RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CMC2Q9NRP2 79 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 CDC42SE2Q9NRR3 84 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 ABRACLQ9P1F3 81 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 UBE2D4Q9Y2X8 147 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 PKD1L3Q7Z443 1732 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 C5P01031 1676 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 PLCH1Q4KWH8 1693 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 PAPPAQ13219 1627 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 A0A1B0GWA3 101 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 C10orf142B7Z368 130 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 IFI27P40305 119 aaPredicted RBP1□□□□□ -2.25
BRCA2-202ENST00000470094 FXYD4P59646 89 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 RBM3P98179 157 aaKnown RBP1□□□□□ -2.25
BRCA2-202ENST00000470094 ZNF56Q15929 161 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 RPL7L1Q6DKI1 246 aaKnown RBP1□□□□□ -2.25
BRCA2-202ENST00000470094 LINC00575Q6W349 94 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 ZNF818PQ6ZRF7 136 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 C6orf201Q7Z4U5 140 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 BAGE3Q86Y29 109 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 BAGE2Q86Y30 109 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 FAM223AQ8IWN6 122 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 PPP1R1CQ8WVI7 109 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 TMEM14BQ9NUH8 114 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 PRO1854Q9UHT4 67 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 UBR3Q6ZT12 1888 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 LAMA4Q16363 1823 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 QSER1Q2KHR3 1735 aa1□□□□□ -2.25
BRCA2-202ENST00000470094 SLIT1O75093 1534 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 CPS1P31327 1500 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 SPAG17Q6Q759 2223 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 PAPPA2Q9BXP8 1791 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 NRXN2Q9P2S2 1712 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 TRAV1-2A0A0B4J238 106 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 TRBV30A0A0K0K1B3 111 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 LCE6AA0A183 80 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 FAM223BA6NKX1 122 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 IQCF6A8MYZ5 107 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 NCR3O14931 201 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 COX6CP09669 75 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 IFI6P09912 130 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 ELOF1P60002 83 aaKnown RBP0.99□□□□□ -2.25
BRCA2-202ENST00000470094 SNRPGP62308 76 aaKnown RBP0.99□□□□□ -2.25
BRCA2-202ENST00000470094 ESPL1Q14674 2120 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 FXYD3Q14802 87 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 ATP5EP2Q5VTU8 51 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 NCBP2-AS2Q69YL0 99 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 C10orf99Q6UWK7 81 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 Q8N6K4 173 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 C5orf56Q8N8D9 126 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 AMELXQ99217 191 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 PLAC8Q9NZF1 115 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 COL6A6A6NMZ7 2263 aa0.99□□□□□ -2.25
BRCA2-202ENST00000470094 ZFHX3Q15911 3703 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 IQGAP1P46940 1657 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 TOP2BQ02880 1626 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 NHSL1Q5SYE7 1610 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 LINC01546A6NGU7 62 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 CRYM-AS1A6NIL9 109 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 A6NIN4 97 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 CEBPZOSA8MTT3 80 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 PLGLAQ15195 96 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 Q6ZQY7 126 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 LINC00846Q9NV44 126 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 PSENENQ9NZ42 101 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 ARL2-SNX15V9GYD0 113 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 DNAJC13O75165 2243 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 ABCC8Q09428 1581 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 RICTORQ6R327 1708 aa0.98□□□□□ -2.25
BRCA2-202ENST00000470094 PARP4Q9UKK3 1724 aaKnown RBP0.98□□□□□ -2.25
BRCA2-202ENST00000470094 TRAV12-3A0A0B4J271 114 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 TRBV7-4A0A0J9YYF1 115 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 F8WEM9 126 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 LEPROTL1O95214 131 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 SAA2P0DJI9 122 aaPredicted RBP0.97□□□□□ -2.25
BRCA2-202ENST00000470094 PRB4P10163 310 aaPredicted RBP0.97□□□□□ -2.25
BRCA2-202ENST00000470094 SERF2P84101 59 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 ATXN8Q156A1 80 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 C20orf197Q8N268 126 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 HILPDAQ9Y5L2 63 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 TULP4Q9NRJ4 1543 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 ABCA4P78363 2273 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 LY75O60449 1722 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 SHPRHQ149N8 1683 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 LRRC37A3O60309 1634 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 KIF21BO75037 1637 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 NRXN3Q9Y4C0 1643 aa0.97□□□□□ -2.25
BRCA2-202ENST00000470094 ZNF236Q9UL36 1845 aa0.96□□□□□ -2.26
BRCA2-202ENST00000470094 MROH2BQ7Z745 1585 aa0.96□□□□□ -2.26
BRCA2-202ENST00000470094 SAMD9LQ8IVG5 1584 aa0.96□□□□□ -2.26
BRCA2-202ENST00000470094 BCORQ6W2J9 1755 aa0.96□□□□□ -2.26
BRCA2-202ENST00000470094 DDX60Q8IY21 1712 aaKnown RBP0.96□□□□□ -2.26
BRCA2-202ENST00000470094 SMIM27A0A1W2PRY6 76 aa0.96□□□□□ -2.26
BRCA2-202ENST00000470094 CLPSL1A2RUU4 121 aa0.96□□□□□ -2.26
BRCA2-202ENST00000470094 ARMS2P0C7Q2 107 aa0.96□□□□□ -2.26
BRCA2-202ENST00000470094 CAV3P56539 151 aa0.96□□□□□ -2.26
BRCA2-202ENST00000470094 S100A7L2Q5SY68 101 aa0.96□□□□□ -2.26
BRCA2-202ENST00000470094 CCL19Q99731 98 aa0.96□□□□□ -2.26
BRCA2-202ENST00000470094 FAM103A1Q9BTL3 118 aaKnown RBP0.96□□□□□ -2.26
BRCA2-202ENST00000470094 LINC01558Q9Y6Z2 57 aa0.96□□□□□ -2.26
BRCA2-202ENST00000470094 TNCP24821 2201 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms