RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 PACRGQ96M98 296 aaPredicted RBP10.43□□□□□ -0.74
SMC4-216ENST00000485645 LINC01546A6NGU7 62 aa10.42□□□□□ -0.74
SMC4-216ENST00000485645 C2orf82Q6UX34 121 aa10.42□□□□□ -0.74
SMC4-216ENST00000485645 Q6ZN92 141 aa10.42□□□□□ -0.74
SMC4-216ENST00000485645 NDUFC2-KCTD14E9PQ53 114 aa10.41□□□□□ -0.74
SMC4-216ENST00000485645 M0QXV9 152 aa10.41□□□□□ -0.74
SMC4-216ENST00000485645 UBE2BP63146 152 aa10.41□□□□□ -0.74
SMC4-216ENST00000485645 TOMM6Q96B49 74 aa10.41□□□□□ -0.74
SMC4-216ENST00000485645 AMELXQ99217 191 aa10.41□□□□□ -0.74
SMC4-216ENST00000485645 VCX2Q9H322 139 aa10.41□□□□□ -0.74
SMC4-216ENST00000485645 H0Y9J4 135 aa10.4□□□□□ -0.74
SMC4-216ENST00000485645 ZC2HC1BQ5TFG8 222 aa10.4□□□□□ -0.74
SMC4-216ENST00000485645 LINC00173Q6ZV60 143 aa10.4□□□□□ -0.74
SMC4-216ENST00000485645 KRTAP7-1Q8IUC3 87 aa10.4□□□□□ -0.74
SMC4-216ENST00000485645 PRR26Q8N8Z3 221 aa10.4□□□□□ -0.74
SMC4-216ENST00000485645 TRAPPC1Q9Y5R8 145 aa10.4□□□□□ -0.74
SMC4-216ENST00000485645 PRSS2P07478 247 aa10.39□□□□□ -0.75
SMC4-216ENST00000485645 PAPPA-AS1Q5QFB9 102 aa10.39□□□□□ -0.75
SMC4-216ENST00000485645 TIMM17AQ99595 171 aa10.39□□□□□ -0.75
SMC4-216ENST00000485645 LINC01549A6NIU2 74 aa10.38□□□□□ -0.75
SMC4-216ENST00000485645 C9orf129Q5T035 196 aaKnown RBP10.38□□□□□ -0.75
SMC4-216ENST00000485645 FA2HQ7L5A8 372 aa10.38□□□□□ -0.75
SMC4-216ENST00000485645 ERASQ7Z444 233 aa10.38□□□□□ -0.75
SMC4-216ENST00000485645 YPEL4Q96NS1 127 aa10.38□□□□□ -0.75
SMC4-216ENST00000485645 TOMM7Q9P0U1 55 aa10.38□□□□□ -0.75
SMC4-216ENST00000485645 CKS1BP61024 79 aa10.37□□□□□ -0.75
SMC4-216ENST00000485645 C6orf226Q5I0X4 101 aa10.37□□□□□ -0.75
SMC4-216ENST00000485645 SLC7A5P1Q8MH63 180 aa10.37□□□□□ -0.75
SMC4-216ENST00000485645 SCGB3A1Q96QR1 104 aa10.37□□□□□ -0.75
SMC4-216ENST00000485645 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
SMC4-216ENST00000485645 FAM19A3Q7Z5A8 133 aa10.36□□□□□ -0.75
SMC4-216ENST00000485645 SMCO4Q9NRQ5 59 aa10.36□□□□□ -0.75
SMC4-216ENST00000485645 IGLV1-50A0A075B6I6 118 aa10.35□□□□□ -0.75
SMC4-216ENST00000485645 Q8IZM0 81 aa10.35□□□□□ -0.75
SMC4-216ENST00000485645 C18orf32Q8TCD1 76 aa10.35□□□□□ -0.75
SMC4-216ENST00000485645 HERVK_113P63121 156 aa10.34□□□□□ -0.75
SMC4-216ENST00000485645 SEC11AP67812 179 aa10.34□□□□□ -0.75
SMC4-216ENST00000485645 LPAP08519 4548 aa10.33□□□□□ -0.76
SMC4-216ENST00000485645 KRTAP1-4P0C5Y4 121 aa10.32□□□□□ -0.76
SMC4-216ENST00000485645 LINC00614P0C842 121 aa10.32□□□□□ -0.76
SMC4-216ENST00000485645 CBLN2Q8IUK8 224 aa10.32□□□□□ -0.76
SMC4-216ENST00000485645 LINC00469Q8N7U9 141 aa10.32□□□□□ -0.76
SMC4-216ENST00000485645 URB1-AS1Q96HZ7 61 aa10.32□□□□□ -0.76
SMC4-216ENST00000485645 GEMIN7Q9H840 131 aaKnown RBP10.32□□□□□ -0.76
SMC4-216ENST00000485645 CDKN2A-AS1Q9UH64 79 aa10.32□□□□□ -0.76
SMC4-216ENST00000485645 RAB5BP61020 215 aa10.3□□□□□ -0.76
SMC4-216ENST00000485645 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
SMC4-216ENST00000485645 C22orf24Q9Y442 160 aa10.3□□□□□ -0.76
SMC4-216ENST00000485645 A0A096LNJ9 63 aa10.29□□□□□ -0.76
SMC4-216ENST00000485645 F8VRH5 84 aa10.29□□□□□ -0.76
SMC4-216ENST00000485645 RPL13AP40429 203 aaKnown RBP10.29□□□□□ -0.76
SMC4-216ENST00000485645 LBHQ53QV2 105 aaPredicted RBP10.29□□□□□ -0.76
SMC4-216ENST00000485645 CST9LQ9H4G1 147 aa10.29□□□□□ -0.76
SMC4-216ENST00000485645 NUPR1O60356 82 aa10.28□□□□□ -0.76
SMC4-216ENST00000485645 ZNF861PO60384 105 aa10.28□□□□□ -0.76
SMC4-216ENST00000485645 TINCRA0A1B0GVN0 87 aa10.27□□□□□ -0.77
SMC4-216ENST00000485645 CXCL5P42830 114 aa10.27□□□□□ -0.77
SMC4-216ENST00000485645 PMVKQ15126 192 aa10.27□□□□□ -0.77
SMC4-216ENST00000485645 HBDP02042 147 aa10.26□□□□□ -0.77
SMC4-216ENST00000485645 PMCHL1Q16048 86 aa10.25□□□□□ -0.77
SMC4-216ENST00000485645 TP73-AS1Q9UF72 201 aa10.25□□□□□ -0.77
SMC4-216ENST00000485645 IGLV5-45A0A087WSX0 123 aa10.24□□□□□ -0.77
SMC4-216ENST00000485645 SMIM1B2RUZ4 78 aa10.24□□□□□ -0.77
SMC4-216ENST00000485645 PDZD11Q5EBL8 140 aa10.24□□□□□ -0.77
SMC4-216ENST00000485645 MRPL55Q7Z7F7 128 aaKnown RBP10.24□□□□□ -0.77
SMC4-216ENST00000485645 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
SMC4-216ENST00000485645 ATP5LO75964 103 aa10.22□□□□□ -0.77
SMC4-216ENST00000485645 COX7B2Q8TF08 81 aa10.22□□□□□ -0.77
SMC4-216ENST00000485645 TRGC2P03986 189 aa10.21□□□□□ -0.77
SMC4-216ENST00000485645 NDUFA6P56556 154 aa10.21□□□□□ -0.77
SMC4-216ENST00000485645 BCE1O60756 84 aa10.2□□□□□ -0.78
SMC4-216ENST00000485645 IGLC3P0DOY3 106 aa10.2□□□□□ -0.78
SMC4-216ENST00000485645 RPL28P46779 137 aaKnown RBP10.2□□□□□ -0.78
SMC4-216ENST00000485645 PRR4Q16378 134 aa10.2□□□□□ -0.78
SMC4-216ENST00000485645 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
SMC4-216ENST00000485645 COLCA2A8K830 154 aa10.19□□□□□ -0.78
SMC4-216ENST00000485645 LINC00167Q96N53 147 aa10.19□□□□□ -0.78
SMC4-216ENST00000485645 H3BRM9 83 aa10.18□□□□□ -0.78
SMC4-216ENST00000485645 SPINK8P0C7L1 97 aa10.18□□□□□ -0.78
SMC4-216ENST00000485645 BAGE3Q86Y29 109 aa10.18□□□□□ -0.78
SMC4-216ENST00000485645 RPL37AP8A6NKH3 93 aa10.17□□□□□ -0.78
SMC4-216ENST00000485645 GAGE10A6NGK3 116 aa10.16□□□□□ -0.78
SMC4-216ENST00000485645 HSBP1O75506 76 aa10.15□□□□□ -0.78
SMC4-216ENST00000485645 ZNF22P17026 224 aaPredicted RBP10.15□□□□□ -0.78
SMC4-216ENST00000485645 IGLV5-37A0A075B6J1 123 aa10.14□□□□□ -0.79
SMC4-216ENST00000485645 A0A087X002 238 aa10.14□□□□□ -0.79
SMC4-216ENST00000485645 TSPAN13O95857 204 aa10.14□□□□□ -0.79
SMC4-216ENST00000485645 CRYGAP11844 174 aa10.14□□□□□ -0.79
SMC4-216ENST00000485645 NKAPP1Q8N9T2 125 aa10.14□□□□□ -0.79
SMC4-216ENST00000485645 IFI27L1Q96BM0 104 aa10.14□□□□□ -0.79
SMC4-216ENST00000485645 IGLV5-39A0A0G2JS06 123 aa10.13□□□□□ -0.79
SMC4-216ENST00000485645 C11orf86A6NJI1 115 aa10.13□□□□□ -0.79
SMC4-216ENST00000485645 FAM19A2Q8N3H0 131 aa10.13□□□□□ -0.79
SMC4-216ENST00000485645 TYMSOSQ8TAI1 123 aa10.13□□□□□ -0.79
SMC4-216ENST00000485645 TRAV12-1A0A0B4J245 112 aa10.12□□□□□ -0.79
SMC4-216ENST00000485645 CHTOPQ9Y3Y2 248 aaKnown RBP10.12□□□□□ -0.79
SMC4-216ENST00000485645 SCO1O75880 301 aa10.11□□□□□ -0.79
SMC4-216ENST00000485645 SERF1AO75920 110 aa10.11□□□□□ -0.79
SMC4-216ENST00000485645 UBE2AP49459 152 aa10.11□□□□□ -0.79
SMC4-216ENST00000485645 LINC00310P59036 64 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms