RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 TENM2Q9NT68 2774 aa-0.48□□□□□ -2.49
GCFC2-209ENST00000486016 SRRM2Q9UQ35 2752 aaKnown RBP-0.48□□□□□ -2.49
GCFC2-209ENST00000486016 NLRP1Q9C000 1473 aa-0.48□□□□□ -2.49
GCFC2-209ENST00000486016 SPHKAPQ2M3C7 1700 aa-0.49□□□□□ -2.49
GCFC2-209ENST00000486016 XRN1Q8IZH2 1706 aaKnown RBP-0.49□□□□□ -2.49
GCFC2-209ENST00000486016 ACANP16112 2415 aa-0.49□□□□□ -2.49
GCFC2-209ENST00000486016 M0R2T5 61 aa-0.49□□□□□ -2.49
GCFC2-209ENST00000486016 SEC11AP67812 179 aa-0.49□□□□□ -2.49
GCFC2-209ENST00000486016 MRPS10P82664 201 aaKnown RBP-0.49□□□□□ -2.49
GCFC2-209ENST00000486016 PLEKHH2Q8IVE3 1493 aa-0.49□□□□□ -2.49
GCFC2-209ENST00000486016 DNAJC13O75165 2243 aa-0.49□□□□□ -2.49
GCFC2-209ENST00000486016 CC2D2AQ9P2K1 1620 aa-0.49□□□□□ -2.49
GCFC2-209ENST00000486016 A0A0G2JMZ2 1700 aa-0.5□□□□□ -2.49
GCFC2-209ENST00000486016 NUP188Q5SRE5 1749 aa-0.5□□□□□ -2.49
GCFC2-209ENST00000486016 hADV29S1A0JD25 119 aa-0.5□□□□□ -2.49
GCFC2-209ENST00000486016 KRTDAPP60985 99 aa-0.5□□□□□ -2.49
GCFC2-209ENST00000486016 GTF2H5Q6ZYL4 71 aa-0.5□□□□□ -2.49
GCFC2-209ENST00000486016 HECTD4Q9Y4D8 3996 aa-0.5□□□□□ -2.49
GCFC2-209ENST00000486016 A0A087WVE0 104 aa-0.51□□□□□ -2.49
GCFC2-209ENST00000486016 KRTAP19-7Q3SYF9 63 aa-0.51□□□□□ -2.49
GCFC2-209ENST00000486016 IQSEC2Q5JU85 1478 aa-0.51□□□□□ -2.49
GCFC2-209ENST00000486016 SETXQ7Z333 2677 aaKnown RBP-0.51□□□□□ -2.49
GCFC2-209ENST00000486016 CGREF1Q99674 301 aa-0.51□□□□□ -2.49
GCFC2-209ENST00000486016 APLNQ9ULZ1 77 aa-0.51□□□□□ -2.49
GCFC2-209ENST00000486016 ANKRD17O75179 2603 aaKnown RBP-0.51□□□□□ -2.49
GCFC2-209ENST00000486016 FLNBO75369 2602 aaKnown RBP-0.51□□□□□ -2.49
GCFC2-209ENST00000486016 BSNQ9UPA5 3926 aa-0.52□□□□□ -2.49
GCFC2-209ENST00000486016 FMN2Q9NZ56 1722 aa-0.52□□□□□ -2.49
GCFC2-209ENST00000486016 COL4A6Q14031 1691 aa-0.52□□□□□ -2.49
GCFC2-209ENST00000486016 A0A1B0GU69 56 aa-0.52□□□□□ -2.49
GCFC2-209ENST00000486016 CPSF4LA6NMK7 179 aaKnown RBP-0.52□□□□□ -2.49
GCFC2-209ENST00000486016 TMEM262E9PQX1 116 aa-0.52□□□□□ -2.49
GCFC2-209ENST00000486016 HSD52Q0P140 79 aa-0.52□□□□□ -2.49
GCFC2-209ENST00000486016 ABCC5O15440 1437 aa-0.53□□□□□ -2.49
GCFC2-209ENST00000486016 C7orf77A4D0Y5 90 aa-0.53□□□□□ -2.49
GCFC2-209ENST00000486016 CHD1O14646 1710 aa-0.53□□□□□ -2.49
GCFC2-209ENST00000486016 LRP1BQ9NZR2 4599 aa-0.53□□□□□ -2.49
GCFC2-209ENST00000486016 C6orf201Q7Z4U5 140 aa-0.54□□□□□ -2.5
GCFC2-209ENST00000486016 VAMP8Q9BV40 100 aa-0.54□□□□□ -2.5
GCFC2-209ENST00000486016 CRIPTQ9P021 101 aa-0.54□□□□□ -2.5
GCFC2-209ENST00000486016 TOPAZ1Q8N9V7 1692 aa-0.54□□□□□ -2.5
GCFC2-209ENST00000486016 FAM135AQ9P2D6 1515 aa-0.54□□□□□ -2.5
GCFC2-209ENST00000486016 CNOT1A5YKK6 2376 aaKnown RBP-0.55□□□□□ -2.5
GCFC2-209ENST00000486016 C20orf202A1L168 122 aa-0.55□□□□□ -2.5
GCFC2-209ENST00000486016 CACFD1Q9UGQ2 172 aa-0.55□□□□□ -2.5
GCFC2-209ENST00000486016 MACF1Q9UPN3 7388 aaKnown RBP-0.55□□□□□ -2.5
GCFC2-209ENST00000486016 PDCD11Q14690 1871 aaKnown RBP-0.56□□□□□ -2.5
GCFC2-209ENST00000486016 ZFHX3Q15911 3703 aa-0.56□□□□□ -2.5
GCFC2-209ENST00000486016 A0A0G2JND7 137 aa-0.56□□□□□ -2.5
GCFC2-209ENST00000486016 H3BQF6 201 aa-0.56□□□□□ -2.5
GCFC2-209ENST00000486016 ASIPP42127 132 aa-0.56□□□□□ -2.5
GCFC2-209ENST00000486016 MARF1Q9Y4F3 1742 aaKnown RBP-0.56□□□□□ -2.5
GCFC2-209ENST00000486016 NKTRP30414 1462 aaKnown RBP-0.56□□□□□ -2.5
GCFC2-209ENST00000486016 CCDC141Q6ZP82 1450 aa-0.56□□□□□ -2.5
GCFC2-209ENST00000486016 PAPPA2Q9BXP8 1791 aa-0.57□□□□□ -2.5
GCFC2-209ENST00000486016 GNGT2O14610 69 aa-0.57□□□□□ -2.5
GCFC2-209ENST00000486016 DEFB107AQ8IZN7 70 aa-0.57□□□□□ -2.5
GCFC2-209ENST00000486016 EDC4Q6P2E9 1401 aaKnown RBP-0.57□□□□□ -2.5
GCFC2-209ENST00000486016 ABCA3Q99758 1704 aa-0.58□□□□□ -2.5
GCFC2-209ENST00000486016 ZFYVE16Q7Z3T8 1539 aa-0.58□□□□□ -2.5
GCFC2-209ENST00000486016 TRBV25-1A0A075B6N4 114 aa-0.58□□□□□ -2.5
GCFC2-209ENST00000486016 H0Y9P7 68 aa-0.58□□□□□ -2.5
GCFC2-209ENST00000486016 NDUFC1O43677 76 aa-0.58□□□□□ -2.5
GCFC2-209ENST00000486016 PMCHL1Q16048 86 aa-0.58□□□□□ -2.5
GCFC2-209ENST00000486016 H1FX-AS1Q4G0G2 97 aa-0.58□□□□□ -2.5
GCFC2-209ENST00000486016 PSMG4Q5JS54 123 aa-0.58□□□□□ -2.5
GCFC2-209ENST00000486016 MUC12Q9UKN1 5478 aa-0.58□□□□□ -2.5
GCFC2-209ENST00000486016 SLIT1O75093 1534 aa-0.59□□□□□ -2.5
GCFC2-209ENST00000486016 PDZD2O15018 2839 aa-0.59□□□□□ -2.5
GCFC2-209ENST00000486016 I3L3M4 83 aa-0.59□□□□□ -2.5
GCFC2-209ENST00000486016 KNDC1Q76NI1 1749 aa-0.59□□□□□ -2.5
GCFC2-209ENST00000486016 MLH3Q9UHC1 1453 aa-0.6□□□□□ -2.5
GCFC2-209ENST00000486016 PCNX1Q96RV3 2341 aa-0.6□□□□□ -2.51
GCFC2-209ENST00000486016 H7BZZ5 65 aa-0.6□□□□□ -2.51
GCFC2-209ENST00000486016 GNGT1P63211 74 aa-0.6□□□□□ -2.51
GCFC2-209ENST00000486016 DEFB135Q30KP9 77 aa-0.6□□□□□ -2.51
GCFC2-209ENST00000486016 MAP1AP78559 2803 aaPredicted RBP-0.6□□□□□ -2.51
GCFC2-209ENST00000486016 PRDM15P57071 1507 aaPredicted RBP-0.6□□□□□ -2.51
GCFC2-209ENST00000486016 TARBP1Q13395 1621 aaKnown RBP-0.6□□□□□ -2.51
GCFC2-209ENST00000486016 NCOA3Q9Y6Q9 1424 aa-0.61□□□□□ -2.51
GCFC2-209ENST00000486016 TRGV9Q99603 122 aa-0.61□□□□□ -2.51
GCFC2-209ENST00000486016 PRKDCP78527 4128 aaKnown RBP-0.62□□□□□ -2.51
GCFC2-209ENST00000486016 MT-ATP8P03928 68 aa-0.62□□□□□ -2.51
GCFC2-209ENST00000486016 UQCRHP07919 91 aa-0.62□□□□□ -2.51
GCFC2-209ENST00000486016 ARMS2P0C7Q2 107 aa-0.62□□□□□ -2.51
GCFC2-209ENST00000486016 PMCHL2Q9BQD1 86 aa-0.62□□□□□ -2.51
GCFC2-209ENST00000486016 LRRC37AA6NMS7 1700 aa-0.63□□□□□ -2.51
GCFC2-209ENST00000486016 STAB2Q8WWQ8 2551 aa-0.63□□□□□ -2.51
GCFC2-209ENST00000486016 TMEM218A2RU14 115 aa-0.63□□□□□ -2.51
GCFC2-209ENST00000486016 MPC2O95563 127 aa-0.63□□□□□ -2.51
GCFC2-209ENST00000486016 S100PP25815 95 aa-0.63□□□□□ -2.51
GCFC2-209ENST00000486016 SPRR2AP35326 72 aa-0.63□□□□□ -2.51
GCFC2-209ENST00000486016 KRTAP6-2Q3LI66 62 aa-0.63□□□□□ -2.51
GCFC2-209ENST00000486016 MRPL34Q9BQ48 92 aaKnown RBP-0.63□□□□□ -2.51
GCFC2-209ENST00000486016 ANKRD36BQ8N2N9 1353 aa-0.63□□□□□ -2.51
GCFC2-209ENST00000486016 SHPRHQ149N8 1683 aa-0.63□□□□□ -2.51
GCFC2-209ENST00000486016 NBEAL1Q6ZS30 2694 aa-0.63□□□□□ -2.51
GCFC2-209ENST00000486016 DSTQ03001 7570 aaKnown RBP-0.64□□□□□ -2.51
GCFC2-209ENST00000486016 S100A10P60903 97 aa-0.64□□□□□ -2.51
GCFC2-209ENST00000486016 SERP2Q8N6R1 65 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms