RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 LRP2P98164 4655 aa12.07□□□□□ -0.48
HPS4-213ENST00000483631 H0Y9J4 135 aa12.06□□□□□ -0.48
HPS4-213ENST00000483631 CXCL5P42830 114 aa12.06□□□□□ -0.48
HPS4-213ENST00000483631 ALKBH7Q9BT30 221 aaPredicted RBP12.06□□□□□ -0.48
HPS4-213ENST00000483631 SEC11CQ9BY50 192 aa12.06□□□□□ -0.48
HPS4-213ENST00000483631 GNB1LQ9BYB4 327 aa12.06□□□□□ -0.48
HPS4-213ENST00000483631 GEMIN7Q9H840 131 aaKnown RBP12.06□□□□□ -0.48
HPS4-213ENST00000483631 TOMM7Q9P0U1 55 aa12.06□□□□□ -0.48
HPS4-213ENST00000483631 CDKN2A-AS1Q9UH64 79 aa12.06□□□□□ -0.48
HPS4-213ENST00000483631 LINC01546A6NGU7 62 aa12.05□□□□□ -0.48
HPS4-213ENST00000483631 UBE2BP63146 152 aa12.05□□□□□ -0.48
HPS4-213ENST00000483631 COX19Q49B96 90 aa12.05□□□□□ -0.48
HPS4-213ENST00000483631 S100PP25815 95 aa12.04□□□□□ -0.48
HPS4-213ENST00000483631 KIAA1644Q3SXP7 199 aa12.04□□□□□ -0.48
HPS4-213ENST00000483631 F8VRH5 84 aa12.03□□□□□ -0.48
HPS4-213ENST00000483631 SCGB3A1Q96QR1 104 aa12.03□□□□□ -0.48
HPS4-213ENST00000483631 IGLV1-50A0A075B6I6 118 aa12.01□□□□□ -0.49
HPS4-213ENST00000483631 IGLV5-45A0A087WSX0 123 aa12.01□□□□□ -0.49
HPS4-213ENST00000483631 TINCRA0A1B0GVN0 87 aa12.01□□□□□ -0.49
HPS4-213ENST00000483631 IFITM2Q01629 132 aa12.01□□□□□ -0.49
HPS4-213ENST00000483631 PDZD11Q5EBL8 140 aa12□□□□□ -0.49
HPS4-213ENST00000483631 NUPR1O60356 82 aa11.99□□□□□ -0.49
HPS4-213ENST00000483631 LBHQ53QV2 105 aaPredicted RBP11.99□□□□□ -0.49
HPS4-213ENST00000483631 LINC00469Q8N7U9 141 aa11.99□□□□□ -0.49
HPS4-213ENST00000483631 TP73-AS1Q9UF72 201 aa11.99□□□□□ -0.49
HPS4-213ENST00000483631 SMIM1B2RUZ4 78 aa11.98□□□□□ -0.49
HPS4-213ENST00000483631 PRR26Q8N8Z3 221 aa11.98□□□□□ -0.49
HPS4-213ENST00000483631 C22orf24Q9Y442 160 aa11.98□□□□□ -0.49
HPS4-213ENST00000483631 KRTAP1-4P0C5Y4 121 aa11.97□□□□□ -0.49
HPS4-213ENST00000483631 C10orf91Q5T1B1 145 aa11.96□□□□□ -0.49
HPS4-213ENST00000483631 CST9LQ9H4G1 147 aa11.96□□□□□ -0.49
HPS4-213ENST00000483631 XAGE1AQ9HD64 81 aa11.96□□□□□ -0.49
HPS4-213ENST00000483631 ZNF861PO60384 105 aa11.95□□□□□ -0.5
HPS4-213ENST00000483631 PMVKQ15126 192 aa11.95□□□□□ -0.5
HPS4-213ENST00000483631 RHEBQ15382 184 aa11.95□□□□□ -0.5
HPS4-213ENST00000483631 FA2HQ7L5A8 372 aa11.95□□□□□ -0.5
HPS4-213ENST00000483631 COX7B2Q8TF08 81 aa11.95□□□□□ -0.5
HPS4-213ENST00000483631 MRPL18Q9H0U6 180 aaKnown RBP11.95□□□□□ -0.5
HPS4-213ENST00000483631 RPL13AP40429 203 aaKnown RBP11.94□□□□□ -0.5
HPS4-213ENST00000483631 SMCO4Q9NRQ5 59 aa11.94□□□□□ -0.5
HPS4-213ENST00000483631 CARHSP1Q9Y2V2 147 aaKnown RBP11.94□□□□□ -0.5
HPS4-213ENST00000483631 FABP9Q0Z7S8 132 aa11.92□□□□□ -0.5
HPS4-213ENST00000483631 MRPL55Q7Z7F7 128 aaKnown RBP11.92□□□□□ -0.5
HPS4-213ENST00000483631 COMMD7Q86VX2 200 aa11.92□□□□□ -0.5
HPS4-213ENST00000483631 H3BRM9 83 aa11.91□□□□□ -0.5
HPS4-213ENST00000483631 RPS10P5Q9NQ39 176 aa11.89□□□□□ -0.51
HPS4-213ENST00000483631 IGLC3P0DOY3 106 aa11.88□□□□□ -0.51
HPS4-213ENST00000483631 IGLV5-37A0A075B6J1 123 aa11.87□□□□□ -0.51
HPS4-213ENST00000483631 BCE1O60756 84 aa11.87□□□□□ -0.51
HPS4-213ENST00000483631 SPINK8P0C7L1 97 aa11.87□□□□□ -0.51
HPS4-213ENST00000483631 RPL28P46779 137 aaKnown RBP11.87□□□□□ -0.51
HPS4-213ENST00000483631 IGLV5-39A0A0G2JS06 123 aa11.85□□□□□ -0.51
HPS4-213ENST00000483631 ATP5LO75964 103 aa11.85□□□□□ -0.51
HPS4-213ENST00000483631 LINC00167Q96N53 147 aa11.85□□□□□ -0.51
HPS4-213ENST00000483631 A0A096LNJ9 63 aa11.84□□□□□ -0.51
HPS4-213ENST00000483631 LINC00614P0C842 121 aa11.84□□□□□ -0.51
HPS4-213ENST00000483631 C18orf32Q8TCD1 76 aa11.84□□□□□ -0.51
HPS4-213ENST00000483631 HBDP02042 147 aa11.83□□□□□ -0.52
HPS4-213ENST00000483631 TRAPPC1Q9Y5R8 145 aa11.83□□□□□ -0.52
HPS4-213ENST00000483631 URB1-AS1Q96HZ7 61 aa11.82□□□□□ -0.52
HPS4-213ENST00000483631 RAB5BP61020 215 aa11.81□□□□□ -0.52
HPS4-213ENST00000483631 SFTA2Q6UW10 78 aa11.81□□□□□ -0.52
HPS4-213ENST00000483631 NKAPP1Q8N9T2 125 aa11.81□□□□□ -0.52
HPS4-213ENST00000483631 ZNF22P17026 224 aaPredicted RBP11.8□□□□□ -0.52
HPS4-213ENST00000483631 COX17Q14061 63 aa11.8□□□□□ -0.52
HPS4-213ENST00000483631 RPL37AP8A6NKH3 93 aa11.78□□□□□ -0.52
HPS4-213ENST00000483631 NDUFA6P56556 154 aa11.78□□□□□ -0.52
HPS4-213ENST00000483631 KRTAP13-1Q8IUC0 172 aa11.77□□□□□ -0.53
HPS4-213ENST00000483631 SNAPINO95295 136 aa11.76□□□□□ -0.53
HPS4-213ENST00000483631 CRYGAP11844 174 aa11.76□□□□□ -0.53
HPS4-213ENST00000483631 SVBPQ8N300 66 aa11.76□□□□□ -0.53
HPS4-213ENST00000483631 ERG28Q9UKR5 140 aa11.76□□□□□ -0.53
HPS4-213ENST00000483631 LPAP08519 4548 aa11.76□□□□□ -0.53
HPS4-213ENST00000483631 GAGE10A6NGK3 116 aa11.75□□□□□ -0.53
HPS4-213ENST00000483631 PFN2P35080 140 aa11.75□□□□□ -0.53
HPS4-213ENST00000483631 NDUFA5Q16718 116 aa11.75□□□□□ -0.53
HPS4-213ENST00000483631 APOC3P02656 99 aa11.74□□□□□ -0.53
HPS4-213ENST00000483631 RPL24P83731 157 aaKnown RBP11.74□□□□□ -0.53
HPS4-213ENST00000483631 BAGE3Q86Y29 109 aa11.74□□□□□ -0.53
HPS4-213ENST00000483631 SND1-IT1Q9HBX3 110 aa11.74□□□□□ -0.53
HPS4-213ENST00000483631 A0A087X002 238 aa11.73□□□□□ -0.53
HPS4-213ENST00000483631 C11orf86A6NJI1 115 aa11.73□□□□□ -0.53
HPS4-213ENST00000483631 VPREB1P12018 145 aa11.73□□□□□ -0.53
HPS4-213ENST00000483631 UBE2AP49459 152 aa11.73□□□□□ -0.53
HPS4-213ENST00000483631 PMCHL1Q16048 86 aa11.72□□□□□ -0.53
HPS4-213ENST00000483631 FAM229BQ4G0N7 80 aa11.71□□□□□ -0.53
HPS4-213ENST00000483631 TMEM170BQ5T4T1 132 aa11.71□□□□□ -0.53
HPS4-213ENST00000483631 IGKV2-28A0A075B6P5 120 aa11.7□□□□□ -0.54
HPS4-213ENST00000483631 IGKV2D-28P01615 120 aa11.7□□□□□ -0.54
HPS4-213ENST00000483631 TYMSOSQ8TAI1 123 aa11.7□□□□□ -0.54
HPS4-213ENST00000483631 CHCHD1Q96BP2 118 aaKnown RBP11.7□□□□□ -0.54
HPS4-213ENST00000483631 ZNF625Q96I27 306 aaPredicted RBP11.7□□□□□ -0.54
HPS4-213ENST00000483631 TRAV12-1A0A0B4J245 112 aa11.69□□□□□ -0.54
HPS4-213ENST00000483631 PRR4Q16378 134 aa11.69□□□□□ -0.54
HPS4-213ENST00000483631 CHTOPQ9Y3Y2 248 aaKnown RBP11.69□□□□□ -0.54
HPS4-213ENST00000483631 YPEL4Q96NS1 127 aa11.67□□□□□ -0.54
HPS4-213ENST00000483631 TMEM126AQ9H061 195 aa11.67□□□□□ -0.54
HPS4-213ENST00000483631 SCO1O75880 301 aa11.66□□□□□ -0.54
HPS4-213ENST00000483631 CTAG1AP78358 180 aa11.65□□□□□ -0.54
HPS4-213ENST00000483631 IFI27L1Q96BM0 104 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms