RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 H3BT86 120 aa4.33□□□□□ -1.72
CAPN13-206ENST00000485248 NDUFV3P56181 108 aaKnown RBP4.33□□□□□ -1.72
CAPN13-206ENST00000485248 SEC61BP60468 96 aaKnown RBP4.33□□□□□ -1.72
CAPN13-206ENST00000485248 LELP1Q5T871 98 aa4.33□□□□□ -1.72
CAPN13-206ENST00000485248 ARL17AQ8IVW1 177 aa4.33□□□□□ -1.72
CAPN13-206ENST00000485248 IMUPQ9GZP8 106 aa4.33□□□□□ -1.72
CAPN13-206ENST00000485248 SPANXCQ9NY87 97 aa4.33□□□□□ -1.72
CAPN13-206ENST00000485248 XCL2Q9UBD3 114 aa4.33□□□□□ -1.72
CAPN13-206ENST00000485248 LRP1Q07954 4544 aaKnown RBP4.33□□□□□ -1.72
CAPN13-206ENST00000485248 IGHV3-49A0A0A0MS15 119 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 TMEM223A0PJW6 202 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 H3BVH4 76 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 J3QQQ9 107 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 M0R2P5 195 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 PSCAO43653 123 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 RNASE3P12724 160 aaKnown RBP4.32□□□□□ -1.72
CAPN13-206ENST00000485248 IFITM1P13164 125 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 RNASE4P34096 147 aaKnown RBP4.32□□□□□ -1.72
CAPN13-206ENST00000485248 ATXN8Q156A1 80 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 LINC01620Q4KN68 170 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 IGFL4Q6B9Z1 124 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 CSNK1G2-AS1Q8NCQ2 148 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 OR10J6PQ8NGY7 276 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 PTH2Q96A98 100 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 ODF3Q96PU9 254 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 KIR2DL4Q99706 377 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 UPK3BQ9BT76 320 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 PPDPFQ9H3Y8 114 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 PYGO1Q9Y3Y4 419 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
CAPN13-206ENST00000485248 TRAV2A0A0B4J234 112 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 A0A0J9YXY3 114 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 TRBV7-7A0A0K0K1E9 115 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 A0A0U1RRA0 63 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 KNCNA6PVL3 124 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 KLLNB2CW77 178 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 SNCGO76070 127 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 DUSP14O95147 198 aaKnown RBP4.31□□□□□ -1.72
CAPN13-206ENST00000485248 ATP5G1P05496 136 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 ACYP1P07311 99 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 GIG44P09565 113 aaPredicted RBP4.31□□□□□ -1.72
CAPN13-206ENST00000485248 PRR9Q5T870 116 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 RNF182Q8N6D2 247 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 PHLDA3Q9Y5J5 127 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 PKHD1L1Q86WI1 4243 aa4.31□□□□□ -1.72
CAPN13-206ENST00000485248 IGHV3OR16-13A0A075B7E8 117 aa4.3□□□□□ -1.72
CAPN13-206ENST00000485248 IGHV3-74A0A0B4J1X5 117 aa4.3□□□□□ -1.72
CAPN13-206ENST00000485248 C9JAW5 83 aa4.3□□□□□ -1.72
CAPN13-206ENST00000485248 TIMM17BO60830 172 aa4.3□□□□□ -1.72
CAPN13-206ENST00000485248 DEFB130BP0DP73 79 aa4.3□□□□□ -1.72
CAPN13-206ENST00000485248 DEFB130AP0DP74 79 aa4.3□□□□□ -1.72
CAPN13-206ENST00000485248 LGALS3P17931 250 aaKnown RBP4.3□□□□□ -1.72
CAPN13-206ENST00000485248 S100A4P26447 101 aaKnown RBP4.3□□□□□ -1.72
CAPN13-206ENST00000485248 TSPEAR-AS2P59090 65 aa4.3□□□□□ -1.72
CAPN13-206ENST00000485248 ZNF415Q09FC8 603 aa4.3□□□□□ -1.72
CAPN13-206ENST00000485248 SDIM1Q6ZPB5 146 aa4.3□□□□□ -1.72
CAPN13-206ENST00000485248 Q6ZRN7 208 aaPredicted RBP4.3□□□□□ -1.72
CAPN13-206ENST00000485248 C14orf178Q8N769 122 aaPredicted RBP4.3□□□□□ -1.72
CAPN13-206ENST00000485248 RPL39LQ96EH5 51 aaKnown RBP4.3□□□□□ -1.72
CAPN13-206ENST00000485248 TMEM126AQ9H061 195 aa4.3□□□□□ -1.72
CAPN13-206ENST00000485248 CRCT1Q9UGL9 99 aa4.3□□□□□ -1.72
CAPN13-206ENST00000485248 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
CAPN13-206ENST00000485248 MUC2Q02817 5179 aa4.29□□□□□ -1.72
CAPN13-206ENST00000485248 TRAV4A0A0B4J268 109 aa4.29□□□□□ -1.72
CAPN13-206ENST00000485248 ZNF22P17026 224 aaPredicted RBP4.29□□□□□ -1.72
CAPN13-206ENST00000485248 TMEM170BQ5T4T1 132 aa4.29□□□□□ -1.72
CAPN13-206ENST00000485248 C20orf203Q8NBC4 194 aa4.29□□□□□ -1.72
CAPN13-206ENST00000485248 C20orf173Q96LM9 149 aa4.29□□□□□ -1.72
CAPN13-206ENST00000485248 C9orf85Q96MD7 179 aa4.29□□□□□ -1.72
CAPN13-206ENST00000485248 LITAFQ99732 161 aa4.29□□□□□ -1.72
CAPN13-206ENST00000485248 TRAV8-4A0A0B4J246 113 aa4.28□□□□□ -1.72
CAPN13-206ENST00000485248 LYRM9A8MSI8 78 aa4.28□□□□□ -1.72
CAPN13-206ENST00000485248 COX6CP09669 75 aa4.28□□□□□ -1.72
CAPN13-206ENST00000485248 RPL37AP61513 92 aaKnown RBP4.28□□□□□ -1.72
CAPN13-206ENST00000485248 SNRPD3P62318 126 aaKnown RBP4.28□□□□□ -1.72
CAPN13-206ENST00000485248 MRPS36P82909 103 aaKnown RBP4.28□□□□□ -1.72
CAPN13-206ENST00000485248 CD164L2Q6UWJ8 174 aa4.28□□□□□ -1.72
CAPN13-206ENST00000485248 MUSTN1Q8IVN3 82 aa4.28□□□□□ -1.72
CAPN13-206ENST00000485248 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
CAPN13-206ENST00000485248 H3BMM0 161 aa4.27□□□□□ -1.73
CAPN13-206ENST00000485248 M0QY20 66 aa4.27□□□□□ -1.73
CAPN13-206ENST00000485248 LST1O00453 97 aa4.27□□□□□ -1.73
CAPN13-206ENST00000485248 Q6ZQT7 251 aa4.27□□□□□ -1.73
CAPN13-206ENST00000485248 UBE2WQ96B02 151 aa4.27□□□□□ -1.73
CAPN13-206ENST00000485248 SS18L2Q9UHA2 77 aa4.27□□□□□ -1.73
CAPN13-206ENST00000485248 IGLV4-3A0A075B6K6 122 aa4.26□□□□□ -1.73
CAPN13-206ENST00000485248 IGHV3-16A0A0C4DH30 117 aa4.26□□□□□ -1.73
CAPN13-206ENST00000485248 IGHV1-58A0A0C4DH39 117 aa4.26□□□□□ -1.73
CAPN13-206ENST00000485248 H7C423 109 aa4.26□□□□□ -1.73
CAPN13-206ENST00000485248 I3L3M4 83 aa4.26□□□□□ -1.73
CAPN13-206ENST00000485248 GNRH2O43555 120 aa4.26□□□□□ -1.73
CAPN13-206ENST00000485248 MGPP08493 103 aa4.26□□□□□ -1.73
CAPN13-206ENST00000485248 FAM159AQ6UWV7 190 aa4.26□□□□□ -1.73
CAPN13-206ENST00000485248 TNFRSF18Q9Y5U5 241 aa4.26□□□□□ -1.73
CAPN13-206ENST00000485248 IGHV3-66A0A0C4DH42 116 aa4.25□□□□□ -1.73
CAPN13-206ENST00000485248 TINCRA0A1B0GVN0 87 aa4.25□□□□□ -1.73
CAPN13-206ENST00000485248 CCDC179H3BU77 68 aa4.25□□□□□ -1.73
CAPN13-206ENST00000485248 IGHV3-30-3P0DP02 117 aa4.25□□□□□ -1.73
CAPN13-206ENST00000485248 ID1P41134 155 aa4.25□□□□□ -1.73
CAPN13-206ENST00000485248 CXCL5P42830 114 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms