RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 TRAV8-4A0A0B4J246 113 aa18.85■□□□□ 0.61
TNFRSF25-213ENST00000480393 HUWE1Q7Z6Z7 4374 aaKnown RBP18.84■□□□□ 0.61
TNFRSF25-213ENST00000480393 A0A0B4J2C4 111 aa18.84■□□□□ 0.61
TNFRSF25-213ENST00000480393 CFAP161Q6P656 301 aa18.84■□□□□ 0.61
TNFRSF25-213ENST00000480393 GAGE10A6NGK3 116 aa18.83■□□□□ 0.61
TNFRSF25-213ENST00000480393 LINC01556Q5JQF7 62 aa18.83■□□□□ 0.61
TNFRSF25-213ENST00000480393 GTF2H5Q6ZYL4 71 aa18.83■□□□□ 0.61
TNFRSF25-213ENST00000480393 PRO1854Q9UHT4 67 aa18.83■□□□□ 0.61
TNFRSF25-213ENST00000480393 LINC00308Q8TCZ7 52 aa18.83■□□□□ 0.6
TNFRSF25-213ENST00000480393 SPCS1Q9Y6A9 102 aa18.83■□□□□ 0.6
TNFRSF25-213ENST00000480393 K7EP34 96 aa18.81■□□□□ 0.6
TNFRSF25-213ENST00000480393 TSPAN13O95857 204 aa18.81■□□□□ 0.6
TNFRSF25-213ENST00000480393 CKS1BP61024 79 aa18.8■□□□□ 0.6
TNFRSF25-213ENST00000480393 IBA57-AS1B1ANH7 110 aa18.79■□□□□ 0.6
TNFRSF25-213ENST00000480393 CCL18P55774 89 aa18.79■□□□□ 0.6
TNFRSF25-213ENST00000480393 LINC00158P58513 81 aa18.79■□□□□ 0.6
TNFRSF25-213ENST00000480393 CXCL5P42830 114 aa18.78■□□□□ 0.6
TNFRSF25-213ENST00000480393 EIF4EBP3O60516 100 aaPredicted RBP18.77■□□□□ 0.6
TNFRSF25-213ENST00000480393 LINC00588Q9Y4M8 146 aa18.77■□□□□ 0.6
TNFRSF25-213ENST00000480393 KIAA0087Q14695 138 aa18.76■□□□□ 0.59
TNFRSF25-213ENST00000480393 C2orf82Q6UX34 121 aa18.76■□□□□ 0.59
TNFRSF25-213ENST00000480393 KLK5Q9Y337 293 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF25-213ENST00000480393 NHLRC4P0CG21 123 aaPredicted RBP18.75■□□□□ 0.59
TNFRSF25-213ENST00000480393 DNAH10OSP0CZ25 163 aa18.75■□□□□ 0.59
TNFRSF25-213ENST00000480393 MIR7-3HGQ8N6C7 128 aa18.75■□□□□ 0.59
TNFRSF25-213ENST00000480393 ERG28Q9UKR5 140 aa18.75■□□□□ 0.59
TNFRSF25-213ENST00000480393 PFN2P35080 140 aa18.74■□□□□ 0.59
TNFRSF25-213ENST00000480393 SPAG11BQ08648 103 aa18.74■□□□□ 0.59
TNFRSF25-213ENST00000480393 SOSTDC1Q6X4U4 206 aa18.74■□□□□ 0.59
TNFRSF25-213ENST00000480393 H7C2G1 150 aa18.72■□□□□ 0.59
TNFRSF25-213ENST00000480393 Q1RN00 199 aa18.72■□□□□ 0.59
TNFRSF25-213ENST00000480393 LOC107984156A0A0G2JMH3 177 aa18.71■□□□□ 0.59
TNFRSF25-213ENST00000480393 ARL17AQ8IVW1 177 aa18.71■□□□□ 0.59
TNFRSF25-213ENST00000480393 PPDPFQ9H3Y8 114 aa18.71■□□□□ 0.59
TNFRSF25-213ENST00000480393 LYRM7Q5U5X0 104 aa18.71■□□□□ 0.59
TNFRSF25-213ENST00000480393 C1orf43Q9BWL3 253 aa18.71■□□□□ 0.59
TNFRSF25-213ENST00000480393 PSMB2P49721 201 aa18.67■□□□□ 0.58
TNFRSF25-213ENST00000480393 IGKV2D-24A0A075B6R9 120 aa18.66■□□□□ 0.58
TNFRSF25-213ENST00000480393 KRTAP26-1Q6PEX3 210 aa18.66■□□□□ 0.58
TNFRSF25-213ENST00000480393 RPL13AP40429 203 aaKnown RBP18.65■□□□□ 0.58
TNFRSF25-213ENST00000480393 C6orf223Q8N319 242 aa18.64■□□□□ 0.57
TNFRSF25-213ENST00000480393 UPK3BQ9BT76 320 aa18.64■□□□□ 0.57
TNFRSF25-213ENST00000480393 Q9HAA7 133 aa18.63■□□□□ 0.57
TNFRSF25-213ENST00000480393 DNAH9Q9NYC9 4486 aa18.63■□□□□ 0.57
TNFRSF25-213ENST00000480393 SCGB1C2P0DMR2 95 aa18.63■□□□□ 0.57
TNFRSF25-213ENST00000480393 COX17Q14061 63 aa18.62■□□□□ 0.57
TNFRSF25-213ENST00000480393 LINC00526Q96FQ7 95 aa18.62■□□□□ 0.57
TNFRSF25-213ENST00000480393 SND1-IT1Q9HBX3 110 aa18.62■□□□□ 0.57
TNFRSF25-213ENST00000480393 UNQ6190/PRO20217Q6UXQ8 127 aa18.6■□□□□ 0.57
TNFRSF25-213ENST00000480393 ZNF561-AS1K7EIQ3 104 aa18.59■□□□□ 0.57
TNFRSF25-213ENST00000480393 HIGD2BQ4VC39 106 aa18.57■□□□□ 0.56
TNFRSF25-213ENST00000480393 C9orf116Q5BN46 136 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF25-213ENST00000480393 C10orf25Q5T742 122 aa18.57■□□□□ 0.56
TNFRSF25-213ENST00000480393 NTN5Q8WTR8 489 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF25-213ENST00000480393 COL7A1Q02388 2944 aa18.57■□□□□ 0.56
TNFRSF25-213ENST00000480393 H3BMG7 143 aa18.57■□□□□ 0.56
TNFRSF25-213ENST00000480393 APLNQ9ULZ1 77 aa18.57■□□□□ 0.56
TNFRSF25-213ENST00000480393 UBE2DNLQ8IWF7 75 aa18.56■□□□□ 0.56
TNFRSF25-213ENST00000480393 TRBV30A0A0K0K1B3 111 aa18.55■□□□□ 0.56
TNFRSF25-213ENST00000480393 TRBV20-1A0A075B6N2 111 aa18.54■□□□□ 0.56
TNFRSF25-213ENST00000480393 NUPR2A6NF83 97 aa18.54■□□□□ 0.56
TNFRSF25-213ENST00000480393 TRIAP1O43715 76 aa18.54■□□□□ 0.56
TNFRSF25-213ENST00000480393 C15orf56Q8N910 161 aa18.54■□□□□ 0.56
TNFRSF25-213ENST00000480393 TRAV13-2A0A0B4J235 113 aa18.54■□□□□ 0.56
TNFRSF25-213ENST00000480393 RMI2Q96E14 147 aa18.54■□□□□ 0.56
TNFRSF25-213ENST00000480393 STAB2Q8WWQ8 2551 aa18.54■□□□□ 0.56
TNFRSF25-213ENST00000480393 CAMK2N2Q96S95 79 aa18.52■□□□□ 0.56
TNFRSF25-213ENST00000480393 GVQW2A0A096LPI5 108 aaPredicted RBP18.52■□□□□ 0.55
TNFRSF25-213ENST00000480393 TCL1BO95988 128 aa18.52■□□□□ 0.55
TNFRSF25-213ENST00000480393 COX6CP09669 75 aa18.51■□□□□ 0.55
TNFRSF25-213ENST00000480393 MUC7Q8TAX7 377 aa18.51■□□□□ 0.55
TNFRSF25-213ENST00000480393 IGKV2-28A0A075B6P5 120 aa18.49■□□□□ 0.55
TNFRSF25-213ENST00000480393 IGKV2D-28P01615 120 aa18.49■□□□□ 0.55
TNFRSF25-213ENST00000480393 C6orf48Q9UBA6 75 aa18.49■□□□□ 0.55
TNFRSF25-213ENST00000480393 DNHD1Q96M86 4753 aa18.48■□□□□ 0.55
TNFRSF25-213ENST00000480393 C2orf48Q96LS8 159 aa18.48■□□□□ 0.55
TNFRSF25-213ENST00000480393 LINC00337Q8N6G1 96 aa18.46■□□□□ 0.55
TNFRSF25-213ENST00000480393 F8W1H4 67 aa18.46■□□□□ 0.55
TNFRSF25-213ENST00000480393 F8WDY8 70 aa18.43■□□□□ 0.54
TNFRSF25-213ENST00000480393 ATXN8Q156A1 80 aa18.43■□□□□ 0.54
TNFRSF25-213ENST00000480393 MTURNQ8N3F0 131 aa18.43■□□□□ 0.54
TNFRSF25-213ENST00000480393 Q6ZRU5 148 aa18.42■□□□□ 0.54
TNFRSF25-213ENST00000480393 NDUFC2O95298 119 aa18.41■□□□□ 0.54
TNFRSF25-213ENST00000480393 OR13C6PQ8NH95 151 aa18.4■□□□□ 0.54
TNFRSF25-213ENST00000480393 PRO0461Q9UI25 63 aa18.39■□□□□ 0.53
TNFRSF25-213ENST00000480393 USP17L23D6RBM5 183 aa18.37■□□□□ 0.53
TNFRSF25-213ENST00000480393 MEGF8Q7Z7M0 2845 aa18.37■□□□□ 0.53
TNFRSF25-213ENST00000480393 SYCNQ0VAF6 134 aa18.37■□□□□ 0.53
TNFRSF25-213ENST00000480393 WFDC2Q14508 124 aa18.37■□□□□ 0.53
TNFRSF25-213ENST00000480393 CASC10Q5T4H9 136 aa18.37■□□□□ 0.53
TNFRSF25-213ENST00000480393 CLEC2BQ92478 149 aa18.36■□□□□ 0.53
TNFRSF25-213ENST00000480393 RPL28P46779 137 aaKnown RBP18.35■□□□□ 0.53
TNFRSF25-213ENST00000480393 KRTAP1-5Q9BYS1 174 aa18.35■□□□□ 0.53
TNFRSF25-213ENST00000480393 DYNC2H1Q8NCM8 4307 aaKnown RBP18.33■□□□□ 0.52
TNFRSF25-213ENST00000480393 NCR3O14931 201 aa18.32■□□□□ 0.52
TNFRSF25-213ENST00000480393 PRR3P79522 188 aaKnown RBP18.32■□□□□ 0.52
TNFRSF25-213ENST00000480393 LINC01620Q4KN68 170 aa18.32■□□□□ 0.52
TNFRSF25-213ENST00000480393 SMIM11BQ8TCY0 68 aa18.32■□□□□ 0.52
TNFRSF25-213ENST00000480393 C9JAW5 83 aa18.32■□□□□ 0.52
TNFRSF25-213ENST00000480393 LST1O00453 97 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms