RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ZNF861PO60384 105 aa7.95□□□□□ -1.14
CPSF4-210ENST00000469897 RAB14P61106 215 aa7.95□□□□□ -1.14
CPSF4-210ENST00000469897 NDUFA5Q16718 116 aa7.95□□□□□ -1.14
CPSF4-210ENST00000469897 KIAA1644Q3SXP7 199 aa7.95□□□□□ -1.14
CPSF4-210ENST00000469897 HERVK_113P63121 156 aa7.94□□□□□ -1.14
CPSF4-210ENST00000469897 LBHQ53QV2 105 aaPredicted RBP7.94□□□□□ -1.14
CPSF4-210ENST00000469897 PAPPA-AS1Q5QFB9 102 aa7.94□□□□□ -1.14
CPSF4-210ENST00000469897 GEMIN7Q9H840 131 aaKnown RBP7.94□□□□□ -1.14
CPSF4-210ENST00000469897 G0S2P27469 103 aa7.93□□□□□ -1.14
CPSF4-210ENST00000469897 SEC11AP67812 179 aa7.93□□□□□ -1.14
CPSF4-210ENST00000469897 TOMM6Q96B49 74 aa7.93□□□□□ -1.14
CPSF4-210ENST00000469897 F8VRH5 84 aa7.92□□□□□ -1.14
CPSF4-210ENST00000469897 ATP6V1G1O75348 118 aa7.92□□□□□ -1.14
CPSF4-210ENST00000469897 SCGB3A1Q96QR1 104 aa7.92□□□□□ -1.14
CPSF4-210ENST00000469897 TIMM17AQ99595 171 aa7.92□□□□□ -1.14
CPSF4-210ENST00000469897 ADCYAP1P18509 176 aa7.91□□□□□ -1.14
CPSF4-210ENST00000469897 RPL13AP40429 203 aaKnown RBP7.91□□□□□ -1.14
CPSF4-210ENST00000469897 PRR4Q16378 134 aa7.91□□□□□ -1.14
CPSF4-210ENST00000469897 ERASQ7Z444 233 aa7.91□□□□□ -1.14
CPSF4-210ENST00000469897 CARHSP1Q9Y2V2 147 aaKnown RBP7.91□□□□□ -1.14
CPSF4-210ENST00000469897 NUPR1O60356 82 aa7.9□□□□□ -1.14
CPSF4-210ENST00000469897 MRPL55Q7Z7F7 128 aaKnown RBP7.9□□□□□ -1.14
CPSF4-210ENST00000469897 SLC7A5P1Q8MH63 180 aa7.9□□□□□ -1.14
CPSF4-210ENST00000469897 TSPAN13O95857 204 aa7.89□□□□□ -1.15
CPSF4-210ENST00000469897 RAB5BP61020 215 aa7.89□□□□□ -1.15
CPSF4-210ENST00000469897 TINCRA0A1B0GVN0 87 aa7.88□□□□□ -1.15
CPSF4-210ENST00000469897 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
CPSF4-210ENST00000469897 SMIM1B2RUZ4 78 aa7.88□□□□□ -1.15
CPSF4-210ENST00000469897 PDZD11Q5EBL8 140 aa7.88□□□□□ -1.15
CPSF4-210ENST00000469897 COX7B2Q8TF08 81 aa7.88□□□□□ -1.15
CPSF4-210ENST00000469897 LINC00167Q96N53 147 aa7.88□□□□□ -1.15
CPSF4-210ENST00000469897 GAGE10A6NGK3 116 aa7.87□□□□□ -1.15
CPSF4-210ENST00000469897 BCE1O60756 84 aa7.87□□□□□ -1.15
CPSF4-210ENST00000469897 CXCL5P42830 114 aa7.87□□□□□ -1.15
CPSF4-210ENST00000469897 RPL28P46779 137 aaKnown RBP7.87□□□□□ -1.15
CPSF4-210ENST00000469897 CLLU1Q5K131 121 aa7.87□□□□□ -1.15
CPSF4-210ENST00000469897 CST9LQ9H4G1 147 aa7.87□□□□□ -1.15
CPSF4-210ENST00000469897 TP73-AS1Q9UF72 201 aa7.87□□□□□ -1.15
CPSF4-210ENST00000469897 SPINK8P0C7L1 97 aa7.86□□□□□ -1.15
CPSF4-210ENST00000469897 ANAPC11Q9NYG5 84 aa7.86□□□□□ -1.15
CPSF4-210ENST00000469897 IGLV5-45A0A087WSX0 123 aa7.85□□□□□ -1.15
CPSF4-210ENST00000469897 A0A087X002 238 aa7.85□□□□□ -1.15
CPSF4-210ENST00000469897 TMEM218A2RU14 115 aa7.85□□□□□ -1.15
CPSF4-210ENST00000469897 S100A1P23297 94 aa7.85□□□□□ -1.15
CPSF4-210ENST00000469897 TRAV9-1A0A075B6T8 112 aa7.84□□□□□ -1.15
CPSF4-210ENST00000469897 LINC01546A6NGU7 62 aa7.84□□□□□ -1.15
CPSF4-210ENST00000469897 GNB1LQ9BYB4 327 aa7.84□□□□□ -1.15
CPSF4-210ENST00000469897 CRYGAP11844 174 aa7.83□□□□□ -1.16
CPSF4-210ENST00000469897 S100PP25815 95 aa7.83□□□□□ -1.16
CPSF4-210ENST00000469897 PMVKQ15126 192 aa7.83□□□□□ -1.16
CPSF4-210ENST00000469897 TYMSOSQ8TAI1 123 aa7.83□□□□□ -1.16
CPSF4-210ENST00000469897 LINC01549A6NIU2 74 aa7.82□□□□□ -1.16
CPSF4-210ENST00000469897 UQCC3Q6UW78 93 aa7.82□□□□□ -1.16
CPSF4-210ENST00000469897 FA2HQ7L5A8 372 aa7.82□□□□□ -1.16
CPSF4-210ENST00000469897 MRPL18Q9H0U6 180 aaKnown RBP7.82□□□□□ -1.16
CPSF4-210ENST00000469897 SCO1O75880 301 aa7.81□□□□□ -1.16
CPSF4-210ENST00000469897 PFN2P35080 140 aa7.81□□□□□ -1.16
CPSF4-210ENST00000469897 FABP9Q0Z7S8 132 aa7.81□□□□□ -1.16
CPSF4-210ENST00000469897 MUC2Q02817 5179 aa7.8□□□□□ -1.16
CPSF4-210ENST00000469897 IGLV5-37A0A075B6J1 123 aa7.8□□□□□ -1.16
CPSF4-210ENST00000469897 ATP5LO75964 103 aa7.8□□□□□ -1.16
CPSF4-210ENST00000469897 UBE2AP49459 152 aa7.8□□□□□ -1.16
CPSF4-210ENST00000469897 NDUFA6P56556 154 aa7.8□□□□□ -1.16
CPSF4-210ENST00000469897 NKAPP1Q8N9T2 125 aa7.8□□□□□ -1.16
CPSF4-210ENST00000469897 SMCO4Q9NRQ5 59 aa7.8□□□□□ -1.16
CPSF4-210ENST00000469897 IGKV2-28A0A075B6P5 120 aa7.79□□□□□ -1.16
CPSF4-210ENST00000469897 H3BRM9 83 aa7.79□□□□□ -1.16
CPSF4-210ENST00000469897 IGKV2D-28P01615 120 aa7.79□□□□□ -1.16
CPSF4-210ENST00000469897 SEC11CQ9BY50 192 aa7.79□□□□□ -1.16
CPSF4-210ENST00000469897 COX19Q49B96 90 aa7.78□□□□□ -1.16
CPSF4-210ENST00000469897 KRTAP13-2Q52LG2 175 aa7.78□□□□□ -1.16
CPSF4-210ENST00000469897 KRTAP13-1Q8IUC0 172 aa7.78□□□□□ -1.16
CPSF4-210ENST00000469897 A0A096LNJ9 63 aa7.76□□□□□ -1.17
CPSF4-210ENST00000469897 IGLV5-39A0A0G2JS06 123 aa7.76□□□□□ -1.17
CPSF4-210ENST00000469897 IGLC3P0DOY3 106 aa7.76□□□□□ -1.17
CPSF4-210ENST00000469897 URB1-AS1Q96HZ7 61 aa7.76□□□□□ -1.17
CPSF4-210ENST00000469897 ZNF625Q96I27 306 aaPredicted RBP7.76□□□□□ -1.17
CPSF4-210ENST00000469897 SND1-IT1Q9HBX3 110 aa7.76□□□□□ -1.17
CPSF4-210ENST00000469897 RPS10P5Q9NQ39 176 aa7.76□□□□□ -1.17
CPSF4-210ENST00000469897 LINC00614P0C842 121 aa7.75□□□□□ -1.17
CPSF4-210ENST00000469897 ZNF22P17026 224 aaPredicted RBP7.75□□□□□ -1.17
CPSF4-210ENST00000469897 PRLHP81277 87 aa7.75□□□□□ -1.17
CPSF4-210ENST00000469897 COMMD7Q86VX2 200 aa7.75□□□□□ -1.17
CPSF4-210ENST00000469897 ERG28Q9UKR5 140 aa7.75□□□□□ -1.17
CPSF4-210ENST00000469897 TMEM238C9JI98 176 aa7.74□□□□□ -1.17
CPSF4-210ENST00000469897 VPREB1P12018 145 aa7.74□□□□□ -1.17
CPSF4-210ENST00000469897 PMCHL1Q16048 86 aa7.74□□□□□ -1.17
CPSF4-210ENST00000469897 FAM19A1Q7Z5A9 133 aa7.74□□□□□ -1.17
CPSF4-210ENST00000469897 RETNLBQ9BQ08 111 aa7.74□□□□□ -1.17
CPSF4-210ENST00000469897 RPL24P83731 157 aaKnown RBP7.73□□□□□ -1.17
CPSF4-210ENST00000469897 FAM229BQ4G0N7 80 aa7.73□□□□□ -1.17
CPSF4-210ENST00000469897 TMEM126AQ9H061 195 aa7.73□□□□□ -1.17
CPSF4-210ENST00000469897 TRAPPC1Q9Y5R8 145 aa7.73□□□□□ -1.17
CPSF4-210ENST00000469897 IGKV2D-26A0A0A0MRZ7 120 aa7.72□□□□□ -1.17
CPSF4-210ENST00000469897 COX17Q14061 63 aa7.72□□□□□ -1.17
CPSF4-210ENST00000469897 C10orf91Q5T1B1 145 aa7.72□□□□□ -1.17
CPSF4-210ENST00000469897 BAGE3Q86Y29 109 aa7.72□□□□□ -1.17
CPSF4-210ENST00000469897 LINC00304Q8N9R0 145 aa7.72□□□□□ -1.17
CPSF4-210ENST00000469897 Q8NDZ9 215 aa7.72□□□□□ -1.17
CPSF4-210ENST00000469897 C18orf32Q8TCD1 76 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms