RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 FAM104BQ5XKR9 115 aa7.95□□□□□ -1.14
HLA-DOB-208ENST00000475235 UBE2WQ96B02 151 aa7.95□□□□□ -1.14
HLA-DOB-208ENST00000475235 ICOSQ9Y6W8 199 aa7.95□□□□□ -1.14
HLA-DOB-208ENST00000475235 TRBV25-1A0A075B6N4 114 aa7.94□□□□□ -1.14
HLA-DOB-208ENST00000475235 TRGV4A0A0C4DH28 118 aa7.94□□□□□ -1.14
HLA-DOB-208ENST00000475235 IGHV3-16A0A0C4DH30 117 aa7.94□□□□□ -1.14
HLA-DOB-208ENST00000475235 A0A1B0GVY2 172 aa7.94□□□□□ -1.14
HLA-DOB-208ENST00000475235 HBDP02042 147 aa7.94□□□□□ -1.14
HLA-DOB-208ENST00000475235 MGST1P10620 155 aaKnown RBP7.94□□□□□ -1.14
HLA-DOB-208ENST00000475235 FHL2Q14192 279 aa7.94□□□□□ -1.14
HLA-DOB-208ENST00000475235 C6orf223Q8N319 242 aa7.94□□□□□ -1.14
HLA-DOB-208ENST00000475235 GNRH2O43555 120 aa7.93□□□□□ -1.14
HLA-DOB-208ENST00000475235 IGLV2-11P01706 119 aa7.93□□□□□ -1.14
HLA-DOB-208ENST00000475235 ZFP2Q6ZN57 461 aa7.93□□□□□ -1.14
HLA-DOB-208ENST00000475235 PRNTQ86SH4 94 aa7.93□□□□□ -1.14
HLA-DOB-208ENST00000475235 C8orf49Q96NF6 230 aa7.93□□□□□ -1.14
HLA-DOB-208ENST00000475235 TRBV7-3A0A075B6L6 115 aa7.93□□□□□ -1.14
HLA-DOB-208ENST00000475235 UBE2D1P51668 147 aa7.93□□□□□ -1.14
HLA-DOB-208ENST00000475235 LAGE3Q14657 143 aa7.93□□□□□ -1.14
HLA-DOB-208ENST00000475235 COX8CQ7Z4L0 72 aa7.93□□□□□ -1.14
HLA-DOB-208ENST00000475235 TRBV27A0A0K0K1C4 114 aa7.92□□□□□ -1.14
HLA-DOB-208ENST00000475235 PEX7O00628 323 aa7.92□□□□□ -1.14
HLA-DOB-208ENST00000475235 ZNF80P51504 273 aaPredicted RBP7.92□□□□□ -1.14
HLA-DOB-208ENST00000475235 TRBV10-2A0A0K0K1G8 114 aa7.91□□□□□ -1.14
HLA-DOB-208ENST00000475235 A0A1B0GXF2 115 aa7.91□□□□□ -1.14
HLA-DOB-208ENST00000475235 UBE2L6O14933 153 aa7.9□□□□□ -1.14
HLA-DOB-208ENST00000475235 NDUFC1O43677 76 aa7.9□□□□□ -1.14
HLA-DOB-208ENST00000475235 NTN5Q8WTR8 489 aaPredicted RBP7.9□□□□□ -1.14
HLA-DOB-208ENST00000475235 K7EQD1 137 aa7.89□□□□□ -1.15
HLA-DOB-208ENST00000475235 HBBP68871 147 aa7.89□□□□□ -1.15
HLA-DOB-208ENST00000475235 ZNF876PQ49A33 203 aa7.89□□□□□ -1.15
HLA-DOB-208ENST00000475235 CENPWQ5EE01 88 aa7.89□□□□□ -1.15
HLA-DOB-208ENST00000475235 LYPD5Q6UWN5 251 aa7.89□□□□□ -1.15
HLA-DOB-208ENST00000475235 LINC00173Q6ZV60 143 aa7.89□□□□□ -1.15
HLA-DOB-208ENST00000475235 Q86TA4 180 aa7.89□□□□□ -1.15
HLA-DOB-208ENST00000475235 TMEM243Q9BU79 118 aa7.89□□□□□ -1.15
HLA-DOB-208ENST00000475235 C11orf21Q9P2W6 132 aa7.89□□□□□ -1.15
HLA-DOB-208ENST00000475235 DNAH11Q96DT5 4516 aa7.89□□□□□ -1.15
HLA-DOB-208ENST00000475235 HERC2O95714 4834 aa7.89□□□□□ -1.15
HLA-DOB-208ENST00000475235 TRBV20OR9-2A0A075B6H5 130 aa7.88□□□□□ -1.15
HLA-DOB-208ENST00000475235 NXPH4O95158 308 aa7.88□□□□□ -1.15
HLA-DOB-208ENST00000475235 GYPEP15421 78 aa7.88□□□□□ -1.15
HLA-DOB-208ENST00000475235 NACAE9PAV3 2078 aa7.88□□□□□ -1.15
HLA-DOB-208ENST00000475235 DYNC1H1Q14204 4646 aaKnown RBP7.88□□□□□ -1.15
HLA-DOB-208ENST00000475235 LOC107984156A0A0G2JMH3 177 aa7.88□□□□□ -1.15
HLA-DOB-208ENST00000475235 H3BVH4 76 aa7.88□□□□□ -1.15
HLA-DOB-208ENST00000475235 S100A4P26447 101 aaKnown RBP7.88□□□□□ -1.15
HLA-DOB-208ENST00000475235 ATXN8Q156A1 80 aa7.88□□□□□ -1.15
HLA-DOB-208ENST00000475235 ARL17AQ8IVW1 177 aa7.88□□□□□ -1.15
HLA-DOB-208ENST00000475235 HIST1H4GQ99525 98 aa7.88□□□□□ -1.15
HLA-DOB-208ENST00000475235 KRTAP1-5Q9BYS1 174 aa7.88□□□□□ -1.15
HLA-DOB-208ENST00000475235 PKD1P98161 4303 aa7.87□□□□□ -1.15
HLA-DOB-208ENST00000475235 IGKV3D-20A0A0C4DH25 116 aa7.87□□□□□ -1.15
HLA-DOB-208ENST00000475235 TRBV6-1A0A0K0K1D8 114 aa7.87□□□□□ -1.15
HLA-DOB-208ENST00000475235 EIF4EBP3O60516 100 aaPredicted RBP7.87□□□□□ -1.15
HLA-DOB-208ENST00000475235 MED14OSP0DP75 135 aa7.87□□□□□ -1.15
HLA-DOB-208ENST00000475235 RNASE3P12724 160 aaKnown RBP7.87□□□□□ -1.15
HLA-DOB-208ENST00000475235 PIK3CD-AS1Q5SR53 167 aa7.87□□□□□ -1.15
HLA-DOB-208ENST00000475235 KIAA1109Q2LD37 5005 aa7.86□□□□□ -1.15
HLA-DOB-208ENST00000475235 A0A0B4J2C4 111 aa7.86□□□□□ -1.15
HLA-DOB-208ENST00000475235 TRBV6-4A0A1B0GX49 114 aa7.86□□□□□ -1.15
HLA-DOB-208ENST00000475235 RHOHQ15669 191 aa7.86□□□□□ -1.15
HLA-DOB-208ENST00000475235 PHF5AQ7RTV0 110 aaKnown RBP7.86□□□□□ -1.15
HLA-DOB-208ENST00000475235 TIMM17BO60830 172 aa7.85□□□□□ -1.15
HLA-DOB-208ENST00000475235 LTAP01374 205 aa7.85□□□□□ -1.15
HLA-DOB-208ENST00000475235 IBA57-AS1B1ANH7 110 aa7.84□□□□□ -1.15
HLA-DOB-208ENST00000475235 SH2D1AO60880 128 aa7.84□□□□□ -1.15
HLA-DOB-208ENST00000475235 LINC00315P59091 139 aa7.84□□□□□ -1.15
HLA-DOB-208ENST00000475235 SLC25A29Q8N8R3 303 aa7.84□□□□□ -1.15
HLA-DOB-208ENST00000475235 PKHD1P08F94 4074 aa7.84□□□□□ -1.15
HLA-DOB-208ENST00000475235 LINC01549A6NIU2 74 aa7.83□□□□□ -1.16
HLA-DOB-208ENST00000475235 M0R378 163 aa7.83□□□□□ -1.16
HLA-DOB-208ENST00000475235 CRIP1P50238 77 aa7.83□□□□□ -1.16
HLA-DOB-208ENST00000475235 CYSTM1Q9H1C7 97 aa7.83□□□□□ -1.16
HLA-DOB-208ENST00000475235 MUC4Q99102 2169 aa7.83□□□□□ -1.16
HLA-DOB-208ENST00000475235 LOC100131303A0A0U1RQF7 123 aa7.83□□□□□ -1.16
HLA-DOB-208ENST00000475235 CCKP06307 115 aa7.83□□□□□ -1.16
HLA-DOB-208ENST00000475235 Q8N8P6 123 aa7.83□□□□□ -1.16
HLA-DOB-208ENST00000475235 PGLYRP4Q96LB8 373 aa7.83□□□□□ -1.16
HLA-DOB-208ENST00000475235 TMSB15BA0A087X1C1 80 aa7.82□□□□□ -1.16
HLA-DOB-208ENST00000475235 IGHV3-73A0A0B4J1V6 119 aa7.82□□□□□ -1.16
HLA-DOB-208ENST00000475235 C16orf90A8MZG2 172 aa7.82□□□□□ -1.16
HLA-DOB-208ENST00000475235 ARMS2P0C7Q2 107 aa7.82□□□□□ -1.16
HLA-DOB-208ENST00000475235 DNAH10OSP0CZ25 163 aa7.82□□□□□ -1.16
HLA-DOB-208ENST00000475235 ZNF575Q86XF7 245 aa7.82□□□□□ -1.16
HLA-DOB-208ENST00000475235 WFDC10BQ8IUB3 73 aa7.82□□□□□ -1.16
HLA-DOB-208ENST00000475235 SCO2A0A1W2PP80 73 aa7.81□□□□□ -1.16
HLA-DOB-208ENST00000475235 TWIST1Q15672 202 aa7.81□□□□□ -1.16
HLA-DOB-208ENST00000475235 Q6ZVQ6 151 aa7.81□□□□□ -1.16
HLA-DOB-208ENST00000475235 LCA10Q71F78 164 aa7.81□□□□□ -1.16
HLA-DOB-208ENST00000475235 GFRA4Q9GZZ7 299 aa7.81□□□□□ -1.16
HLA-DOB-208ENST00000475235 PHLDA3Q9Y5J5 127 aa7.81□□□□□ -1.16
HLA-DOB-208ENST00000475235 Q6ZRN7 208 aaPredicted RBP7.8□□□□□ -1.16
HLA-DOB-208ENST00000475235 DAND5Q8N907 189 aa7.8□□□□□ -1.16
HLA-DOB-208ENST00000475235 IGHV3-38A0A0C4DH36 116 aa7.79□□□□□ -1.16
HLA-DOB-208ENST00000475235 ZNF73O43830 326 aaPredicted RBP7.79□□□□□ -1.16
HLA-DOB-208ENST00000475235 IFI27P40305 119 aaPredicted RBP7.79□□□□□ -1.16
HLA-DOB-208ENST00000475235 CACNG7P62955 275 aa7.79□□□□□ -1.16
HLA-DOB-208ENST00000475235 LELP1Q5T871 98 aa7.79□□□□□ -1.16
HLA-DOB-208ENST00000475235 TOMM6Q96B49 74 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms