RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 ETDCA0A1B0GVM5 59 aa7.01□□□□□ -1.29
CDH23-211ENST00000475158 SOSTDC1Q6X4U4 206 aa7.01□□□□□ -1.29
CDH23-211ENST00000475158 POM121L12Q8N7R1 296 aa7.01□□□□□ -1.29
CDH23-211ENST00000475158 TRBV6-5A0A0K0K1A5 114 aa7.01□□□□□ -1.29
CDH23-211ENST00000475158 NHLRC4P0CG21 123 aaPredicted RBP7□□□□□ -1.29
CDH23-211ENST00000475158 FHL3Q13643 280 aa7□□□□□ -1.29
CDH23-211ENST00000475158 IGIPA6NJ69 53 aa6.99□□□□□ -1.29
CDH23-211ENST00000475158 NBEAL1Q6ZS30 2694 aa6.99□□□□□ -1.29
CDH23-211ENST00000475158 COL4A2P08572 1712 aa6.99□□□□□ -1.29
CDH23-211ENST00000475158 A0A096LNI7 61 aa6.99□□□□□ -1.29
CDH23-211ENST00000475158 TSPEAR-AS2P59090 65 aa6.99□□□□□ -1.29
CDH23-211ENST00000475158 SCXQ7RTU7 201 aa6.99□□□□□ -1.29
CDH23-211ENST00000475158 C11orf45Q8TAV5 145 aa6.99□□□□□ -1.29
CDH23-211ENST00000475158 RMI2Q96E14 147 aa6.99□□□□□ -1.29
CDH23-211ENST00000475158 UBE2D4Q9Y2X8 147 aa6.99□□□□□ -1.29
CDH23-211ENST00000475158 STAB1Q9NY15 2570 aa6.98□□□□□ -1.29
CDH23-211ENST00000475158 CDK2AP2O75956 126 aa6.98□□□□□ -1.29
CDH23-211ENST00000475158 COL12A1Q99715 3063 aa6.98□□□□□ -1.29
CDH23-211ENST00000475158 SMIM26A0A096LP01 95 aa6.98□□□□□ -1.29
CDH23-211ENST00000475158 NOTCH1P46531 2555 aa6.98□□□□□ -1.29
CDH23-211ENST00000475158 Q6ZSN1 163 aa6.97□□□□□ -1.29
CDH23-211ENST00000475158 PRO0628Q9UI54 55 aa6.97□□□□□ -1.29
CDH23-211ENST00000475158 ASPMQ8IZT6 3477 aa6.97□□□□□ -1.29
CDH23-211ENST00000475158 DEFB131BA0A096LNP1 70 aa6.97□□□□□ -1.29
CDH23-211ENST00000475158 LRCOL1A6NCL2 159 aa6.97□□□□□ -1.29
CDH23-211ENST00000475158 TRBV6-4A0A1B0GX49 114 aa6.97□□□□□ -1.29
CDH23-211ENST00000475158 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.97□□□□□ -1.29
CDH23-211ENST00000475158 JMJD7-PLA2G4BH0Y9G9 81 aa6.96□□□□□ -1.29
CDH23-211ENST00000475158 HILS1P60008 231 aa6.96□□□□□ -1.29
CDH23-211ENST00000475158 C1orf158Q8N1D5 194 aa6.96□□□□□ -1.3
CDH23-211ENST00000475158 CXCL5P42830 114 aa6.96□□□□□ -1.3
CDH23-211ENST00000475158 C6orf99Q4VX62 202 aa6.96□□□□□ -1.3
CDH23-211ENST00000475158 Q9UF83 564 aa6.96□□□□□ -1.3
CDH23-211ENST00000475158 DIRC1Q969H9 104 aa6.95□□□□□ -1.3
CDH23-211ENST00000475158 PYGO1Q9Y3Y4 419 aa6.95□□□□□ -1.3
CDH23-211ENST00000475158 UBR5O95071 2799 aaPredicted RBP6.95□□□□□ -1.3
CDH23-211ENST00000475158 DCHS1Q96JQ0 3298 aa6.95□□□□□ -1.3
CDH23-211ENST00000475158 LINC00242Q5T6M2 205 aa6.95□□□□□ -1.3
CDH23-211ENST00000475158 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.95□□□□□ -1.3
CDH23-211ENST00000475158 IGLV4-69A0A075B6H9 119 aa6.94□□□□□ -1.3
CDH23-211ENST00000475158 HIGD2AQ9BW72 106 aa6.94□□□□□ -1.3
CDH23-211ENST00000475158 FLNCQ14315 2725 aa6.94□□□□□ -1.3
CDH23-211ENST00000475158 IGLV4-60A0A075B6I1 120 aa6.94□□□□□ -1.3
CDH23-211ENST00000475158 IGLV2-18A0A075B6J9 118 aa6.94□□□□□ -1.3
CDH23-211ENST00000475158 COX6A2Q02221 97 aa6.94□□□□□ -1.3
CDH23-211ENST00000475158 C9orf116Q5BN46 136 aaPredicted RBP6.94□□□□□ -1.3
CDH23-211ENST00000475158 LYRM9A8MSI8 78 aa6.93□□□□□ -1.3
CDH23-211ENST00000475158 LINC00959A0A1B0GUT2 108 aa6.93□□□□□ -1.3
CDH23-211ENST00000475158 FUSP35637 526 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDH23-211ENST00000475158 CDC42SE2Q9NRR3 84 aa6.93□□□□□ -1.3
CDH23-211ENST00000475158 DMDP11532 3685 aa6.93□□□□□ -1.3
CDH23-211ENST00000475158 TRBV7-7A0A0K0K1E9 115 aa6.93□□□□□ -1.3
CDH23-211ENST00000475158 PRR3P79522 188 aaKnown RBP6.93□□□□□ -1.3
CDH23-211ENST00000475158 PRR4Q16378 134 aa6.93□□□□□ -1.3
CDH23-211ENST00000475158 GCN1Q92616 2671 aaKnown RBP6.93□□□□□ -1.3
CDH23-211ENST00000475158 IGKV2-28A0A075B6P5 120 aa6.92□□□□□ -1.3
CDH23-211ENST00000475158 IGKV2D-28P01615 120 aa6.92□□□□□ -1.3
CDH23-211ENST00000475158 NREPQ16612 68 aa6.92□□□□□ -1.3
CDH23-211ENST00000475158 ADAMTSL4-AS1Q5T5F5 129 aa6.92□□□□□ -1.3
CDH23-211ENST00000475158 SERP1Q9Y6X1 66 aa6.92□□□□□ -1.3
CDH23-211ENST00000475158 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
CDH23-211ENST00000475158 KPRPQ5T749 579 aaPredicted RBP6.92□□□□□ -1.3
CDH23-211ENST00000475158 COL6A5A8TX70 2615 aa6.92□□□□□ -1.3
CDH23-211ENST00000475158 IGHV4-30-4P0DP06 118 aa6.91□□□□□ -1.3
CDH23-211ENST00000475158 IBA57-AS1B1ANH7 110 aa6.91□□□□□ -1.3
CDH23-211ENST00000475158 BRI3O95415 125 aa6.91□□□□□ -1.3
CDH23-211ENST00000475158 COX8CQ7Z4L0 72 aa6.91□□□□□ -1.3
CDH23-211ENST00000475158 TMEM256-PLSCR3K7ERE1 68 aa6.91□□□□□ -1.3
CDH23-211ENST00000475158 COL27A1Q8IZC6 1860 aaPredicted RBP6.9□□□□□ -1.3
CDH23-211ENST00000475158 RPS28P62857 69 aaKnown RBP6.9□□□□□ -1.3
CDH23-211ENST00000475158 CHCHD7Q9BUK0 85 aa6.9□□□□□ -1.3
CDH23-211ENST00000475158 NBEAL2Q6ZNJ1 2754 aa6.9□□□□□ -1.3
CDH23-211ENST00000475158 ZFHX4Q86UP3 3567 aa6.9□□□□□ -1.3
CDH23-211ENST00000475158 NDUFS5O43920 106 aa6.9□□□□□ -1.31
CDH23-211ENST00000475158 IGLV1-51P01701 117 aa6.9□□□□□ -1.31
CDH23-211ENST00000475158 MIFP14174 115 aa6.9□□□□□ -1.31
CDH23-211ENST00000475158 COX7BP24311 80 aa6.9□□□□□ -1.31
CDH23-211ENST00000475158 PMAIP1Q13794 54 aa6.9□□□□□ -1.31
CDH23-211ENST00000475158 CRYGAP11844 174 aa6.9□□□□□ -1.31
CDH23-211ENST00000475158 LOC400499M0QZD8 3231 aa6.89□□□□□ -1.31
CDH23-211ENST00000475158 SMIM1B2RUZ4 78 aa6.89□□□□□ -1.31
CDH23-211ENST00000475158 NANOS2P60321 138 aaKnown RBP6.89□□□□□ -1.31
CDH23-211ENST00000475158 SMIM11BQ8TCY0 68 aa6.89□□□□□ -1.31
CDH23-211ENST00000475158 Q6JHZ5 121 aa6.89□□□□□ -1.31
CDH23-211ENST00000475158 UNQ6190/PRO20217Q6UXQ8 127 aa6.89□□□□□ -1.31
CDH23-211ENST00000475158 Q6ZQY7 126 aa6.89□□□□□ -1.31
CDH23-211ENST00000475158 ASH1LQ9NR48 2969 aaKnown RBP6.89□□□□□ -1.31
CDH23-211ENST00000475158 FAM19A1Q7Z5A9 133 aa6.89□□□□□ -1.31
CDH23-211ENST00000475158 UBE2AP49459 152 aa6.88□□□□□ -1.31
CDH23-211ENST00000475158 KIF25-AS1Q9Y6Z4 181 aa6.88□□□□□ -1.31
CDH23-211ENST00000475158 CD164L2Q6UWJ8 174 aa6.88□□□□□ -1.31
CDH23-211ENST00000475158 LINC00846Q9NV44 126 aa6.87□□□□□ -1.31
CDH23-211ENST00000475158 ITPR1Q14643 2758 aa6.87□□□□□ -1.31
CDH23-211ENST00000475158 ATP5EP2Q5VTU8 51 aa6.87□□□□□ -1.31
CDH23-211ENST00000475158 M0R2N4 97 aa6.86□□□□□ -1.31
CDH23-211ENST00000475158 CYSRT1A8MQ03 144 aa6.86□□□□□ -1.31
CDH23-211ENST00000475158 UNC79Q9P2D8 2635 aa6.86□□□□□ -1.31
CDH23-211ENST00000475158 A0A0J9YWU9 116 aa6.86□□□□□ -1.31
CDH23-211ENST00000475158 SYCNQ0VAF6 134 aa6.86□□□□□ -1.31
CDH23-211ENST00000475158 RPL37AP8A6NKH3 93 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms