RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 FAM19A5Q7Z5A7 132 aaPredicted RBP7.03□□□□□ -1.28
COL4A3-205ENST00000471862 PACRGQ96M98 296 aaPredicted RBP7.03□□□□□ -1.28
COL4A3-205ENST00000471862 ALKBH7Q9BT30 221 aaPredicted RBP7.03□□□□□ -1.28
COL4A3-205ENST00000471862 CDKN2A-AS1Q9UH64 79 aa7.03□□□□□ -1.28
COL4A3-205ENST00000471862 IGLV7-43P04211 117 aa7.02□□□□□ -1.29
COL4A3-205ENST00000471862 COMMD7Q86VX2 200 aa7.02□□□□□ -1.29
COL4A3-205ENST00000471862 TOMM7Q9P0U1 55 aa7.02□□□□□ -1.29
COL4A3-205ENST00000471862 M0QXV9 152 aa7.01□□□□□ -1.29
COL4A3-205ENST00000471862 PRSS2P07478 247 aa7.01□□□□□ -1.29
COL4A3-205ENST00000471862 S100PP25815 95 aa7.01□□□□□ -1.29
COL4A3-205ENST00000471862 COX19Q49B96 90 aa7.01□□□□□ -1.29
COL4A3-205ENST00000471862 CARHSP1Q9Y2V2 147 aaKnown RBP7.01□□□□□ -1.29
COL4A3-205ENST00000471862 IGLV5-45A0A087WSX0 123 aa7□□□□□ -1.29
COL4A3-205ENST00000471862 LINC01549A6NIU2 74 aa7□□□□□ -1.29
COL4A3-205ENST00000471862 C6orf226Q5I0X4 101 aa7□□□□□ -1.29
COL4A3-205ENST00000471862 SCGB3A1Q96QR1 104 aa7□□□□□ -1.29
COL4A3-205ENST00000471862 GEMIN7Q9H840 131 aaKnown RBP7□□□□□ -1.29
COL4A3-205ENST00000471862 TINCRA0A1B0GVN0 87 aa6.99□□□□□ -1.29
COL4A3-205ENST00000471862 SMIM1B2RUZ4 78 aa6.99□□□□□ -1.29
COL4A3-205ENST00000471862 CKS1BP61024 79 aa6.99□□□□□ -1.29
COL4A3-205ENST00000471862 RHEBQ15382 184 aa6.99□□□□□ -1.29
COL4A3-205ENST00000471862 MRPL18Q9H0U6 180 aaKnown RBP6.99□□□□□ -1.29
COL4A3-205ENST00000471862 F8VRH5 84 aa6.98□□□□□ -1.29
COL4A3-205ENST00000471862 H0Y9J4 135 aa6.98□□□□□ -1.29
COL4A3-205ENST00000471862 CXCL5P42830 114 aa6.98□□□□□ -1.29
COL4A3-205ENST00000471862 DIRC1Q969H9 104 aa6.98□□□□□ -1.29
COL4A3-205ENST00000471862 UBE2BP63146 152 aa6.97□□□□□ -1.29
COL4A3-205ENST00000471862 FABP9Q0Z7S8 132 aa6.97□□□□□ -1.29
COL4A3-205ENST00000471862 PDZD11Q5EBL8 140 aa6.97□□□□□ -1.29
COL4A3-205ENST00000471862 LINC00469Q8N7U9 141 aa6.97□□□□□ -1.29
COL4A3-205ENST00000471862 CST9LQ9H4G1 147 aa6.97□□□□□ -1.29
COL4A3-205ENST00000471862 RPS10P5Q9NQ39 176 aa6.97□□□□□ -1.29
COL4A3-205ENST00000471862 A0A096LNJ9 63 aa6.96□□□□□ -1.3
COL4A3-205ENST00000471862 KRTAP1-4P0C5Y4 121 aa6.96□□□□□ -1.3
COL4A3-205ENST00000471862 FA2HQ7L5A8 372 aa6.96□□□□□ -1.3
COL4A3-205ENST00000471862 URB1-AS1Q96HZ7 61 aa6.96□□□□□ -1.3
COL4A3-205ENST00000471862 XAGE1AQ9HD64 81 aa6.96□□□□□ -1.3
COL4A3-205ENST00000471862 PMVKQ15126 192 aa6.95□□□□□ -1.3
COL4A3-205ENST00000471862 COX7B2Q8TF08 81 aa6.95□□□□□ -1.3
COL4A3-205ENST00000471862 SMCO4Q9NRQ5 59 aa6.95□□□□□ -1.3
COL4A3-205ENST00000471862 C22orf24Q9Y442 160 aa6.95□□□□□ -1.3
COL4A3-205ENST00000471862 PRR26Q8N8Z3 221 aa6.94□□□□□ -1.3
COL4A3-205ENST00000471862 C18orf32Q8TCD1 76 aa6.94□□□□□ -1.3
COL4A3-205ENST00000471862 TP73-AS1Q9UF72 201 aa6.94□□□□□ -1.3
COL4A3-205ENST00000471862 SPINK8P0C7L1 97 aa6.93□□□□□ -1.3
COL4A3-205ENST00000471862 NUPR1O60356 82 aa6.92□□□□□ -1.3
COL4A3-205ENST00000471862 IGLC3P0DOY3 106 aa6.92□□□□□ -1.3
COL4A3-205ENST00000471862 LBHQ53QV2 105 aaPredicted RBP6.92□□□□□ -1.3
COL4A3-205ENST00000471862 TRAPPC1Q9Y5R8 145 aa6.92□□□□□ -1.3
COL4A3-205ENST00000471862 IGLV1-50A0A075B6I6 118 aa6.91□□□□□ -1.3
COL4A3-205ENST00000471862 IGLV5-39A0A0G2JS06 123 aa6.91□□□□□ -1.3
COL4A3-205ENST00000471862 ZNF861PO60384 105 aa6.91□□□□□ -1.3
COL4A3-205ENST00000471862 LINC00614P0C842 121 aa6.91□□□□□ -1.3
COL4A3-205ENST00000471862 MRPL55Q7Z7F7 128 aaKnown RBP6.91□□□□□ -1.3
COL4A3-205ENST00000471862 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
COL4A3-205ENST00000471862 IGLV5-37A0A075B6J1 123 aa6.9□□□□□ -1.3
COL4A3-205ENST00000471862 H3BRM9 83 aa6.9□□□□□ -1.3
COL4A3-205ENST00000471862 HBDP02042 147 aa6.9□□□□□ -1.3
COL4A3-205ENST00000471862 APOC3P02656 99 aa6.9□□□□□ -1.3
COL4A3-205ENST00000471862 ZNF22P17026 224 aaPredicted RBP6.9□□□□□ -1.3
COL4A3-205ENST00000471862 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
COL4A3-205ENST00000471862 YPEL4Q96NS1 127 aa6.89□□□□□ -1.31
COL4A3-205ENST00000471862 LPAP08519 4548 aa6.89□□□□□ -1.31
COL4A3-205ENST00000471862 SNAPINO95295 136 aa6.88□□□□□ -1.31
COL4A3-205ENST00000471862 PMCHL1Q16048 86 aa6.88□□□□□ -1.31
COL4A3-205ENST00000471862 SVBPQ8N300 66 aa6.88□□□□□ -1.31
COL4A3-205ENST00000471862 C11orf86A6NJI1 115 aa6.87□□□□□ -1.31
COL4A3-205ENST00000471862 BCE1O60756 84 aa6.87□□□□□ -1.31
COL4A3-205ENST00000471862 ATP5LO75964 103 aa6.87□□□□□ -1.31
COL4A3-205ENST00000471862 RAB5BP61020 215 aa6.87□□□□□ -1.31
COL4A3-205ENST00000471862 RPL13AP40429 203 aaKnown RBP6.86□□□□□ -1.31
COL4A3-205ENST00000471862 NDUFA6P56556 154 aa6.86□□□□□ -1.31
COL4A3-205ENST00000471862 NDUFA5Q16718 116 aa6.86□□□□□ -1.31
COL4A3-205ENST00000471862 RPL37AP8A6NKH3 93 aa6.85□□□□□ -1.31
COL4A3-205ENST00000471862 BAGE3Q86Y29 109 aa6.85□□□□□ -1.31
COL4A3-205ENST00000471862 KRTAP13-1Q8IUC0 172 aa6.85□□□□□ -1.31
COL4A3-205ENST00000471862 GAGE10A6NGK3 116 aa6.84□□□□□ -1.31
COL4A3-205ENST00000471862 VPREB1P12018 145 aa6.84□□□□□ -1.31
COL4A3-205ENST00000471862 PFN2P35080 140 aa6.84□□□□□ -1.31
COL4A3-205ENST00000471862 RPL28P46779 137 aaKnown RBP6.84□□□□□ -1.31
COL4A3-205ENST00000471862 ERG28Q9UKR5 140 aa6.84□□□□□ -1.31
COL4A3-205ENST00000471862 SCO1O75880 301 aa6.83□□□□□ -1.32
COL4A3-205ENST00000471862 COX17Q14061 63 aa6.83□□□□□ -1.32
COL4A3-205ENST00000471862 NKAPP1Q8N9T2 125 aa6.83□□□□□ -1.32
COL4A3-205ENST00000471862 ZNF625Q96I27 306 aaPredicted RBP6.83□□□□□ -1.32
COL4A3-205ENST00000471862 SND1-IT1Q9HBX3 110 aa6.83□□□□□ -1.32
COL4A3-205ENST00000471862 A0A087X002 238 aa6.82□□□□□ -1.32
COL4A3-205ENST00000471862 TRAV12-1A0A0B4J245 112 aa6.82□□□□□ -1.32
COL4A3-205ENST00000471862 TMEM170BQ5T4T1 132 aa6.82□□□□□ -1.32
COL4A3-205ENST00000471862 Q8NDZ9 215 aa6.82□□□□□ -1.32
COL4A3-205ENST00000471862 CHCHD1Q96BP2 118 aaKnown RBP6.82□□□□□ -1.32
COL4A3-205ENST00000471862 CHTOPQ9Y3Y2 248 aaKnown RBP6.82□□□□□ -1.32
COL4A3-205ENST00000471862 SFTA2Q6UW10 78 aa6.81□□□□□ -1.32
COL4A3-205ENST00000471862 IFI27L1Q96BM0 104 aa6.81□□□□□ -1.32
COL4A3-205ENST00000471862 IGKV2-28A0A075B6P5 120 aa6.8□□□□□ -1.32
COL4A3-205ENST00000471862 TMEM223A0PJW6 202 aa6.8□□□□□ -1.32
COL4A3-205ENST00000471862 IGKV2D-28P01615 120 aa6.8□□□□□ -1.32
COL4A3-205ENST00000471862 CBLN2Q8IUK8 224 aa6.79□□□□□ -1.32
COL4A3-205ENST00000471862 CRYGAP11844 174 aa6.78□□□□□ -1.32
COL4A3-205ENST00000471862 UBE2AP49459 152 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms