RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 HIST1H2BBP33778 126 aa11.16□□□□□ -0.62
PRKCD-204ENST00000477794 HIST1H2BDP58876 126 aa11.16□□□□□ -0.62
PRKCD-204ENST00000477794 HIST1H2BCP62807 126 aa11.16□□□□□ -0.62
PRKCD-204ENST00000477794 HIST2H2BEQ16778 126 aa11.16□□□□□ -0.62
PRKCD-204ENST00000477794 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.16□□□□□ -0.62
PRKCD-204ENST00000477794 HIST1H2BHQ93079 126 aa11.16□□□□□ -0.62
PRKCD-204ENST00000477794 HIST1H2BNQ99877 126 aa11.16□□□□□ -0.62
PRKCD-204ENST00000477794 HIST1H2BMQ99879 126 aa11.16□□□□□ -0.62
PRKCD-204ENST00000477794 PRSS2P07478 247 aa11.15□□□□□ -0.62
PRKCD-204ENST00000477794 LBHQ53QV2 105 aaPredicted RBP11.15□□□□□ -0.62
PRKCD-204ENST00000477794 MAP1LC3AQ9H492 121 aa11.15□□□□□ -0.62
PRKCD-204ENST00000477794 MUC2Q02817 5179 aa11.15□□□□□ -0.62
PRKCD-204ENST00000477794 NUPR1O60356 82 aa11.14□□□□□ -0.63
PRKCD-204ENST00000477794 ZNF861PO60384 105 aa11.14□□□□□ -0.63
PRKCD-204ENST00000477794 KIAA0087Q14695 138 aa11.14□□□□□ -0.63
PRKCD-204ENST00000477794 LINC01561Q8N1V8 128 aa11.14□□□□□ -0.63
PRKCD-204ENST00000477794 FAM104AQ969W3 186 aa11.14□□□□□ -0.63
PRKCD-204ENST00000477794 C2orf88Q9BSF0 95 aa11.14□□□□□ -0.63
PRKCD-204ENST00000477794 PYGO1Q9Y3Y4 419 aa11.14□□□□□ -0.63
PRKCD-204ENST00000477794 NPYP01303 97 aa11.13□□□□□ -0.63
PRKCD-204ENST00000477794 S100A6P06703 90 aa11.13□□□□□ -0.63
PRKCD-204ENST00000477794 CKS1BP61024 79 aa11.13□□□□□ -0.63
PRKCD-204ENST00000477794 LINC00242Q5T6M2 205 aa11.13□□□□□ -0.63
PRKCD-204ENST00000477794 TEX43Q6ZNM6 134 aa11.13□□□□□ -0.63
PRKCD-204ENST00000477794 BAGE3Q86Y29 109 aa11.13□□□□□ -0.63
PRKCD-204ENST00000477794 C18orf32Q8TCD1 76 aa11.13□□□□□ -0.63
PRKCD-204ENST00000477794 TMEM141Q96I45 108 aa11.13□□□□□ -0.63
PRKCD-204ENST00000477794 PRSS47A8MTI9 375 aa11.12□□□□□ -0.63
PRKCD-204ENST00000477794 C2orf82Q6UX34 121 aa11.12□□□□□ -0.63
PRKCD-204ENST00000477794 Q6ZN92 141 aa11.12□□□□□ -0.63
PRKCD-204ENST00000477794 KRTAP7-1Q8IUC3 87 aa11.12□□□□□ -0.63
PRKCD-204ENST00000477794 NXT2Q9NPJ8 142 aaKnown RBP11.12□□□□□ -0.63
PRKCD-204ENST00000477794 TMA7Q9Y2S6 64 aaKnown RBP11.12□□□□□ -0.63
PRKCD-204ENST00000477794 C9orf129Q5T035 196 aaKnown RBP11.11□□□□□ -0.63
PRKCD-204ENST00000477794 RPL28P46779 137 aaKnown RBP11.1□□□□□ -0.63
PRKCD-204ENST00000477794 NDUFA6P56556 154 aa11.1□□□□□ -0.63
PRKCD-204ENST00000477794 FA2HQ7L5A8 372 aa11.1□□□□□ -0.63
PRKCD-204ENST00000477794 IGLV4-3A0A075B6K6 122 aa11.09□□□□□ -0.63
PRKCD-204ENST00000477794 LOC389332A0A1B0GUA5 103 aa11.09□□□□□ -0.63
PRKCD-204ENST00000477794 C6orf226Q5I0X4 101 aa11.09□□□□□ -0.63
PRKCD-204ENST00000477794 K7EMI3 77 aa11.08□□□□□ -0.64
PRKCD-204ENST00000477794 TSPAN13O95857 204 aa11.08□□□□□ -0.64
PRKCD-204ENST00000477794 COA6Q5JTJ3 125 aaKnown RBP11.08□□□□□ -0.64
PRKCD-204ENST00000477794 Q8N8P6 123 aa11.08□□□□□ -0.64
PRKCD-204ENST00000477794 CHCHD1Q96BP2 118 aaKnown RBP11.08□□□□□ -0.64
PRKCD-204ENST00000477794 LINC00614P0C842 121 aa11.07□□□□□ -0.64
PRKCD-204ENST00000477794 CRYGAP11844 174 aa11.07□□□□□ -0.64
PRKCD-204ENST00000477794 TOMM7Q9P0U1 55 aa11.07□□□□□ -0.64
PRKCD-204ENST00000477794 C22orf24Q9Y442 160 aa11.07□□□□□ -0.64
PRKCD-204ENST00000477794 VCX2Q9H322 139 aa11.06□□□□□ -0.64
PRKCD-204ENST00000477794 CYSLTR1Q9Y271 337 aa11.06□□□□□ -0.64
PRKCD-204ENST00000477794 HSBP1O75506 76 aa11.05□□□□□ -0.64
PRKCD-204ENST00000477794 G0S2P27469 103 aa11.05□□□□□ -0.64
PRKCD-204ENST00000477794 SEC11AP67812 179 aa11.05□□□□□ -0.64
PRKCD-204ENST00000477794 Q8IZM0 81 aa11.05□□□□□ -0.64
PRKCD-204ENST00000477794 TP73-AS1Q9UF72 201 aa11.05□□□□□ -0.64
PRKCD-204ENST00000477794 SERF1AO75920 110 aa11.04□□□□□ -0.64
PRKCD-204ENST00000477794 NPSP0C0P6 89 aa11.04□□□□□ -0.64
PRKCD-204ENST00000477794 ORMDL2Q53FV1 153 aa11.04□□□□□ -0.64
PRKCD-204ENST00000477794 TYMSOSQ8TAI1 123 aa11.04□□□□□ -0.64
PRKCD-204ENST00000477794 LINC01546A6NGU7 62 aa11.03□□□□□ -0.64
PRKCD-204ENST00000477794 BCE1O60756 84 aa11.03□□□□□ -0.64
PRKCD-204ENST00000477794 PAPPA-AS1Q5QFB9 102 aa11.03□□□□□ -0.64
PRKCD-204ENST00000477794 MRPL55Q7Z7F7 128 aaKnown RBP11.03□□□□□ -0.64
PRKCD-204ENST00000477794 LINC00469Q8N7U9 141 aa11.03□□□□□ -0.64
PRKCD-204ENST00000477794 XAGE1AQ9HD64 81 aa11.03□□□□□ -0.64
PRKCD-204ENST00000477794 LINC01549A6NIU2 74 aa11.01□□□□□ -0.65
PRKCD-204ENST00000477794 F8VRH5 84 aa11.01□□□□□ -0.65
PRKCD-204ENST00000477794 S100A2P29034 98 aa11.01□□□□□ -0.65
PRKCD-204ENST00000477794 SNRPEP62304 92 aaKnown RBP11.01□□□□□ -0.65
PRKCD-204ENST00000477794 HERVK_113P63121 156 aa11.01□□□□□ -0.65
PRKCD-204ENST00000477794 C2orf66Q6UXQ4 117 aa11.01□□□□□ -0.65
PRKCD-204ENST00000477794 KRTAP9-2Q9BYQ4 174 aa11.01□□□□□ -0.65
PRKCD-204ENST00000477794 C5orf52A6NGY3 159 aa11□□□□□ -0.65
PRKCD-204ENST00000477794 CXCL5P42830 114 aa11□□□□□ -0.65
PRKCD-204ENST00000477794 URB1-AS1Q96HZ7 61 aa11□□□□□ -0.65
PRKCD-204ENST00000477794 AMELXQ99217 191 aa10.99□□□□□ -0.65
PRKCD-204ENST00000477794 GEMIN7Q9H840 131 aaKnown RBP10.99□□□□□ -0.65
PRKCD-204ENST00000477794 LINC00310P59036 64 aa10.98□□□□□ -0.65
PRKCD-204ENST00000477794 A0A087X002 238 aa10.97□□□□□ -0.65
PRKCD-204ENST00000477794 HBDP02042 147 aa10.97□□□□□ -0.65
PRKCD-204ENST00000477794 PDZD11Q5EBL8 140 aa10.96□□□□□ -0.65
PRKCD-204ENST00000477794 LINC00173Q6ZV60 143 aa10.96□□□□□ -0.65
PRKCD-204ENST00000477794 FAM19A3Q7Z5A8 133 aa10.96□□□□□ -0.65
PRKCD-204ENST00000477794 HIST3H2BBQ8N257 126 aa10.96□□□□□ -0.65
PRKCD-204ENST00000477794 FAM19A2Q8N3H0 131 aa10.95□□□□□ -0.66
PRKCD-204ENST00000477794 UBE2AP49459 152 aa10.94□□□□□ -0.66
PRKCD-204ENST00000477794 HSPB8Q9UJY1 196 aa10.94□□□□□ -0.66
PRKCD-204ENST00000477794 IGIPA6NJ69 53 aa10.93□□□□□ -0.66
PRKCD-204ENST00000477794 LEPROTL1O95214 131 aa10.93□□□□□ -0.66
PRKCD-204ENST00000477794 PMCHL1Q16048 86 aa10.93□□□□□ -0.66
PRKCD-204ENST00000477794 FAM229BQ4G0N7 80 aa10.93□□□□□ -0.66
PRKCD-204ENST00000477794 ZC2HC1BQ5TFG8 222 aa10.93□□□□□ -0.66
PRKCD-204ENST00000477794 NKAPP1Q8N9T2 125 aa10.93□□□□□ -0.66
PRKCD-204ENST00000477794 TOMM6Q96B49 74 aa10.93□□□□□ -0.66
PRKCD-204ENST00000477794 CDIP1Q9H305 208 aa10.93□□□□□ -0.66
PRKCD-204ENST00000477794 CDKN2A-AS1Q9UH64 79 aa10.93□□□□□ -0.66
PRKCD-204ENST00000477794 RPL37AP8A6NKH3 93 aa10.92□□□□□ -0.66
PRKCD-204ENST00000477794 LINC00304Q8N9R0 145 aa10.92□□□□□ -0.66
PRKCD-204ENST00000477794 LINC00167Q96N53 147 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms