RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 UBE2D1P51668 147 aa8.44□□□□□ -1.06
SEMA3F-208ENST00000470737 LINC00242Q5T6M2 205 aa8.44□□□□□ -1.06
SEMA3F-208ENST00000470737 LINC00173Q6ZV60 143 aa8.44□□□□□ -1.06
SEMA3F-208ENST00000470737 FA2HQ7L5A8 372 aa8.44□□□□□ -1.06
SEMA3F-208ENST00000470737 ORAOV1Q8WV07 137 aa8.44□□□□□ -1.06
SEMA3F-208ENST00000470737 MRPL35Q9NZE8 188 aaKnown RBP8.44□□□□□ -1.06
SEMA3F-208ENST00000470737 H0Y9J4 135 aa8.43□□□□□ -1.06
SEMA3F-208ENST00000470737 RAB5BP61020 215 aa8.43□□□□□ -1.06
SEMA3F-208ENST00000470737 SEC11AP67812 179 aa8.43□□□□□ -1.06
SEMA3F-208ENST00000470737 IGLV1-50A0A075B6I6 118 aa8.42□□□□□ -1.06
SEMA3F-208ENST00000470737 LINC00614P0C842 121 aa8.42□□□□□ -1.06
SEMA3F-208ENST00000470737 FAM19A5Q7Z5A7 132 aaPredicted RBP8.41□□□□□ -1.06
SEMA3F-208ENST00000470737 CBLN2Q8IUK8 224 aa8.41□□□□□ -1.06
SEMA3F-208ENST00000470737 SCGB3A1Q96QR1 104 aa8.41□□□□□ -1.06
SEMA3F-208ENST00000470737 HERVK_113P63121 156 aa8.4□□□□□ -1.06
SEMA3F-208ENST00000470737 URB1-AS1Q96HZ7 61 aa8.4□□□□□ -1.06
SEMA3F-208ENST00000470737 FAM168BA1KXE4 195 aa8.39□□□□□ -1.07
SEMA3F-208ENST00000470737 TLX1NBP0CAT3 122 aa8.39□□□□□ -1.07
SEMA3F-208ENST00000470737 UBE2BP63146 152 aa8.39□□□□□ -1.07
SEMA3F-208ENST00000470737 GAGE2EQ4V326 116 aa8.39□□□□□ -1.07
SEMA3F-208ENST00000470737 GAGE2DQ9UEU5 116 aa8.39□□□□□ -1.07
SEMA3F-208ENST00000470737 A0A096LNJ9 63 aa8.38□□□□□ -1.07
SEMA3F-208ENST00000470737 RPL13AP40429 203 aaKnown RBP8.38□□□□□ -1.07
SEMA3F-208ENST00000470737 PRR4Q16378 134 aa8.38□□□□□ -1.07
SEMA3F-208ENST00000470737 TINCRA0A1B0GVN0 87 aa8.37□□□□□ -1.07
SEMA3F-208ENST00000470737 M0QXV9 152 aa8.37□□□□□ -1.07
SEMA3F-208ENST00000470737 SCO1O75880 301 aa8.37□□□□□ -1.07
SEMA3F-208ENST00000470737 HBDP02042 147 aa8.37□□□□□ -1.07
SEMA3F-208ENST00000470737 KIAA0087Q14695 138 aa8.37□□□□□ -1.07
SEMA3F-208ENST00000470737 C10orf25Q5T742 122 aa8.37□□□□□ -1.07
SEMA3F-208ENST00000470737 ZC2HC1BQ5TFG8 222 aa8.37□□□□□ -1.07
SEMA3F-208ENST00000470737 UNQ6190/PRO20217Q6UXQ8 127 aa8.37□□□□□ -1.07
SEMA3F-208ENST00000470737 CHCHD1Q96BP2 118 aaKnown RBP8.37□□□□□ -1.07
SEMA3F-208ENST00000470737 C6orf48Q9UBA6 75 aa8.37□□□□□ -1.07
SEMA3F-208ENST00000470737 IGLV5-45A0A087WSX0 123 aa8.36□□□□□ -1.07
SEMA3F-208ENST00000470737 A0A0U1RQV1 116 aa8.36□□□□□ -1.07
SEMA3F-208ENST00000470737 COLCA2A8K830 154 aa8.36□□□□□ -1.07
SEMA3F-208ENST00000470737 PMVKQ15126 192 aa8.36□□□□□ -1.07
SEMA3F-208ENST00000470737 PDZD11Q5EBL8 140 aa8.36□□□□□ -1.07
SEMA3F-208ENST00000470737 CST9LQ9H4G1 147 aa8.36□□□□□ -1.07
SEMA3F-208ENST00000470737 ATP5LO75964 103 aa8.35□□□□□ -1.07
SEMA3F-208ENST00000470737 KRTAP11-1Q8IUC1 163 aa8.35□□□□□ -1.07
SEMA3F-208ENST00000470737 GEMIN7Q9H840 131 aaKnown RBP8.35□□□□□ -1.07
SEMA3F-208ENST00000470737 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
SEMA3F-208ENST00000470737 KRTAP1-4P0C5Y4 121 aa8.34□□□□□ -1.07
SEMA3F-208ENST00000470737 Q8IZM0 81 aa8.34□□□□□ -1.07
SEMA3F-208ENST00000470737 PACRGQ96M98 296 aaPredicted RBP8.34□□□□□ -1.07
SEMA3F-208ENST00000470737 CDKN2A-AS1Q9UH64 79 aa8.34□□□□□ -1.07
SEMA3F-208ENST00000470737 TRGC2P03986 189 aa8.33□□□□□ -1.08
SEMA3F-208ENST00000470737 NDUFC2-KCTD14E9PQ53 114 aa8.31□□□□□ -1.08
SEMA3F-208ENST00000470737 IGLC3P0DOY3 106 aa8.31□□□□□ -1.08
SEMA3F-208ENST00000470737 CXCL5P42830 114 aa8.3□□□□□ -1.08
SEMA3F-208ENST00000470737 LINC00469Q8N7U9 141 aa8.3□□□□□ -1.08
SEMA3F-208ENST00000470737 MUC2Q02817 5179 aa8.29□□□□□ -1.08
SEMA3F-208ENST00000470737 SMIM1B2RUZ4 78 aa8.29□□□□□ -1.08
SEMA3F-208ENST00000470737 PRSS2P07478 247 aa8.29□□□□□ -1.08
SEMA3F-208ENST00000470737 C6orf226Q5I0X4 101 aa8.29□□□□□ -1.08
SEMA3F-208ENST00000470737 C2orf82Q6UX34 121 aa8.29□□□□□ -1.08
SEMA3F-208ENST00000470737 BAGE3Q86Y29 109 aa8.29□□□□□ -1.08
SEMA3F-208ENST00000470737 KRTAP7-1Q8IUC3 87 aa8.29□□□□□ -1.08
SEMA3F-208ENST00000470737 TRAV12-1A0A0B4J245 112 aa8.28□□□□□ -1.08
SEMA3F-208ENST00000470737 H3BRM9 83 aa8.28□□□□□ -1.08
SEMA3F-208ENST00000470737 NUPR1O60356 82 aa8.28□□□□□ -1.08
SEMA3F-208ENST00000470737 ZNF861PO60384 105 aa8.28□□□□□ -1.08
SEMA3F-208ENST00000470737 HSBP1O75506 76 aa8.28□□□□□ -1.08
SEMA3F-208ENST00000470737 PMCHL1Q16048 86 aa8.28□□□□□ -1.08
SEMA3F-208ENST00000470737 C9orf129Q5T035 196 aaKnown RBP8.28□□□□□ -1.08
SEMA3F-208ENST00000470737 CKS1BP61024 79 aa8.27□□□□□ -1.09
SEMA3F-208ENST00000470737 IFI27L1Q96BM0 104 aa8.27□□□□□ -1.09
SEMA3F-208ENST00000470737 IGLV5-39A0A0G2JS06 123 aa8.26□□□□□ -1.09
SEMA3F-208ENST00000470737 F8VRH5 84 aa8.26□□□□□ -1.09
SEMA3F-208ENST00000470737 TSPAN13O95857 204 aa8.26□□□□□ -1.09
SEMA3F-208ENST00000470737 LBHQ53QV2 105 aaPredicted RBP8.26□□□□□ -1.09
SEMA3F-208ENST00000470737 TOMM7Q9P0U1 55 aa8.26□□□□□ -1.09
SEMA3F-208ENST00000470737 LINC00310P59036 64 aa8.25□□□□□ -1.09
SEMA3F-208ENST00000470737 COX7B2Q8TF08 81 aa8.25□□□□□ -1.09
SEMA3F-208ENST00000470737 SERF1AO75920 110 aa8.24□□□□□ -1.09
SEMA3F-208ENST00000470737 ZNF22P17026 224 aaPredicted RBP8.24□□□□□ -1.09
SEMA3F-208ENST00000470737 NDUFA6P56556 154 aa8.24□□□□□ -1.09
SEMA3F-208ENST00000470737 C22orf24Q9Y442 160 aa8.24□□□□□ -1.09
SEMA3F-208ENST00000470737 SFTA2Q6UW10 78 aa8.23□□□□□ -1.09
SEMA3F-208ENST00000470737 FAM19A2Q8N3H0 131 aa8.23□□□□□ -1.09
SEMA3F-208ENST00000470737 CHTOPQ9Y3Y2 248 aaKnown RBP8.23□□□□□ -1.09
SEMA3F-208ENST00000470737 LEPROTL1O95214 131 aa8.22□□□□□ -1.09
SEMA3F-208ENST00000470737 SPINK8P0C7L1 97 aa8.22□□□□□ -1.09
SEMA3F-208ENST00000470737 RPL28P46779 137 aaKnown RBP8.22□□□□□ -1.09
SEMA3F-208ENST00000470737 C11orf86A6NJI1 115 aa8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 HIST1H2BKO60814 126 aa8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 HIST1H2BJP06899 126 aa8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 HIST1H2BOP23527 126 aa8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 HIST1H2BBP33778 126 aa8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 HIST1H2BDP58876 126 aa8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 HIST1H2BCP62807 126 aa8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 HIST2H2BEQ16778 126 aa8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 TYMSOSQ8TAI1 123 aa8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 HIST1H2BHQ93079 126 aa8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 HIST1H2BNQ99877 126 aa8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 HIST1H2BMQ99879 126 aa8.21□□□□□ -1.1
SEMA3F-208ENST00000470737 XAGE1AQ9HD64 81 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms