RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 SPAG11BQ08648 103 aa7.97□□□□□ -1.13
LINC00880-201ENST00000471357 ADAMTSL4-AS1Q5T5F5 129 aa7.97□□□□□ -1.13
LINC00880-201ENST00000471357 LYSTQ99698 3801 aa7.97□□□□□ -1.13
LINC00880-201ENST00000471357 PTTG1IPP53801 180 aa7.96□□□□□ -1.13
LINC00880-201ENST00000471357 FXYD2P54710 66 aa7.96□□□□□ -1.13
LINC00880-201ENST00000471357 SPANXDQ9BXN6 97 aa7.96□□□□□ -1.13
LINC00880-201ENST00000471357 SPANXCQ9NY87 97 aa7.96□□□□□ -1.13
LINC00880-201ENST00000471357 COL5A1-AS1Q5SY13 56 aa7.96□□□□□ -1.14
LINC00880-201ENST00000471357 C2orf82Q6UX34 121 aa7.96□□□□□ -1.14
LINC00880-201ENST00000471357 Q6ZVH6 145 aa7.96□□□□□ -1.14
LINC00880-201ENST00000471357 KRTAP1-5Q9BYS1 174 aa7.96□□□□□ -1.14
LINC00880-201ENST00000471357 A0A0U1RRA0 63 aa7.95□□□□□ -1.14
LINC00880-201ENST00000471357 A6NDN8 102 aa7.95□□□□□ -1.14
LINC00880-201ENST00000471357 SMIM13P0DJ93 91 aa7.95□□□□□ -1.14
LINC00880-201ENST00000471357 MUSTN1Q8IVN3 82 aa7.95□□□□□ -1.14
LINC00880-201ENST00000471357 COX11Q9Y6N1 276 aa7.95□□□□□ -1.14
LINC00880-201ENST00000471357 TTC32Q5I0X7 151 aa7.94□□□□□ -1.14
LINC00880-201ENST00000471357 C6orf223Q8N319 242 aa7.94□□□□□ -1.14
LINC00880-201ENST00000471357 C15orf56Q8N910 161 aa7.94□□□□□ -1.14
LINC00880-201ENST00000471357 LINC00526Q96FQ7 95 aa7.94□□□□□ -1.14
LINC00880-201ENST00000471357 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
LINC00880-201ENST00000471357 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
LINC00880-201ENST00000471357 VPS13DQ5THJ4 4388 aa7.94□□□□□ -1.14
LINC00880-201ENST00000471357 ZNF561-AS1K7EIQ3 104 aa7.93□□□□□ -1.14
LINC00880-201ENST00000471357 DAND5Q8N907 189 aa7.93□□□□□ -1.14
LINC00880-201ENST00000471357 NBDYA0A0U1RRE5 68 aa7.93□□□□□ -1.14
LINC00880-201ENST00000471357 TMEM238LA0A1B0GVL6 79 aa7.93□□□□□ -1.14
LINC00880-201ENST00000471357 A6NJY4 79 aa7.93□□□□□ -1.14
LINC00880-201ENST00000471357 IFITM1P13164 125 aa7.93□□□□□ -1.14
LINC00880-201ENST00000471357 LINC00158P58513 81 aa7.93□□□□□ -1.14
LINC00880-201ENST00000471357 HIGD2BQ4VC39 106 aa7.93□□□□□ -1.14
LINC00880-201ENST00000471357 NTN5Q8WTR8 489 aaPredicted RBP7.93□□□□□ -1.14
LINC00880-201ENST00000471357 ERG28Q9UKR5 140 aa7.93□□□□□ -1.14
LINC00880-201ENST00000471357 RPL24P83731 157 aaKnown RBP7.92□□□□□ -1.14
LINC00880-201ENST00000471357 UNQ6190/PRO20217Q6UXQ8 127 aa7.92□□□□□ -1.14
LINC00880-201ENST00000471357 NHP2Q9NX24 153 aaKnown RBP7.92□□□□□ -1.14
LINC00880-201ENST00000471357 TGP01266 2768 aa7.91□□□□□ -1.14
LINC00880-201ENST00000471357 PFN2P35080 140 aa7.91□□□□□ -1.14
LINC00880-201ENST00000471357 NPC2P61916 151 aa7.91□□□□□ -1.14
LINC00880-201ENST00000471357 CASC10Q5T4H9 136 aa7.91□□□□□ -1.14
LINC00880-201ENST00000471357 TENM2Q9NT68 2774 aa7.91□□□□□ -1.14
LINC00880-201ENST00000471357 GVQW2A0A096LPI5 108 aaPredicted RBP7.91□□□□□ -1.14
LINC00880-201ENST00000471357 C10orf25Q5T742 122 aa7.91□□□□□ -1.14
LINC00880-201ENST00000471357 MIR7-3HGQ8N6C7 128 aa7.91□□□□□ -1.14
LINC00880-201ENST00000471357 LINC00308Q8TCZ7 52 aa7.91□□□□□ -1.14
LINC00880-201ENST00000471357 A4D1N5 150 aa7.9□□□□□ -1.14
LINC00880-201ENST00000471357 COPS9Q8WXC6 57 aa7.9□□□□□ -1.14
LINC00880-201ENST00000471357 C2orf48Q96LS8 159 aa7.9□□□□□ -1.14
LINC00880-201ENST00000471357 CAMK2N2Q96S95 79 aa7.9□□□□□ -1.14
LINC00880-201ENST00000471357 USP17L23D6RBM5 183 aa7.9□□□□□ -1.15
LINC00880-201ENST00000471357 C3orf84H3BNL1 204 aa7.9□□□□□ -1.15
LINC00880-201ENST00000471357 COX17Q14061 63 aa7.9□□□□□ -1.15
LINC00880-201ENST00000471357 A0A1B0GWB2 263 aa7.89□□□□□ -1.15
LINC00880-201ENST00000471357 F8WDY8 70 aa7.89□□□□□ -1.15
LINC00880-201ENST00000471357 EIF4EBP3O60516 100 aaPredicted RBP7.89□□□□□ -1.15
LINC00880-201ENST00000471357 K7ERJ3 54 aa7.88□□□□□ -1.15
LINC00880-201ENST00000471357 TAX1BP3O14907 124 aa7.88□□□□□ -1.15
LINC00880-201ENST00000471357 PSCAO43653 123 aa7.88□□□□□ -1.15
LINC00880-201ENST00000471357 C9orf116Q5BN46 136 aaPredicted RBP7.88□□□□□ -1.15
LINC00880-201ENST00000471357 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.88□□□□□ -1.15
LINC00880-201ENST00000471357 SOSTDC1Q6X4U4 206 aa7.88□□□□□ -1.15
LINC00880-201ENST00000471357 PPDPFQ9H3Y8 114 aa7.88□□□□□ -1.15
LINC00880-201ENST00000471357 C6orf48Q9UBA6 75 aa7.88□□□□□ -1.15
LINC00880-201ENST00000471357 TRBV30A0A0K0K1B3 111 aa7.87□□□□□ -1.15
LINC00880-201ENST00000471357 CFC1BP0CG36 223 aa7.87□□□□□ -1.15
LINC00880-201ENST00000471357 CFC1P0CG37 223 aa7.87□□□□□ -1.15
LINC00880-201ENST00000471357 Q6ZRU5 148 aa7.87□□□□□ -1.15
LINC00880-201ENST00000471357 RAB37Q96AX2 223 aa7.87□□□□□ -1.15
LINC00880-201ENST00000471357 M0R2N4 97 aa7.86□□□□□ -1.15
LINC00880-201ENST00000471357 LECT2O14960 151 aa7.86□□□□□ -1.15
LINC00880-201ENST00000471357 LY6G6CO95867 125 aa7.86□□□□□ -1.15
LINC00880-201ENST00000471357 SYCNQ0VAF6 134 aa7.86□□□□□ -1.15
LINC00880-201ENST00000471357 A0A1B0GV90 55 aa7.85□□□□□ -1.15
LINC00880-201ENST00000471357 A0A0B4J2C4 111 aa7.85□□□□□ -1.15
LINC00880-201ENST00000471357 DNAH10Q8IVF4 4471 aa7.84□□□□□ -1.15
LINC00880-201ENST00000471357 LINC00476Q8WZB0 136 aa7.84□□□□□ -1.15
LINC00880-201ENST00000471357 LOC107984156A0A0G2JMH3 177 aa7.83□□□□□ -1.16
LINC00880-201ENST00000471357 C9orf118A6NHY6 69 aa7.83□□□□□ -1.16
LINC00880-201ENST00000471357 WFDC2Q14508 124 aa7.83□□□□□ -1.16
LINC00880-201ENST00000471357 Q6ZR54 194 aa7.83□□□□□ -1.16
LINC00880-201ENST00000471357 ARL17AQ8IVW1 177 aa7.83□□□□□ -1.16
LINC00880-201ENST00000471357 SND1-IT1Q9HBX3 110 aa7.83□□□□□ -1.16
LINC00880-201ENST00000471357 PRO1854Q9UHT4 67 aa7.83□□□□□ -1.16
LINC00880-201ENST00000471357 SLPIP03973 132 aa7.83□□□□□ -1.16
LINC00880-201ENST00000471357 Q6ZRN7 208 aaPredicted RBP7.83□□□□□ -1.16
LINC00880-201ENST00000471357 CARD19Q96LW7 228 aa7.83□□□□□ -1.16
LINC00880-201ENST00000471357 RNF151Q2KHN1 245 aa7.82□□□□□ -1.16
LINC00880-201ENST00000471357 ALMS1Q8TCU4 4167 aa7.81□□□□□ -1.16
LINC00880-201ENST00000471357 H3BUT2 72 aa7.81□□□□□ -1.16
LINC00880-201ENST00000471357 C14orf177Q52M58 125 aa7.81□□□□□ -1.16
LINC00880-201ENST00000471357 NAA38Q9BRA0 125 aaKnown RBP7.81□□□□□ -1.16
LINC00880-201ENST00000471357 PGPEP1Q9NXJ5 209 aa7.81□□□□□ -1.16
LINC00880-201ENST00000471357 KMT2AQ03164 3969 aa7.81□□□□□ -1.16
LINC00880-201ENST00000471357 NDUFC2-KCTD14E9PQ53 114 aa7.81□□□□□ -1.16
LINC00880-201ENST00000471357 DNAH6Q9C0G6 4158 aa7.8□□□□□ -1.16
LINC00880-201ENST00000471357 LRCOL1A6NCL2 159 aa7.8□□□□□ -1.16
LINC00880-201ENST00000471357 TSPAN13O95857 204 aa7.79□□□□□ -1.16
LINC00880-201ENST00000471357 IGKV2-28A0A075B6P5 120 aa7.78□□□□□ -1.16
LINC00880-201ENST00000471357 NDUFC2O95298 119 aa7.78□□□□□ -1.16
LINC00880-201ENST00000471357 IGKV2D-28P01615 120 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms