RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 C1orf137Q5JT78 98 aa9.23□□□□□ -0.93
HOXB3-206ENST00000471459 PSORS1C2Q9UIG4 136 aa9.23□□□□□ -0.93
HOXB3-206ENST00000471459 MT1HL1P0DM35 61 aa9.22□□□□□ -0.93
HOXB3-206ENST00000471459 FAM19A5Q7Z5A7 132 aaPredicted RBP9.22□□□□□ -0.93
HOXB3-206ENST00000471459 LINC00469Q8N7U9 141 aa9.22□□□□□ -0.93
HOXB3-206ENST00000471459 CDKN2A-AS1Q9UH64 79 aa9.22□□□□□ -0.93
HOXB3-206ENST00000471459 LINC01546A6NGU7 62 aa9.21□□□□□ -0.94
HOXB3-206ENST00000471459 UBE2BP63146 152 aa9.21□□□□□ -0.94
HOXB3-206ENST00000471459 TRAPPC1Q9Y5R8 145 aa9.21□□□□□ -0.94
HOXB3-206ENST00000471459 TINCRA0A1B0GVN0 87 aa9.2□□□□□ -0.94
HOXB3-206ENST00000471459 APOC3P02656 99 aa9.2□□□□□ -0.94
HOXB3-206ENST00000471459 CXCL5P42830 114 aa9.2□□□□□ -0.94
HOXB3-206ENST00000471459 CST9LQ9H4G1 147 aa9.2□□□□□ -0.94
HOXB3-206ENST00000471459 LRP1Q07954 4544 aaKnown RBP9.19□□□□□ -0.94
HOXB3-206ENST00000471459 FAM168BA1KXE4 195 aa9.19□□□□□ -0.94
HOXB3-206ENST00000471459 F8VRH5 84 aa9.19□□□□□ -0.94
HOXB3-206ENST00000471459 SNAPINO95295 136 aa9.19□□□□□ -0.94
HOXB3-206ENST00000471459 PMVKQ15126 192 aa9.19□□□□□ -0.94
HOXB3-206ENST00000471459 PDZD11Q5EBL8 140 aa9.19□□□□□ -0.94
HOXB3-206ENST00000471459 H3BRM9 83 aa9.18□□□□□ -0.94
HOXB3-206ENST00000471459 M0QXV9 152 aa9.18□□□□□ -0.94
HOXB3-206ENST00000471459 SVBPQ8N300 66 aa9.18□□□□□ -0.94
HOXB3-206ENST00000471459 LINC00614P0C842 121 aa9.17□□□□□ -0.94
HOXB3-206ENST00000471459 NDUFA6P56556 154 aa9.17□□□□□ -0.94
HOXB3-206ENST00000471459 RAB5BP61020 215 aa9.17□□□□□ -0.94
HOXB3-206ENST00000471459 DIRC1Q969H9 104 aa9.17□□□□□ -0.94
HOXB3-206ENST00000471459 IGLV7-43P04211 117 aa9.16□□□□□ -0.94
HOXB3-206ENST00000471459 LBHQ53QV2 105 aaPredicted RBP9.16□□□□□ -0.94
HOXB3-206ENST00000471459 COX7B2Q8TF08 81 aa9.16□□□□□ -0.94
HOXB3-206ENST00000471459 SMIM1B2RUZ4 78 aa9.15□□□□□ -0.94
HOXB3-206ENST00000471459 C9orf129Q5T035 196 aaKnown RBP9.15□□□□□ -0.94
HOXB3-206ENST00000471459 IGLV5-45A0A087WSX0 123 aa9.14□□□□□ -0.95
HOXB3-206ENST00000471459 HBDP02042 147 aa9.13□□□□□ -0.95
HOXB3-206ENST00000471459 KRTAP10-8P60410 259 aa9.13□□□□□ -0.95
HOXB3-206ENST00000471459 XAGE1AQ9HD64 81 aa9.13□□□□□ -0.95
HOXB3-206ENST00000471459 ATP5LO75964 103 aa9.12□□□□□ -0.95
HOXB3-206ENST00000471459 SPINK8P0C7L1 97 aa9.12□□□□□ -0.95
HOXB3-206ENST00000471459 C18orf32Q8TCD1 76 aa9.12□□□□□ -0.95
HOXB3-206ENST00000471459 C22orf24Q9Y442 160 aa9.11□□□□□ -0.95
HOXB3-206ENST00000471459 FAT3Q8TDW7 4589 aa9.1□□□□□ -0.95
HOXB3-206ENST00000471459 KRTAP7-1Q8IUC3 87 aa9.1□□□□□ -0.95
HOXB3-206ENST00000471459 H0Y9J4 135 aa9.09□□□□□ -0.95
HOXB3-206ENST00000471459 IGLC3P0DOY3 106 aa9.09□□□□□ -0.95
HOXB3-206ENST00000471459 ODF1Q14990 250 aa9.09□□□□□ -0.95
HOXB3-206ENST00000471459 TP73-AS1Q9UF72 201 aa9.09□□□□□ -0.95
HOXB3-206ENST00000471459 PKHD1L1Q86WI1 4243 aa9.08□□□□□ -0.96
HOXB3-206ENST00000471459 NUPR1O60356 82 aa9.08□□□□□ -0.96
HOXB3-206ENST00000471459 BAGE3Q86Y29 109 aa9.08□□□□□ -0.96
HOXB3-206ENST00000471459 KRTAP11-1Q8IUC1 163 aa9.08□□□□□ -0.96
HOXB3-206ENST00000471459 PMCHL1Q16048 86 aa9.07□□□□□ -0.96
HOXB3-206ENST00000471459 MRPL55Q7Z7F7 128 aaKnown RBP9.07□□□□□ -0.96
HOXB3-206ENST00000471459 A0A096LNJ9 63 aa9.06□□□□□ -0.96
HOXB3-206ENST00000471459 NKAPP1Q8N9T2 125 aa9.06□□□□□ -0.96
HOXB3-206ENST00000471459 CHCHD1Q96BP2 118 aaKnown RBP9.06□□□□□ -0.96
HOXB3-206ENST00000471459 URB1-AS1Q96HZ7 61 aa9.06□□□□□ -0.96
HOXB3-206ENST00000471459 TMEM170BQ5T4T1 132 aa9.05□□□□□ -0.96
HOXB3-206ENST00000471459 SFTA2Q6UW10 78 aa9.05□□□□□ -0.96
HOXB3-206ENST00000471459 IGLV1-50A0A075B6I6 118 aa9.04□□□□□ -0.96
HOXB3-206ENST00000471459 ZNF861PO60384 105 aa9.04□□□□□ -0.96
HOXB3-206ENST00000471459 ZNF22P17026 224 aaPredicted RBP9.04□□□□□ -0.96
HOXB3-206ENST00000471459 PFN2P35080 140 aa9.04□□□□□ -0.96
HOXB3-206ENST00000471459 IGLV5-39A0A0G2JS06 123 aa9.03□□□□□ -0.96
HOXB3-206ENST00000471459 RPL28P46779 137 aaKnown RBP9.03□□□□□ -0.96
HOXB3-206ENST00000471459 PRR26Q8N8Z3 221 aa9.03□□□□□ -0.96
HOXB3-206ENST00000471459 CHTOPQ9Y3Y2 248 aaKnown RBP9.03□□□□□ -0.96
HOXB3-206ENST00000471459 COX17Q14061 63 aa9.02□□□□□ -0.97
HOXB3-206ENST00000471459 LINC00167Q96N53 147 aa9.02□□□□□ -0.97
HOXB3-206ENST00000471459 RPL13AP40429 203 aaKnown RBP9.01□□□□□ -0.97
HOXB3-206ENST00000471459 IFI27L1Q96BM0 104 aa9.01□□□□□ -0.97
HOXB3-206ENST00000471459 ERG28Q9UKR5 140 aa9.01□□□□□ -0.97
HOXB3-206ENST00000471459 GAGE10A6NGK3 116 aa9□□□□□ -0.97
HOXB3-206ENST00000471459 C11orf86A6NJI1 115 aa9□□□□□ -0.97
HOXB3-206ENST00000471459 RPL37AP8A6NKH3 93 aa9□□□□□ -0.97
HOXB3-206ENST00000471459 BCE1O60756 84 aa9□□□□□ -0.97
HOXB3-206ENST00000471459 HSBP1O75506 76 aa9□□□□□ -0.97
HOXB3-206ENST00000471459 RPL24P83731 157 aaKnown RBP9□□□□□ -0.97
HOXB3-206ENST00000471459 YPEL4Q96NS1 127 aa9□□□□□ -0.97
HOXB3-206ENST00000471459 IGLV5-37A0A075B6J1 123 aa8.99□□□□□ -0.97
HOXB3-206ENST00000471459 TRAV12-1A0A0B4J245 112 aa8.99□□□□□ -0.97
HOXB3-206ENST00000471459 ZNF625Q96I27 306 aaPredicted RBP8.99□□□□□ -0.97
HOXB3-206ENST00000471459 ATP6V1G1O75348 118 aa8.98□□□□□ -0.97
HOXB3-206ENST00000471459 CBLN2Q8IUK8 224 aa8.98□□□□□ -0.97
HOXB3-206ENST00000471459 HMCN2Q8NDA2 5059 aa8.98□□□□□ -0.97
HOXB3-206ENST00000471459 SND1-IT1Q9HBX3 110 aa8.97□□□□□ -0.97
HOXB3-206ENST00000471459 UBE2AP49459 152 aa8.96□□□□□ -0.98
HOXB3-206ENST00000471459 LINC00158P58513 81 aa8.96□□□□□ -0.98
HOXB3-206ENST00000471459 TRGC2P03986 189 aa8.95□□□□□ -0.98
HOXB3-206ENST00000471459 KRTAP1-4P0C5Y4 121 aa8.95□□□□□ -0.98
HOXB3-206ENST00000471459 IGKV2-28A0A075B6P5 120 aa8.94□□□□□ -0.98
HOXB3-206ENST00000471459 TMEM223A0PJW6 202 aa8.94□□□□□ -0.98
HOXB3-206ENST00000471459 LINC00587B1AMM8 73 aa8.94□□□□□ -0.98
HOXB3-206ENST00000471459 IGKV2D-28P01615 120 aa8.94□□□□□ -0.98
HOXB3-206ENST00000471459 FAM19A2Q8N3H0 131 aa8.94□□□□□ -0.98
HOXB3-206ENST00000471459 H0Y8G0 127 aa8.92□□□□□ -0.98
HOXB3-206ENST00000471459 LEPROTL1O95214 131 aa8.92□□□□□ -0.98
HOXB3-206ENST00000471459 VPREB1P12018 145 aa8.92□□□□□ -0.98
HOXB3-206ENST00000471459 CRYGAP11844 174 aa8.91□□□□□ -0.98
HOXB3-206ENST00000471459 HERV-K104P63124 156 aa8.91□□□□□ -0.98
HOXB3-206ENST00000471459 MEIG1Q5JSS6 88 aa8.91□□□□□ -0.98
HOXB3-206ENST00000471459 HSPB8Q9UJY1 196 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms