RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 C10orf126Q8N4M7 172 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 RETNQ9HD89 108 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 PRR34Q9NV39 138 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 DEFB131BA0A096LNP1 70 aa3.69□□□□□ -1.82
COL17A1-206ENST00000483876 TRAV8-4A0A0B4J246 113 aa3.69□□□□□ -1.82
COL17A1-206ENST00000483876 INAFM2P0DMQ5 153 aa3.69□□□□□ -1.82
COL17A1-206ENST00000483876 SMCPP49901 116 aaPredicted RBP3.69□□□□□ -1.82
COL17A1-206ENST00000483876 FXYD2P54710 66 aa3.69□□□□□ -1.82
COL17A1-206ENST00000483876 REG3AQ06141 175 aa3.69□□□□□ -1.82
COL17A1-206ENST00000483876 C15orf53Q8NAA6 179 aa3.69□□□□□ -1.82
COL17A1-206ENST00000483876 ZNF625Q96I27 306 aaPredicted RBP3.69□□□□□ -1.82
COL17A1-206ENST00000483876 LITAFQ99732 161 aa3.69□□□□□ -1.82
COL17A1-206ENST00000483876 SPANXDQ9BXN6 97 aa3.69□□□□□ -1.82
COL17A1-206ENST00000483876 SPANXCQ9NY87 97 aa3.69□□□□□ -1.82
COL17A1-206ENST00000483876 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
COL17A1-206ENST00000483876 IGHV3-64A0A075B6Q5 118 aa3.68□□□□□ -1.82
COL17A1-206ENST00000483876 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.68□□□□□ -1.82
COL17A1-206ENST00000483876 CDK2AP2O75956 126 aa3.68□□□□□ -1.82
COL17A1-206ENST00000483876 ANGP03950 147 aaKnown RBP3.68□□□□□ -1.82
COL17A1-206ENST00000483876 NANOS2P60321 138 aaKnown RBP3.68□□□□□ -1.82
COL17A1-206ENST00000483876 UBE2V1Q13404 147 aa3.68□□□□□ -1.82
COL17A1-206ENST00000483876 MIAQ16674 131 aa3.68□□□□□ -1.82
COL17A1-206ENST00000483876 Q8IZM0 81 aa3.68□□□□□ -1.82
COL17A1-206ENST00000483876 LINC00269Q8N2A0 174 aa3.68□□□□□ -1.82
COL17A1-206ENST00000483876 COX7B2Q8TF08 81 aa3.68□□□□□ -1.82
COL17A1-206ENST00000483876 NHP2Q9NX24 153 aaKnown RBP3.68□□□□□ -1.82
COL17A1-206ENST00000483876 KLK5Q9Y337 293 aaPredicted RBP3.68□□□□□ -1.82
COL17A1-206ENST00000483876 DNAH11Q96DT5 4516 aa3.68□□□□□ -1.82
COL17A1-206ENST00000483876 DYNC1H1Q14204 4646 aaKnown RBP3.67□□□□□ -1.82
COL17A1-206ENST00000483876 IBA57-AS1B1ANH7 110 aa3.67□□□□□ -1.82
COL17A1-206ENST00000483876 IGLL5B9A064 214 aa3.67□□□□□ -1.82
COL17A1-206ENST00000483876 K7EP13 123 aa3.67□□□□□ -1.82
COL17A1-206ENST00000483876 COX7A2LO14548 114 aa3.67□□□□□ -1.82
COL17A1-206ENST00000483876 PRSS2P07478 247 aa3.67□□□□□ -1.82
COL17A1-206ENST00000483876 CXCL5P42830 114 aa3.67□□□□□ -1.82
COL17A1-206ENST00000483876 ESRGQ1W209 222 aa3.67□□□□□ -1.82
COL17A1-206ENST00000483876 ADAMTSL4-AS1Q5T5F5 129 aa3.67□□□□□ -1.82
COL17A1-206ENST00000483876 GTF2H5Q6ZYL4 71 aa3.67□□□□□ -1.82
COL17A1-206ENST00000483876 MUSTN1Q8IVN3 82 aa3.67□□□□□ -1.82
COL17A1-206ENST00000483876 CHCHD10Q8WYQ3 142 aaPredicted RBP3.67□□□□□ -1.82
COL17A1-206ENST00000483876 Q9H8V8 135 aa3.67□□□□□ -1.82
COL17A1-206ENST00000483876 SRRM2Q9UQ35 2752 aaKnown RBP3.67□□□□□ -1.82
COL17A1-206ENST00000483876 HMCN2Q8NDA2 5059 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 A0A0B4J2C4 111 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 LOC107984156A0A0G2JMH3 177 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 A0A1W2PPM0 123 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 A4D1N5 150 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 APOMO95445 188 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 CFC1BP0CG36 223 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 CFC1P0CG37 223 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 DNAH10OSP0CZ25 163 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 FABP2P12104 132 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 XCL1P47992 114 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 FOXI1Q12951 378 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 COX17Q14061 63 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 KIAA0087Q14695 138 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 VAMP3Q15836 100 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 C6orf226Q5I0X4 101 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 LINC01556Q5JQF7 62 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 MEIG1Q5JSS6 88 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 SERTAD4-AS1Q5TG53 156 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 ENHOQ6UWT2 76 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 C5orf38Q86SI9 138 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 ARL17AQ8IVW1 177 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 PRO1854Q9UHT4 67 aa3.66□□□□□ -1.82
COL17A1-206ENST00000483876 IGKV3OR2-268A0A0C4DH90 116 aa3.65□□□□□ -1.83
COL17A1-206ENST00000483876 GAGE10A6NGK3 116 aa3.65□□□□□ -1.83
COL17A1-206ENST00000483876 F8WDY8 70 aa3.65□□□□□ -1.83
COL17A1-206ENST00000483876 H3BUT2 72 aa3.65□□□□□ -1.83
COL17A1-206ENST00000483876 MALP21145 153 aa3.65□□□□□ -1.83
COL17A1-206ENST00000483876 CCL18P55774 89 aa3.65□□□□□ -1.83
COL17A1-206ENST00000483876 LINC00308Q8TCZ7 52 aa3.65□□□□□ -1.83
COL17A1-206ENST00000483876 RAB37Q96AX2 223 aa3.65□□□□□ -1.83
COL17A1-206ENST00000483876 UPK3BQ9BT76 320 aa3.65□□□□□ -1.83
COL17A1-206ENST00000483876 KLK12Q9UKR0 248 aa3.65□□□□□ -1.83
COL17A1-206ENST00000483876 TRBV20-1A0A075B6N2 111 aa3.64□□□□□ -1.83
COL17A1-206ENST00000483876 K7EP34 96 aa3.64□□□□□ -1.83
COL17A1-206ENST00000483876 K7ERJ3 54 aa3.64□□□□□ -1.83
COL17A1-206ENST00000483876 CRPP02741 224 aa3.64□□□□□ -1.83
COL17A1-206ENST00000483876 CKS1BP61024 79 aa3.64□□□□□ -1.83
COL17A1-206ENST00000483876 LYRM7Q5U5X0 104 aa3.64□□□□□ -1.83
COL17A1-206ENST00000483876 ERG28Q9UKR5 140 aa3.64□□□□□ -1.83
COL17A1-206ENST00000483876 FAT2Q9NYQ8 4349 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 GVQW2A0A096LPI5 108 aaPredicted RBP3.63□□□□□ -1.83
COL17A1-206ENST00000483876 TRBV30A0A0K0K1B3 111 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 GAGE12HA6NDE8 117 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 EPM2AB3EWF7 344 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 IGHV3-33P01772 117 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 CFAP161Q6P656 301 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 KRTAP26-1Q6PEX3 210 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 WFDC10BQ8IUB3 73 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 UBE2WQ96B02 151 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 PGPEP1Q9NXJ5 209 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 TOMM7Q9P0U1 55 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 PLA2G2DQ9UNK4 145 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 SPCS1Q9Y6A9 102 aa3.63□□□□□ -1.83
COL17A1-206ENST00000483876 DNAH2Q9P225 4427 aa3.62□□□□□ -1.83
COL17A1-206ENST00000483876 VPS13DQ5THJ4 4388 aa3.62□□□□□ -1.83
COL17A1-206ENST00000483876 IGLV10-54A0A075B6I4 117 aa3.62□□□□□ -1.83
COL17A1-206ENST00000483876 NUPR2A6NF83 97 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms