RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 A0A087WZ39 114 aa11.5□□□□□ -0.57
TVP23B-202ENST00000476139 LINC00158P58513 81 aa11.5□□□□□ -0.57
TVP23B-202ENST00000476139 STAB1Q9NY15 2570 aa11.49□□□□□ -0.57
TVP23B-202ENST00000476139 HTN3P15516 51 aa11.49□□□□□ -0.57
TVP23B-202ENST00000476139 A0A1B0GUV1 79 aa11.49□□□□□ -0.57
TVP23B-202ENST00000476139 H3BT86 120 aa11.48□□□□□ -0.57
TVP23B-202ENST00000476139 TTC32Q5I0X7 151 aa11.48□□□□□ -0.57
TVP23B-202ENST00000476139 FAM218AQ96MZ4 157 aa11.48□□□□□ -0.57
TVP23B-202ENST00000476139 COX7A2LO14548 114 aa11.47□□□□□ -0.57
TVP23B-202ENST00000476139 SNCGO76070 127 aa11.47□□□□□ -0.57
TVP23B-202ENST00000476139 LINC00269Q8N2A0 174 aa11.47□□□□□ -0.57
TVP23B-202ENST00000476139 C15orf53Q8NAA6 179 aa11.47□□□□□ -0.57
TVP23B-202ENST00000476139 MIFP14174 115 aa11.46□□□□□ -0.57
TVP23B-202ENST00000476139 SHISA2Q6UWI4 295 aa11.46□□□□□ -0.57
TVP23B-202ENST00000476139 Q9HAA7 133 aa11.46□□□□□ -0.57
TVP23B-202ENST00000476139 ATP5G1P05496 136 aa11.46□□□□□ -0.58
TVP23B-202ENST00000476139 LINC00337Q8N6G1 96 aa11.46□□□□□ -0.58
TVP23B-202ENST00000476139 IGLV10-54A0A075B6I4 117 aa11.45□□□□□ -0.58
TVP23B-202ENST00000476139 SND1-IT1Q9HBX3 110 aa11.45□□□□□ -0.58
TVP23B-202ENST00000476139 SS18Q15532 418 aa11.45□□□□□ -0.58
TVP23B-202ENST00000476139 WIPF1O43516 503 aa11.44□□□□□ -0.58
TVP23B-202ENST00000476139 SPART-AS1P0CW21 52 aa11.44□□□□□ -0.58
TVP23B-202ENST00000476139 GAGE2BQ13066 116 aa11.44□□□□□ -0.58
TVP23B-202ENST00000476139 GAGE2EQ4V326 116 aa11.44□□□□□ -0.58
TVP23B-202ENST00000476139 C6orf226Q5I0X4 101 aa11.44□□□□□ -0.58
TVP23B-202ENST00000476139 GAGE2DQ9UEU5 116 aa11.44□□□□□ -0.58
TVP23B-202ENST00000476139 IGKV2-28A0A075B6P5 120 aa11.43□□□□□ -0.58
TVP23B-202ENST00000476139 IGKV2D-28P01615 120 aa11.43□□□□□ -0.58
TVP23B-202ENST00000476139 KRTAP10-11P60412 298 aa11.43□□□□□ -0.58
TVP23B-202ENST00000476139 ANGP03950 147 aaKnown RBP11.43□□□□□ -0.58
TVP23B-202ENST00000476139 COPS9Q8WXC6 57 aa11.43□□□□□ -0.58
TVP23B-202ENST00000476139 LINC01600Q96MT4 127 aa11.43□□□□□ -0.58
TVP23B-202ENST00000476139 ANAPC13Q9BS18 74 aa11.42□□□□□ -0.58
TVP23B-202ENST00000476139 CRPP02741 224 aa11.42□□□□□ -0.58
TVP23B-202ENST00000476139 CCL18P55774 89 aa11.42□□□□□ -0.58
TVP23B-202ENST00000476139 BAALC-AS2P0C853 105 aa11.41□□□□□ -0.58
TVP23B-202ENST00000476139 RETNQ9HD89 108 aa11.41□□□□□ -0.58
TVP23B-202ENST00000476139 KRTAP24-1Q3LI83 254 aa11.41□□□□□ -0.58
TVP23B-202ENST00000476139 REG3AQ06141 175 aa11.4□□□□□ -0.59
TVP23B-202ENST00000476139 OR13C6PQ8NH95 151 aa11.4□□□□□ -0.59
TVP23B-202ENST00000476139 MAST4O15021 2626 aa11.39□□□□□ -0.59
TVP23B-202ENST00000476139 CHCHD10Q8WYQ3 142 aaPredicted RBP11.39□□□□□ -0.59
TVP23B-202ENST00000476139 IBA57-AS1B1ANH7 110 aa11.38□□□□□ -0.59
TVP23B-202ENST00000476139 MRPL23Q16540 153 aaKnown RBP11.38□□□□□ -0.59
TVP23B-202ENST00000476139 SMIM11BQ8TCY0 68 aa11.38□□□□□ -0.59
TVP23B-202ENST00000476139 TRAV13-2A0A0B4J235 113 aa11.37□□□□□ -0.59
TVP23B-202ENST00000476139 A0A087WYN8 130 aa11.37□□□□□ -0.59
TVP23B-202ENST00000476139 PRR3P79522 188 aaKnown RBP11.37□□□□□ -0.59
TVP23B-202ENST00000476139 TENM3Q9P273 2699 aa11.37□□□□□ -0.59
TVP23B-202ENST00000476139 CD164L2Q6UWJ8 174 aa11.36□□□□□ -0.59
TVP23B-202ENST00000476139 C22orf24Q9Y442 160 aa11.36□□□□□ -0.59
TVP23B-202ENST00000476139 CMYA5Q8N3K9 4069 aa11.36□□□□□ -0.59
TVP23B-202ENST00000476139 NHLRC4P0CG21 123 aaPredicted RBP11.35□□□□□ -0.59
TVP23B-202ENST00000476139 Q8IZM0 81 aa11.35□□□□□ -0.59
TVP23B-202ENST00000476139 RPL28P46779 137 aaKnown RBP11.34□□□□□ -0.59
TVP23B-202ENST00000476139 NOTCH1P46531 2555 aa11.34□□□□□ -0.59
TVP23B-202ENST00000476139 NDUFV3P56181 108 aaKnown RBP11.34□□□□□ -0.59
TVP23B-202ENST00000476139 KIAA0087Q14695 138 aa11.34□□□□□ -0.59
TVP23B-202ENST00000476139 DEFB121Q5J5C9 76 aa11.34□□□□□ -0.59
TVP23B-202ENST00000476139 TRACP01848 142 aa11.34□□□□□ -0.59
TVP23B-202ENST00000476139 PPDPFQ9H3Y8 114 aa11.34□□□□□ -0.59
TVP23B-202ENST00000476139 C9orf129Q5T035 196 aaKnown RBP11.33□□□□□ -0.6
TVP23B-202ENST00000476139 C3orf56Q8N813 242 aa11.33□□□□□ -0.6
TVP23B-202ENST00000476139 SLPIP03973 132 aa11.33□□□□□ -0.6
TVP23B-202ENST00000476139 MALP21145 153 aa11.33□□□□□ -0.6
TVP23B-202ENST00000476139 C9orf116Q5BN46 136 aaPredicted RBP11.33□□□□□ -0.6
TVP23B-202ENST00000476139 LELP1Q5T871 98 aa11.33□□□□□ -0.6
TVP23B-202ENST00000476139 KLK12Q9UKR0 248 aa11.33□□□□□ -0.6
TVP23B-202ENST00000476139 LINC00526Q96FQ7 95 aa11.32□□□□□ -0.6
TVP23B-202ENST00000476139 LYPD5Q6UWN5 251 aa11.31□□□□□ -0.6
TVP23B-202ENST00000476139 COL6A5A8TX70 2615 aa11.31□□□□□ -0.6
TVP23B-202ENST00000476139 SMCR5Q8TEV8 140 aa11.31□□□□□ -0.6
TVP23B-202ENST00000476139 LECT2O14960 151 aa11.3□□□□□ -0.6
TVP23B-202ENST00000476139 DNAL4O96015 105 aa11.3□□□□□ -0.6
TVP23B-202ENST00000476139 GAGE2AQ6NT46 116 aa11.3□□□□□ -0.6
TVP23B-202ENST00000476139 Q6ZTC4 211 aa11.3□□□□□ -0.6
TVP23B-202ENST00000476139 C6orf223Q8N319 242 aa11.29□□□□□ -0.6
TVP23B-202ENST00000476139 ENHOQ6UWT2 76 aa11.28□□□□□ -0.6
TVP23B-202ENST00000476139 B5MCH6 92 aa11.28□□□□□ -0.6
TVP23B-202ENST00000476139 EGFEM1PQ0D2K5 195 aa11.28□□□□□ -0.6
TVP23B-202ENST00000476139 CFAP161Q6P656 301 aa11.28□□□□□ -0.6
TVP23B-202ENST00000476139 LINC01561Q8N1V8 128 aa11.28□□□□□ -0.6
TVP23B-202ENST00000476139 FAM240AA0A1B0GVK7 77 aa11.28□□□□□ -0.6
TVP23B-202ENST00000476139 CCDC179H3BU77 68 aa11.28□□□□□ -0.6
TVP23B-202ENST00000476139 C10orf25Q5T742 122 aa11.27□□□□□ -0.61
TVP23B-202ENST00000476139 KPRPQ5T749 579 aaPredicted RBP11.26□□□□□ -0.61
TVP23B-202ENST00000476139 PRR34Q9NV39 138 aa11.26□□□□□ -0.61
TVP23B-202ENST00000476139 C14orf132Q9NPU4 83 aa11.26□□□□□ -0.61
TVP23B-202ENST00000476139 UNQ6190/PRO20217Q6UXQ8 127 aa11.25□□□□□ -0.61
TVP23B-202ENST00000476139 WFDC10BQ8IUB3 73 aa11.25□□□□□ -0.61
TVP23B-202ENST00000476139 NBEAL1Q6ZS30 2694 aa11.24□□□□□ -0.61
TVP23B-202ENST00000476139 A0A0J9YWU9 116 aa11.24□□□□□ -0.61
TVP23B-202ENST00000476139 NCR3O14931 201 aa11.23□□□□□ -0.61
TVP23B-202ENST00000476139 Q6Q795 121 aa11.23□□□□□ -0.61
TVP23B-202ENST00000476139 SS18L2Q9UHA2 77 aa11.23□□□□□ -0.61
TVP23B-202ENST00000476139 CYSRT1A8MQ03 144 aa11.23□□□□□ -0.61
TVP23B-202ENST00000476139 Q8NDZ9 215 aa11.23□□□□□ -0.61
TVP23B-202ENST00000476139 PRB2P02812 416 aaPredicted RBP11.22□□□□□ -0.61
TVP23B-202ENST00000476139 NANOS2P60321 138 aaKnown RBP11.22□□□□□ -0.61
TVP23B-202ENST00000476139 CXCL5P42830 114 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms