RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 C2orf88Q9BSF0 95 aa9.3□□□□□ -0.92
LIMS3-203ENST00000480744 IGIPA6NJ69 53 aa9.29□□□□□ -0.92
LIMS3-203ENST00000480744 PACRGQ96M98 296 aaPredicted RBP9.29□□□□□ -0.92
LIMS3-203ENST00000480744 TRBV30A0A0K0K1B3 111 aa9.28□□□□□ -0.92
LIMS3-203ENST00000480744 M0QXV9 152 aa9.28□□□□□ -0.92
LIMS3-203ENST00000480744 UBE2D1P51668 147 aa9.28□□□□□ -0.92
LIMS3-203ENST00000480744 UBE2BP63146 152 aa9.28□□□□□ -0.92
LIMS3-203ENST00000480744 Q6ZN92 141 aa9.28□□□□□ -0.92
LIMS3-203ENST00000480744 TOMM6Q96B49 74 aa9.28□□□□□ -0.92
LIMS3-203ENST00000480744 A0A096LNJ9 63 aa9.27□□□□□ -0.93
LIMS3-203ENST00000480744 PRR26Q8N8Z3 221 aa9.27□□□□□ -0.93
LIMS3-203ENST00000480744 TOMM7Q9P0U1 55 aa9.27□□□□□ -0.93
LIMS3-203ENST00000480744 NDUFC2-KCTD14E9PQ53 114 aa9.26□□□□□ -0.93
LIMS3-203ENST00000480744 H0Y9J4 135 aa9.26□□□□□ -0.93
LIMS3-203ENST00000480744 SCO1O75880 301 aa9.26□□□□□ -0.93
LIMS3-203ENST00000480744 PRSS2P07478 247 aa9.26□□□□□ -0.93
LIMS3-203ENST00000480744 AMELXQ99217 191 aa9.26□□□□□ -0.93
LIMS3-203ENST00000480744 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
LIMS3-203ENST00000480744 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
LIMS3-203ENST00000480744 VCX2Q9H322 139 aa9.26□□□□□ -0.93
LIMS3-203ENST00000480744 FA2HQ7L5A8 372 aa9.25□□□□□ -0.93
LIMS3-203ENST00000480744 KRTAP7-1Q8IUC3 87 aa9.25□□□□□ -0.93
LIMS3-203ENST00000480744 COLCA2A8K830 154 aa9.24□□□□□ -0.93
LIMS3-203ENST00000480744 CKS1BP61024 79 aa9.24□□□□□ -0.93
LIMS3-203ENST00000480744 C9orf129Q5T035 196 aaKnown RBP9.24□□□□□ -0.93
LIMS3-203ENST00000480744 LINC01561Q8N1V8 128 aa9.24□□□□□ -0.93
LIMS3-203ENST00000480744 TIMM17AQ99595 171 aa9.24□□□□□ -0.93
LIMS3-203ENST00000480744 PMCHL1Q16048 86 aa9.23□□□□□ -0.93
LIMS3-203ENST00000480744 TRGC2P03986 189 aa9.22□□□□□ -0.93
LIMS3-203ENST00000480744 NPSP0C0P6 89 aa9.22□□□□□ -0.93
LIMS3-203ENST00000480744 LINC00614P0C842 121 aa9.22□□□□□ -0.93
LIMS3-203ENST00000480744 C6orf226Q5I0X4 101 aa9.22□□□□□ -0.93
LIMS3-203ENST00000480744 ERASQ7Z444 233 aa9.22□□□□□ -0.93
LIMS3-203ENST00000480744 SCGB3A1Q96QR1 104 aa9.22□□□□□ -0.93
LIMS3-203ENST00000480744 LINC00469Q8N7U9 141 aa9.21□□□□□ -0.94
LIMS3-203ENST00000480744 G0S2P27469 103 aa9.2□□□□□ -0.94
LIMS3-203ENST00000480744 FAM19A3Q7Z5A8 133 aa9.2□□□□□ -0.94
LIMS3-203ENST00000480744 Q8IZM0 81 aa9.2□□□□□ -0.94
LIMS3-203ENST00000480744 IGLV1-50A0A075B6I6 118 aa9.19□□□□□ -0.94
LIMS3-203ENST00000480744 HERVK_113P63121 156 aa9.19□□□□□ -0.94
LIMS3-203ENST00000480744 PAPPA-AS1Q5QFB9 102 aa9.19□□□□□ -0.94
LIMS3-203ENST00000480744 GEMIN7Q9H840 131 aaKnown RBP9.19□□□□□ -0.94
LIMS3-203ENST00000480744 XAGE1AQ9HD64 81 aa9.19□□□□□ -0.94
LIMS3-203ENST00000480744 CDKN2A-AS1Q9UH64 79 aa9.19□□□□□ -0.94
LIMS3-203ENST00000480744 LINC00310P59036 64 aa9.18□□□□□ -0.94
LIMS3-203ENST00000480744 SEC11AP67812 179 aa9.18□□□□□ -0.94
LIMS3-203ENST00000480744 PDZD11Q5EBL8 140 aa9.18□□□□□ -0.94
LIMS3-203ENST00000480744 HBDP02042 147 aa9.17□□□□□ -0.94
LIMS3-203ENST00000480744 KRTAP1-4P0C5Y4 121 aa9.17□□□□□ -0.94
LIMS3-203ENST00000480744 LPAP08519 4548 aa9.17□□□□□ -0.94
LIMS3-203ENST00000480744 LINC01549A6NIU2 74 aa9.16□□□□□ -0.94
LIMS3-203ENST00000480744 CST9LQ9H4G1 147 aa9.16□□□□□ -0.94
LIMS3-203ENST00000480744 C22orf24Q9Y442 160 aa9.16□□□□□ -0.94
LIMS3-203ENST00000480744 F8VRH5 84 aa9.15□□□□□ -0.94
LIMS3-203ENST00000480744 RAB5BP61020 215 aa9.15□□□□□ -0.94
LIMS3-203ENST00000480744 LBHQ53QV2 105 aaPredicted RBP9.15□□□□□ -0.94
LIMS3-203ENST00000480744 PMVKQ15126 192 aa9.14□□□□□ -0.95
LIMS3-203ENST00000480744 CHCHD1Q96BP2 118 aaKnown RBP9.14□□□□□ -0.95
LIMS3-203ENST00000480744 NUPR1O60356 82 aa9.13□□□□□ -0.95
LIMS3-203ENST00000480744 ZNF861PO60384 105 aa9.13□□□□□ -0.95
LIMS3-203ENST00000480744 SERF1AO75920 110 aa9.13□□□□□ -0.95
LIMS3-203ENST00000480744 RPL13AP40429 203 aaKnown RBP9.13□□□□□ -0.95
LIMS3-203ENST00000480744 FAM19A2Q8N3H0 131 aa9.13□□□□□ -0.95
LIMS3-203ENST00000480744 TINCRA0A1B0GVN0 87 aa9.12□□□□□ -0.95
LIMS3-203ENST00000480744 SMIM1B2RUZ4 78 aa9.12□□□□□ -0.95
LIMS3-203ENST00000480744 CXCL5P42830 114 aa9.12□□□□□ -0.95
LIMS3-203ENST00000480744 BAGE3Q86Y29 109 aa9.12□□□□□ -0.95
LIMS3-203ENST00000480744 IGLV5-45A0A087WSX0 123 aa9.11□□□□□ -0.95
LIMS3-203ENST00000480744 MRPL55Q7Z7F7 128 aaKnown RBP9.11□□□□□ -0.95
LIMS3-203ENST00000480744 COX7B2Q8TF08 81 aa9.11□□□□□ -0.95
LIMS3-203ENST00000480744 ATP6V1G1O75348 118 aa9.1□□□□□ -0.95
LIMS3-203ENST00000480744 PRR4Q16378 134 aa9.1□□□□□ -0.95
LIMS3-203ENST00000480744 HSBP1O75506 76 aa9.09□□□□□ -0.95
LIMS3-203ENST00000480744 ATP5LO75964 103 aa9.09□□□□□ -0.95
LIMS3-203ENST00000480744 SPINK8P0C7L1 97 aa9.09□□□□□ -0.95
LIMS3-203ENST00000480744 IGLC3P0DOY3 106 aa9.09□□□□□ -0.95
LIMS3-203ENST00000480744 NDUFA6P56556 154 aa9.09□□□□□ -0.95
LIMS3-203ENST00000480744 TP73-AS1Q9UF72 201 aa9.09□□□□□ -0.95
LIMS3-203ENST00000480744 GAGE10A6NGK3 116 aa9.08□□□□□ -0.96
LIMS3-203ENST00000480744 RPL37AP8A6NKH3 93 aa9.08□□□□□ -0.96
LIMS3-203ENST00000480744 HIST1H2BKO60814 126 aa9.08□□□□□ -0.96
LIMS3-203ENST00000480744 HIST1H2BJP06899 126 aa9.08□□□□□ -0.96
LIMS3-203ENST00000480744 HIST1H2BOP23527 126 aa9.08□□□□□ -0.96
LIMS3-203ENST00000480744 HIST1H2BBP33778 126 aa9.08□□□□□ -0.96
LIMS3-203ENST00000480744 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
LIMS3-203ENST00000480744 HIST1H2BDP58876 126 aa9.08□□□□□ -0.96
LIMS3-203ENST00000480744 HIST1H2BCP62807 126 aa9.08□□□□□ -0.96
LIMS3-203ENST00000480744 HIST2H2BEQ16778 126 aa9.08□□□□□ -0.96
LIMS3-203ENST00000480744 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.08□□□□□ -0.96
LIMS3-203ENST00000480744 HIST1H2BHQ93079 126 aa9.08□□□□□ -0.96
LIMS3-203ENST00000480744 HIST1H2BNQ99877 126 aa9.08□□□□□ -0.96
LIMS3-203ENST00000480744 HIST1H2BMQ99879 126 aa9.08□□□□□ -0.96
LIMS3-203ENST00000480744 BCE1O60756 84 aa9.07□□□□□ -0.96
LIMS3-203ENST00000480744 ZNF22P17026 224 aaPredicted RBP9.07□□□□□ -0.96
LIMS3-203ENST00000480744 IFI27L1Q96BM0 104 aa9.07□□□□□ -0.96
LIMS3-203ENST00000480744 LINC00167Q96N53 147 aa9.07□□□□□ -0.96
LIMS3-203ENST00000480744 C11orf86A6NJI1 115 aa9.06□□□□□ -0.96
LIMS3-203ENST00000480744 TSPAN13O95857 204 aa9.05□□□□□ -0.96
LIMS3-203ENST00000480744 H3BRM9 83 aa9.04□□□□□ -0.96
LIMS3-203ENST00000480744 NKAPP1Q8N9T2 125 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms