RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PNRC1Q12796 327 aaPredicted RBP11.44□□□□□ -0.58
COL27A1-205ENST00000485397 CLLU1Q5K131 121 aa11.44□□□□□ -0.58
COL27A1-205ENST00000485397 K7EMI3 77 aa11.43□□□□□ -0.58
COL27A1-205ENST00000485397 NUPR1O60356 82 aa11.43□□□□□ -0.58
COL27A1-205ENST00000485397 HERVK_113P63121 156 aa11.43□□□□□ -0.58
COL27A1-205ENST00000485397 LBHQ53QV2 105 aaPredicted RBP11.43□□□□□ -0.58
COL27A1-205ENST00000485397 CTDSP1Q9GZU7 261 aa11.43□□□□□ -0.58
COL27A1-205ENST00000485397 NXT2Q9NPJ8 142 aaKnown RBP11.42□□□□□ -0.58
COL27A1-205ENST00000485397 F8VRH5 84 aa11.41□□□□□ -0.58
COL27A1-205ENST00000485397 SEC11AP67812 179 aa11.41□□□□□ -0.58
COL27A1-205ENST00000485397 GEMIN7Q9H840 131 aaKnown RBP11.41□□□□□ -0.58
COL27A1-205ENST00000485397 PAPPA-AS1Q5QFB9 102 aa11.4□□□□□ -0.58
COL27A1-205ENST00000485397 MRPL55Q7Z7F7 128 aaKnown RBP11.4□□□□□ -0.58
COL27A1-205ENST00000485397 TIMM17AQ99595 171 aa11.4□□□□□ -0.58
COL27A1-205ENST00000485397 TSPAN13O95857 204 aa11.39□□□□□ -0.59
COL27A1-205ENST00000485397 TOMM6Q96B49 74 aa11.39□□□□□ -0.59
COL27A1-205ENST00000485397 TP73-AS1Q9UF72 201 aa11.39□□□□□ -0.59
COL27A1-205ENST00000485397 IFITM2Q01629 132 aa11.38□□□□□ -0.59
COL27A1-205ENST00000485397 KIAA1644Q3SXP7 199 aa11.38□□□□□ -0.59
COL27A1-205ENST00000485397 A0A087X002 238 aa11.37□□□□□ -0.59
COL27A1-205ENST00000485397 BCE1O60756 84 aa11.37□□□□□ -0.59
COL27A1-205ENST00000485397 SMIM1B2RUZ4 78 aa11.36□□□□□ -0.59
COL27A1-205ENST00000485397 G0S2P27469 103 aa11.36□□□□□ -0.59
COL27A1-205ENST00000485397 CXCL5P42830 114 aa11.36□□□□□ -0.59
COL27A1-205ENST00000485397 RPL28P46779 137 aaKnown RBP11.36□□□□□ -0.59
COL27A1-205ENST00000485397 LINC00167Q96N53 147 aa11.36□□□□□ -0.59
COL27A1-205ENST00000485397 MUC2Q02817 5179 aa11.35□□□□□ -0.59
COL27A1-205ENST00000485397 RPL37AP8A6NKH3 93 aa11.35□□□□□ -0.59
COL27A1-205ENST00000485397 ADCYAP1P18509 176 aa11.35□□□□□ -0.59
COL27A1-205ENST00000485397 ERASQ7Z444 233 aa11.35□□□□□ -0.59
COL27A1-205ENST00000485397 SCGB3A1Q96QR1 104 aa11.35□□□□□ -0.59
COL27A1-205ENST00000485397 UQCC3Q6UW78 93 aa11.34□□□□□ -0.59
COL27A1-205ENST00000485397 COX7B2Q8TF08 81 aa11.34□□□□□ -0.59
COL27A1-205ENST00000485397 GAGE10A6NGK3 116 aa11.33□□□□□ -0.6
COL27A1-205ENST00000485397 PDZD11Q5EBL8 140 aa11.33□□□□□ -0.6
COL27A1-205ENST00000485397 TINCRA0A1B0GVN0 87 aa11.32□□□□□ -0.6
COL27A1-205ENST00000485397 ANAPC11Q9NYG5 84 aa11.32□□□□□ -0.6
COL27A1-205ENST00000485397 IGLV5-45A0A087WSX0 123 aa11.31□□□□□ -0.6
COL27A1-205ENST00000485397 CRYGAP11844 174 aa11.31□□□□□ -0.6
COL27A1-205ENST00000485397 RAB5BP61020 215 aa11.31□□□□□ -0.6
COL27A1-205ENST00000485397 TYMSOSQ8TAI1 123 aa11.31□□□□□ -0.6
COL27A1-205ENST00000485397 SPINK8P0C7L1 97 aa11.3□□□□□ -0.6
COL27A1-205ENST00000485397 CST9LQ9H4G1 147 aa11.29□□□□□ -0.6
COL27A1-205ENST00000485397 IGLV5-37A0A075B6J1 123 aa11.28□□□□□ -0.6
COL27A1-205ENST00000485397 COMMD7Q86VX2 200 aa11.28□□□□□ -0.6
COL27A1-205ENST00000485397 SCO1O75880 301 aa11.27□□□□□ -0.61
COL27A1-205ENST00000485397 KRTAP13-1Q8IUC0 172 aa11.27□□□□□ -0.61
COL27A1-205ENST00000485397 LINC01546A6NGU7 62 aa11.26□□□□□ -0.61
COL27A1-205ENST00000485397 UBE2AP49459 152 aa11.26□□□□□ -0.61
COL27A1-205ENST00000485397 KRTAP13-2Q52LG2 175 aa11.26□□□□□ -0.61
COL27A1-205ENST00000485397 NKAPP1Q8N9T2 125 aa11.26□□□□□ -0.61
COL27A1-205ENST00000485397 TRAV9-1A0A075B6T8 112 aa11.24□□□□□ -0.61
COL27A1-205ENST00000485397 TMEM218A2RU14 115 aa11.24□□□□□ -0.61
COL27A1-205ENST00000485397 PMVKQ15126 192 aa11.24□□□□□ -0.61
COL27A1-205ENST00000485397 IGKV2-28A0A075B6P5 120 aa11.23□□□□□ -0.61
COL27A1-205ENST00000485397 LINC01549A6NIU2 74 aa11.23□□□□□ -0.61
COL27A1-205ENST00000485397 IGKV2D-28P01615 120 aa11.23□□□□□ -0.61
COL27A1-205ENST00000485397 GNB1LQ9BYB4 327 aa11.22□□□□□ -0.61
COL27A1-205ENST00000485397 MRPL18Q9H0U6 180 aaKnown RBP11.22□□□□□ -0.61
COL27A1-205ENST00000485397 H3BRM9 83 aa11.21□□□□□ -0.61
COL27A1-205ENST00000485397 ATP5LO75964 103 aa11.21□□□□□ -0.61
COL27A1-205ENST00000485397 PFN2P35080 140 aa11.21□□□□□ -0.61
COL27A1-205ENST00000485397 FA2HQ7L5A8 372 aa11.21□□□□□ -0.61
COL27A1-205ENST00000485397 RETNLBQ9BQ08 111 aa11.21□□□□□ -0.61
COL27A1-205ENST00000485397 SEC11CQ9BY50 192 aa11.2□□□□□ -0.62
COL27A1-205ENST00000485397 A0A0U1RQV1 116 aa11.19□□□□□ -0.62
COL27A1-205ENST00000485397 PRLHP81277 87 aa11.19□□□□□ -0.62
COL27A1-205ENST00000485397 NDUFA5Q16718 116 aa11.19□□□□□ -0.62
COL27A1-205ENST00000485397 FAM229BQ4G0N7 80 aa11.19□□□□□ -0.62
COL27A1-205ENST00000485397 SMCO4Q9NRQ5 59 aa11.19□□□□□ -0.62
COL27A1-205ENST00000485397 IGLV5-39A0A0G2JS06 123 aa11.18□□□□□ -0.62
COL27A1-205ENST00000485397 IGLC3P0DOY3 106 aa11.18□□□□□ -0.62
COL27A1-205ENST00000485397 S100PP25815 95 aa11.18□□□□□ -0.62
COL27A1-205ENST00000485397 LINC00304Q8N9R0 145 aa11.18□□□□□ -0.62
COL27A1-205ENST00000485397 TMEM238C9JI98 176 aa11.17□□□□□ -0.62
COL27A1-205ENST00000485397 VPREB1P12018 145 aa11.17□□□□□ -0.62
COL27A1-205ENST00000485397 FABP9Q0Z7S8 132 aa11.17□□□□□ -0.62
COL27A1-205ENST00000485397 ZNF22P17026 224 aaPredicted RBP11.16□□□□□ -0.62
COL27A1-205ENST00000485397 NDUFA6P56556 154 aa11.16□□□□□ -0.62
COL27A1-205ENST00000485397 FAM19A1Q7Z5A9 133 aa11.16□□□□□ -0.62
COL27A1-205ENST00000485397 SND1-IT1Q9HBX3 110 aa11.16□□□□□ -0.62
COL27A1-205ENST00000485397 MUC17Q685J3 4493 aa11.15□□□□□ -0.62
COL27A1-205ENST00000485397 TMEM126AQ9H061 195 aa11.15□□□□□ -0.62
COL27A1-205ENST00000485397 ERG28Q9UKR5 140 aa11.15□□□□□ -0.62
COL27A1-205ENST00000485397 A0A096LNJ9 63 aa11.14□□□□□ -0.63
COL27A1-205ENST00000485397 IGKV2D-26A0A0A0MRZ7 120 aa11.14□□□□□ -0.63
COL27A1-205ENST00000485397 COX19Q49B96 90 aa11.14□□□□□ -0.63
COL27A1-205ENST00000485397 Q8NDZ9 215 aa11.14□□□□□ -0.63
COL27A1-205ENST00000485397 ZNF625Q96I27 306 aaPredicted RBP11.14□□□□□ -0.63
COL27A1-205ENST00000485397 M0R378 163 aa11.12□□□□□ -0.63
COL27A1-205ENST00000485397 URB1-AS1Q96HZ7 61 aa11.12□□□□□ -0.63
COL27A1-205ENST00000485397 FAT4Q6V0I7 4981 aa11.11□□□□□ -0.63
COL27A1-205ENST00000485397 RPL24P83731 157 aaKnown RBP11.11□□□□□ -0.63
COL27A1-205ENST00000485397 RHEBQ15382 184 aa11.1□□□□□ -0.63
COL27A1-205ENST00000485397 C10orf91Q5T1B1 145 aa11.1□□□□□ -0.63
COL27A1-205ENST00000485397 SVBPQ8N300 66 aa11.1□□□□□ -0.63
COL27A1-205ENST00000485397 PLEKHB2Q96CS7 222 aa11.1□□□□□ -0.63
COL27A1-205ENST00000485397 IGLV7-46A0A075B6I9 117 aa11.09□□□□□ -0.63
COL27A1-205ENST00000485397 COX17Q14061 63 aa11.09□□□□□ -0.63
COL27A1-205ENST00000485397 PMCHL1Q16048 86 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms