RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 LRRK2Q5S007 2527 aa1.75□□□□□ -2.13
COPA-203ENST00000481040 DSPP15924 2871 aaKnown RBP1.75□□□□□ -2.13
COPA-203ENST00000481040 PKD1L1Q8TDX9 2849 aa1.75□□□□□ -2.13
COPA-203ENST00000481040 CACNA1HO95180 2353 aa1.75□□□□□ -2.13
COPA-203ENST00000481040 ATP5EP56381 51 aaPredicted RBP1.75□□□□□ -2.13
COPA-203ENST00000481040 UBA52P62987 128 aaKnown RBP1.75□□□□□ -2.13
COPA-203ENST00000481040 DCDP81605 110 aaKnown RBP1.75□□□□□ -2.13
COPA-203ENST00000481040 Q8N6K4 173 aa1.75□□□□□ -2.13
COPA-203ENST00000481040 PLAC4Q8WY50 150 aa1.75□□□□□ -2.13
COPA-203ENST00000481040 DPY30Q9C005 99 aa1.75□□□□□ -2.13
COPA-203ENST00000481040 COL6A5A8TX70 2615 aa1.75□□□□□ -2.13
COPA-203ENST00000481040 PLEKHH2Q8IVE3 1493 aa1.75□□□□□ -2.13
COPA-203ENST00000481040 EPPK1P58107 5090 aaKnown RBP1.75□□□□□ -2.13
COPA-203ENST00000481040 SPTBN2O15020 2390 aa1.74□□□□□ -2.13
COPA-203ENST00000481040 SPENQ96T58 3664 aaKnown RBP1.74□□□□□ -2.13
COPA-203ENST00000481040 FLNCQ14315 2725 aa1.74□□□□□ -2.13
COPA-203ENST00000481040 MT-ATP8P03928 68 aa1.74□□□□□ -2.13
COPA-203ENST00000481040 EDDM3BP56851 147 aa1.74□□□□□ -2.13
COPA-203ENST00000481040 KRTAP10-4P60372 401 aaPredicted RBP1.74□□□□□ -2.13
COPA-203ENST00000481040 C9orf62Q8N4C0 152 aa1.74□□□□□ -2.13
COPA-203ENST00000481040 CYP4F30PQ9H0H9 118 aa1.74□□□□□ -2.13
COPA-203ENST00000481040 V9GYV3 84 aa1.74□□□□□ -2.13
COPA-203ENST00000481040 DOCK2Q92608 1830 aa1.74□□□□□ -2.13
COPA-203ENST00000481040 FLNAP21333 2647 aaKnown RBP1.74□□□□□ -2.13
COPA-203ENST00000481040 ATP7BP35670 1465 aa1.74□□□□□ -2.13
COPA-203ENST00000481040 C1orf167Q5SNV9 1468 aa1.74□□□□□ -2.13
COPA-203ENST00000481040 IGF2RP11717 2491 aa1.74□□□□□ -2.13
COPA-203ENST00000481040 FRYLO94915 3013 aa1.73□□□□□ -2.13
COPA-203ENST00000481040 ABCA1O95477 2261 aa1.73□□□□□ -2.13
COPA-203ENST00000481040 COL14A1Q05707 1796 aaKnown RBP1.73□□□□□ -2.13
COPA-203ENST00000481040 H3BQ15 152 aa1.73□□□□□ -2.13
COPA-203ENST00000481040 SNCAP37840 140 aa1.73□□□□□ -2.13
COPA-203ENST00000481040 C10orf128Q5T292 105 aa1.73□□□□□ -2.13
COPA-203ENST00000481040 Q9H521 79 aa1.73□□□□□ -2.13
COPA-203ENST00000481040 V9GYS6 101 aa1.73□□□□□ -2.13
COPA-203ENST00000481040 ANKRD26Q9UPS8 1709 aa1.73□□□□□ -2.13
COPA-203ENST00000481040 VWFP04275 2813 aa1.73□□□□□ -2.13
COPA-203ENST00000481040 PPIP5K1Q6PFW1 1433 aa1.73□□□□□ -2.13
COPA-203ENST00000481040 CEP295Q9C0D2 2601 aa1.72□□□□□ -2.13
COPA-203ENST00000481040 TJP1Q07157 1748 aa1.72□□□□□ -2.13
COPA-203ENST00000481040 XRN1Q8IZH2 1706 aaKnown RBP1.72□□□□□ -2.13
COPA-203ENST00000481040 NHSQ6T4R5 1651 aa1.72□□□□□ -2.13
COPA-203ENST00000481040 FYCO1Q9BQS8 1478 aa1.72□□□□□ -2.13
COPA-203ENST00000481040 LY6G6CO95867 125 aa1.72□□□□□ -2.13
COPA-203ENST00000481040 LINC00032P0C843 101 aa1.72□□□□□ -2.13
COPA-203ENST00000481040 SPINK13Q1W4C9 94 aa1.72□□□□□ -2.13
COPA-203ENST00000481040 LINC00474Q9P2X8 69 aa1.72□□□□□ -2.13
COPA-203ENST00000481040 PDZD2O15018 2839 aa1.72□□□□□ -2.13
COPA-203ENST00000481040 MAP2P11137 1827 aaKnown RBP1.72□□□□□ -2.13
COPA-203ENST00000481040 CRYBG3Q68DQ2 2970 aa1.72□□□□□ -2.13
COPA-203ENST00000481040 MTORP42345 2549 aa1.71□□□□□ -2.14
COPA-203ENST00000481040 LAMA4Q16363 1823 aa1.71□□□□□ -2.14
COPA-203ENST00000481040 EIF2AK4Q9P2K8 1649 aaKnown RBP1.71□□□□□ -2.14
COPA-203ENST00000481040 VAMP8Q9BV40 100 aa1.71□□□□□ -2.14
COPA-203ENST00000481040 AP4S1Q9Y587 144 aa1.71□□□□□ -2.14
COPA-203ENST00000481040 TROQ12816 1431 aaPredicted RBP1.71□□□□□ -2.14
COPA-203ENST00000481040 NSD3Q9BZ95 1437 aa1.71□□□□□ -2.14
COPA-203ENST00000481040 CREBBPQ92793 2442 aa1.71□□□□□ -2.14
COPA-203ENST00000481040 USP9YO00507 2555 aaPredicted RBP1.71□□□□□ -2.14
COPA-203ENST00000481040 INO80Q9ULG1 1556 aaPredicted RBP1.71□□□□□ -2.14
COPA-203ENST00000481040 ARHGAP5Q13017 1502 aa1.71□□□□□ -2.14
COPA-203ENST00000481040 PIK3C2BO00750 1634 aa1.7□□□□□ -2.14
COPA-203ENST00000481040 LRRC37A2A6NM11 1700 aa1.7□□□□□ -2.14
COPA-203ENST00000481040 K7EIL1 84 aa1.7□□□□□ -2.14
COPA-203ENST00000481040 CLIP1P30622 1438 aa1.7□□□□□ -2.14
COPA-203ENST00000481040 MYOZ3Q8TDC0 251 aa1.7□□□□□ -2.14
COPA-203ENST00000481040 CHD7Q9P2D1 2997 aa1.7□□□□□ -2.14
COPA-203ENST00000481040 LOC285556D6RIA3 1793 aa1.7□□□□□ -2.14
COPA-203ENST00000481040 LTN1O94822 1766 aa1.7□□□□□ -2.14
COPA-203ENST00000481040 KIAA1109Q2LD37 5005 aa1.69□□□□□ -2.14
COPA-203ENST00000481040 DMXL2Q8TDJ6 3036 aa1.69□□□□□ -2.14
COPA-203ENST00000481040 TSLPQ969D9 159 aa1.69□□□□□ -2.14
COPA-203ENST00000481040 FAIMQ9NVQ4 179 aa1.69□□□□□ -2.14
COPA-203ENST00000481040 SCP2D1Q9UJQ7 156 aa1.69□□□□□ -2.14
COPA-203ENST00000481040 KIF1AQ12756 1690 aa1.69□□□□□ -2.14
COPA-203ENST00000481040 SIPA1L3O60292 1781 aaPredicted RBP1.69□□□□□ -2.14
COPA-203ENST00000481040 CRYBG1Q9Y4K1 1723 aa1.69□□□□□ -2.14
COPA-203ENST00000481040 KNTC1P50748 2209 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 TENM1Q9UKZ4 2725 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 TCHHQ07283 1943 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 ALS2Q96Q42 1657 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 CELSR1Q9NYQ6 3014 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 AKAP12Q02952 1782 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 LRBAP50851 2863 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 A0A096LNT2 108 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 hADV29S1A0JD25 119 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 GNGT2O14610 69 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 IGLC1P0CG04 106 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 SPINT3P49223 89 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 Q0VG73 95 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 Q96NJ1 140 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 OTOGQ6ZRI0 2925 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 CDC42BPGQ6DT37 1551 aa1.68□□□□□ -2.14
COPA-203ENST00000481040 PI4KAP42356 2102 aa1.67□□□□□ -2.14
COPA-203ENST00000481040 CELSR2Q9HCU4 2923 aa1.67□□□□□ -2.14
COPA-203ENST00000481040 ANKHD1Q8IWZ3 2542 aaKnown RBP1.67□□□□□ -2.14
COPA-203ENST00000481040 TRBV7-3A0A075B6L6 115 aa1.67□□□□□ -2.14
COPA-203ENST00000481040 RPL37P61927 97 aaKnown RBP1.67□□□□□ -2.14
COPA-203ENST00000481040 WNK3Q9BYP7 1800 aa1.67□□□□□ -2.14
COPA-203ENST00000481040 CUBNO60494 3623 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms