.1□□□□□ -1.11
PKP4-213ENST00000486254 LINC00158P58513 81 aa8.1□□□□□ -1.11
PKP4-213ENST00000486254 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
PKP4-213ENST00000486254 GVQW2A0A096LPI5 108 aaPredicted RBP8.09□□□□□ -1.11
PKP4-213ENST00000486254 GAGE12HA6NDE8 117 aa8.09□□□□□ -1.11
PKP4-213ENST00000486254 J3QR89 54 aa8.09□□□□□ -1.11
PKP4-213ENST00000486254 CCL18P55774 89 aa8.09□□□□□ -1.11
PKP4-213ENST00000486254 WFDC2Q14508 124 aa8.09□□□□□ -1.11
PKP4-213ENST00000486254 MGAM2Q2M2H8 2515 aa8.08□□□□□ -1.12
PKP4-213ENST00000486254 A0A0U1RRA0 63 aa8.08□□□□□ -1.12
PKP4-213ENST00000486254 H7C2G1 150 aa8.08□□□□□ -1.12
PKP4-213ENST00000486254 NDUFC2O95298 119 aa8.08□□□□□ -1.12
PKP4-213ENST00000486254 ESRGQ1W209 222 aa8.08□□□□□ -1.12
PKP4-213ENST00000486254 WFDC10BQ8IUB3 73 aa8.08□□□□□ -1.12
PKP4-213ENST00000486254 IGLV10-54A0A075B6I4 117 aa8.07□□□□□ -1.12
PKP4-213ENST00000486254 F8WDY8 70 aa8.07□□□□□ -1.12
PKP4-213ENST00000486254 LST1O00453 97 aa8.07□□□□□ -1.12
PKP4-213ENST00000486254 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
PKP4-213ENST00000486254 SMCPP49901 116 aaPredicted RBP8.07□□□□□ -1.12
PKP4-213ENST00000486254 LINC01620Q4KN68 170 aa8.07□□□□□ -1.12
PKP4-213ENST00000486254 RPL28P46779 137 aaKnown RBP8.06□□□□□ -1.12
PKP4-213ENST00000486254 SPAG11BQ08648 103 aa8.06□□□□□ -1.12
PKP4-213ENST00000486254 TEN1Q86WV5 123 aa8.06□□□□□ -1.12
PKP4-213ENST00000486254 IGKV2-28A0A075B6P5 120 aa8.05□□□□□ -1.12
PKP4-213ENST00000486254 H3BT86 120 aa8.05□□□□□ -1.12
PKP4-213ENST00000486254 IGKV2D-28P01615 120 aa8.05□□□□□ -1.12
PKP4-213ENST00000486254 ETDBQ3ZM63 59 aa8.05□□□□□ -1.12
PKP4-213ENST00000486254 KRTAP26-1Q6PEX3 210 aa8.05□□□□□ -1.12
PKP4-213ENST00000486254 UBE2WQ96B02 151 aa8.05□□□□□ -1.12
PKP4-213ENST00000486254 SLC25A20O43772 301 aa8.05□□□□□ -1.12
PKP4-213ENST00000486254 PFN2P35080 140 aa8.05□□□□□ -1.12
PKP4-213ENST00000486254 C2orf82Q6UX34 121 aa8.05□□□□□ -1.12
PKP4-213ENST00000486254 LINC00337Q8N6G1 96 aa8.05□□□□□ -1.12
PKP4-213ENST00000486254 CARD19Q96LW7 228 aa8.05□□□□□ -1.12
PKP4-213ENST00000486254 TRBV10-2A0A0K0K1G8 114 aa8.04□□□□□ -1.12
PKP4-213ENST00000486254 C9JAW5 83 aa8.03□□□□□ -1.12
PKP4-213ENST00000486254 TRACP01848 142 aa8.03□□□□□ -1.12
PKP4-213ENST00000486254 NTN5Q8WTR8 489 aaPredicted RBP8.03□□□□□ -1.12
PKP4-213ENST00000486254 UPK3BQ9BT76 320 aa8.03□□□□□ -1.12
PKP4-213ENST00000486254 ANKRD29Q8N6D5 301 aa8.02□□□□□ -1.13
PKP4-213ENST00000486254 PPDPFLQ8WWR9 84 aa8.02□□□□□ -1.13
PKP4-213ENST00000486254 C2orf48Q96LS8 159 aa8.02□□□□□ -1.13
PKP4-213ENST00000486254 DEFB121Q5J5C9 76 aa8.01□□□□□ -1.13
PKP4-213ENST00000486254 MDFIQ99750 246 aa8.01□□□□□ -1.13
PKP4-213ENST00000486254 C1orf43Q9BWL3 253 aa8.01□□□□□ -1.13
PKP4-213ENST00000486254 CBY1Q9Y3M2 126 aa8.01□□□□□ -1.13
PKP4-213ENST00000486254 H0YGX0 51 aa8.01□□□□□ -1.13
PKP4-213ENST00000486254 PRB2P02812 416 aaPredicted RBP8.01□□□□□ -1.13
PKP4-213ENST00000486254 MTURNQ8N3F0 131 aa8.01□□□□□ -1.13
PKP4-213ENST00000486254 B9D2Q9BPU9 175 aa8.01□□□□□ -1.13
PKP4-213ENST00000486254 UNQ6190/PRO20217Q6UXQ8 127 aa7.99□□□□□ -1.13
PKP4-213ENST00000486254 CLEC2BQ92478 149 aa7.99□□□□□ -1.13
PKP4-213ENST00000486254 MRAPQ8TCY5 172 aa7.98□□□□□ -1.13
PKP4-213ENST00000486254 TMEM126AQ9H061 195 aa7.98□□□□□ -1.13
PKP4-213ENST00000486254 LINC00588Q9Y4M8 146 aa7.98□□□□□ -1.13
PKP4-213ENST00000486254 ZNF561-AS1K7EIQ3 104 aa7.97□□□□□ -1.13
PKP4-213ENST00000486254 C10orf25Q5T742 122 aa7.97□□□□□ -1.13
PKP4-213ENST00000486254 C15orf56Q8N910 161 aa7.97□□□□□ -1.13
PKP4-213ENST00000486254 SMIM11BQ8TCY0 68 aa7.97□□□□□ -1.13
PKP4-213ENST00000486254 RMI2Q96E14 147 aa7.97□□□□□ -1.13
PKP4-213ENST00000486254 VPS25Q9BRG1 176 aa7.97□□□□□ -1.13
PKP4-213ENST00000486254 A0A1B0GX51 115 aa7.97□□□□□ -1.13
PKP4-213ENST00000486254 RNF151Q2KHN1 245 aa7.97□□□□□ -1.13
PKP4-213ENST00000486254 C6orf48Q9UBA6 75 aa7.97□□□□□ -1.13
PKP4-213ENST00000486254 C6orf223Q8N319 242 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms