RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 NDUFA12Q9UI09 145 aa11.92□□□□□ -0.5
MRPL28-208ENST00000469744 COX6A2Q02221 97 aa11.91□□□□□ -0.5
MRPL28-208ENST00000469744 SPCS1Q9Y6A9 102 aa11.91□□□□□ -0.5
MRPL28-208ENST00000469744 C16orf90A8MZG2 172 aa11.9□□□□□ -0.5
MRPL28-208ENST00000469744 NDUFA1O15239 70 aa11.9□□□□□ -0.5
MRPL28-208ENST00000469744 WFDC10BQ8IUB3 73 aa11.9□□□□□ -0.5
MRPL28-208ENST00000469744 SPANXDQ9BXN6 97 aa11.9□□□□□ -0.5
MRPL28-208ENST00000469744 SPANXCQ9NY87 97 aa11.9□□□□□ -0.5
MRPL28-208ENST00000469744 RPL24P83731 157 aaKnown RBP11.89□□□□□ -0.51
MRPL28-208ENST00000469744 GAGE6Q13070 117 aa11.89□□□□□ -0.51
MRPL28-208ENST00000469744 KRTAP17-1Q9BYP8 105 aa11.89□□□□□ -0.51
MRPL28-208ENST00000469744 NAA38Q9BRA0 125 aaKnown RBP11.89□□□□□ -0.51
MRPL28-208ENST00000469744 CHCHD5Q9BSY4 110 aa11.89□□□□□ -0.51
MRPL28-208ENST00000469744 TRAV13-1A0A0B4J241 112 aa11.88□□□□□ -0.51
MRPL28-208ENST00000469744 A0A1B0GUV1 79 aa11.88□□□□□ -0.51
MRPL28-208ENST00000469744 LITAFQ99732 161 aa11.88□□□□□ -0.51
MRPL28-208ENST00000469744 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.87□□□□□ -0.51
MRPL28-208ENST00000469744 SMIM1B2RUZ4 78 aa11.87□□□□□ -0.51
MRPL28-208ENST00000469744 Q6ZRN7 208 aaPredicted RBP11.87□□□□□ -0.51
MRPL28-208ENST00000469744 A0A0B4J2C4 111 aa11.85□□□□□ -0.51
MRPL28-208ENST00000469744 CFC1BP0CG36 223 aa11.85□□□□□ -0.51
MRPL28-208ENST00000469744 CFC1P0CG37 223 aa11.85□□□□□ -0.51
MRPL28-208ENST00000469744 IFITM1P13164 125 aa11.85□□□□□ -0.51
MRPL28-208ENST00000469744 KRTAP10-2P60368 255 aa11.85□□□□□ -0.51
MRPL28-208ENST00000469744 SH2D6Q7Z4S9 175 aa11.85□□□□□ -0.51
MRPL28-208ENST00000469744 MUSTN1Q8IVN3 82 aa11.85□□□□□ -0.51
MRPL28-208ENST00000469744 MIAQ16674 131 aa11.84□□□□□ -0.51
MRPL28-208ENST00000469744 PGPEP1Q9NXJ5 209 aa11.84□□□□□ -0.51
MRPL28-208ENST00000469744 IGLV4-60A0A075B6I1 120 aa11.83□□□□□ -0.52
MRPL28-208ENST00000469744 A4D1N5 150 aa11.83□□□□□ -0.52
MRPL28-208ENST00000469744 APOMO95445 188 aa11.83□□□□□ -0.52
MRPL28-208ENST00000469744 HERV-K104P63124 156 aa11.83□□□□□ -0.52
MRPL28-208ENST00000469744 CIRBPQ14011 172 aaKnown RBP11.83□□□□□ -0.52
MRPL28-208ENST00000469744 LYRM7Q5U5X0 104 aa11.83□□□□□ -0.52
MRPL28-208ENST00000469744 PRO1854Q9UHT4 67 aa11.83□□□□□ -0.52
MRPL28-208ENST00000469744 PPDPFQ9H3Y8 114 aa11.83□□□□□ -0.52
MRPL28-208ENST00000469744 TSPAN13O95857 204 aa11.82□□□□□ -0.52
MRPL28-208ENST00000469744 DNAH10OSP0CZ25 163 aa11.82□□□□□ -0.52
MRPL28-208ENST00000469744 FUSP35637 526 aaKnown RBP eCLIP11.82□□□□□ -0.52
MRPL28-208ENST00000469744 PCLOQ9Y6V0 5065 aa11.82□□□□□ -0.52
MRPL28-208ENST00000469744 LRP1BQ9NZR2 4599 aa11.81□□□□□ -0.52
MRPL28-208ENST00000469744 LINC01561Q8N1V8 128 aa11.81□□□□□ -0.52
MRPL28-208ENST00000469744 COPS9Q8WXC6 57 aa11.81□□□□□ -0.52
MRPL28-208ENST00000469744 ZNF625Q96I27 306 aaPredicted RBP11.81□□□□□ -0.52
MRPL28-208ENST00000469744 RYR1P21817 5038 aa11.8□□□□□ -0.52
MRPL28-208ENST00000469744 IGHV3OR16-9A0A0B4J2B5 98 aa11.8□□□□□ -0.52
MRPL28-208ENST00000469744 RBX1P62877 108 aa11.8□□□□□ -0.52
MRPL28-208ENST00000469744 ADAMTSL4-AS1Q5T5F5 129 aa11.8□□□□□ -0.52
MRPL28-208ENST00000469744 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
MRPL28-208ENST00000469744 HSPG2P98160 4391 aa11.78□□□□□ -0.52
MRPL28-208ENST00000469744 A0A087WZ39 114 aa11.78□□□□□ -0.52
MRPL28-208ENST00000469744 TMEM262E9PQX1 116 aa11.77□□□□□ -0.52
MRPL28-208ENST00000469744 IGHV3-33P01772 117 aa11.77□□□□□ -0.52
MRPL28-208ENST00000469744 SS18Q15532 418 aa11.77□□□□□ -0.52
MRPL28-208ENST00000469744 SFTA2Q6UW10 78 aa11.77□□□□□ -0.52
MRPL28-208ENST00000469744 F8W1H4 67 aa11.76□□□□□ -0.53
MRPL28-208ENST00000469744 PRSS2P07478 247 aa11.76□□□□□ -0.53
MRPL28-208ENST00000469744 COX7B2Q8TF08 81 aa11.76□□□□□ -0.53
MRPL28-208ENST00000469744 KRTAP4-5Q9BYR2 181 aa11.76□□□□□ -0.53
MRPL28-208ENST00000469744 ERG28Q9UKR5 140 aa11.76□□□□□ -0.53
MRPL28-208ENST00000469744 TRBV20-1A0A075B6N2 111 aa11.76□□□□□ -0.53
MRPL28-208ENST00000469744 CDK2AP2O75956 126 aa11.76□□□□□ -0.53
MRPL28-208ENST00000469744 EIF4EBP3O60516 100 aaPredicted RBP11.75□□□□□ -0.53
MRPL28-208ENST00000469744 LINC01556Q5JQF7 62 aa11.75□□□□□ -0.53
MRPL28-208ENST00000469744 LELP1Q5T871 98 aa11.75□□□□□ -0.53
MRPL28-208ENST00000469744 Q8N3U1 123 aa11.75□□□□□ -0.53
MRPL28-208ENST00000469744 A0A087WTM6 91 aa11.74□□□□□ -0.53
MRPL28-208ENST00000469744 Q9HAA7 133 aa11.74□□□□□ -0.53
MRPL28-208ENST00000469744 DNAH5Q8TE73 4624 aa11.74□□□□□ -0.53
MRPL28-208ENST00000469744 APOBP04114 4563 aaKnown RBP11.72□□□□□ -0.53
MRPL28-208ENST00000469744 IGKV3OR2-268A0A0C4DH90 116 aa11.72□□□□□ -0.53
MRPL28-208ENST00000469744 OCIAD2Q56VL3 154 aa11.72□□□□□ -0.53
MRPL28-208ENST00000469744 LINC00308Q8TCZ7 52 aa11.72□□□□□ -0.53
MRPL28-208ENST00000469744 LOC107984156A0A0G2JMH3 177 aa11.71□□□□□ -0.53
MRPL28-208ENST00000469744 MEIG1Q5JSS6 88 aa11.71□□□□□ -0.53
MRPL28-208ENST00000469744 ARL17AQ8IVW1 177 aa11.71□□□□□ -0.53
MRPL28-208ENST00000469744 IBA57-AS1B1ANH7 110 aa11.7□□□□□ -0.54
MRPL28-208ENST00000469744 H3BMG7 143 aa11.7□□□□□ -0.54
MRPL28-208ENST00000469744 TRBV30A0A0K0K1B3 111 aa11.7□□□□□ -0.54
MRPL28-208ENST00000469744 K7ERU9 68 aa11.7□□□□□ -0.54
MRPL28-208ENST00000469744 PRO0461Q9UI25 63 aa11.7□□□□□ -0.54
MRPL28-208ENST00000469744 ABCA13Q86UQ4 5058 aa11.69□□□□□ -0.54
MRPL28-208ENST00000469744 PSCAO43653 123 aa11.69□□□□□ -0.54
MRPL28-208ENST00000469744 CD164L2Q6UWJ8 174 aa11.69□□□□□ -0.54
MRPL28-208ENST00000469744 C5orf38Q86SI9 138 aa11.68□□□□□ -0.54
MRPL28-208ENST00000469744 SCGB1C2P0DMR2 95 aa11.67□□□□□ -0.54
MRPL28-208ENST00000469744 PSMB2P49721 201 aa11.67□□□□□ -0.54
MRPL28-208ENST00000469744 Q8IZM0 81 aa11.67□□□□□ -0.54
MRPL28-208ENST00000469744 LINC00269Q8N2A0 174 aa11.67□□□□□ -0.54
MRPL28-208ENST00000469744 REG3AQ06141 175 aa11.66□□□□□ -0.54
MRPL28-208ENST00000469744 TOMM7Q9P0U1 55 aa11.66□□□□□ -0.54
MRPL28-208ENST00000469744 LRCOL1A6NCL2 159 aa11.65□□□□□ -0.54
MRPL28-208ENST00000469744 TCL1BO95988 128 aa11.65□□□□□ -0.54
MRPL28-208ENST00000469744 ANGP03950 147 aaKnown RBP11.65□□□□□ -0.54
MRPL28-208ENST00000469744 XCL1P47992 114 aa11.65□□□□□ -0.54
MRPL28-208ENST00000469744 Q1RN00 199 aa11.65□□□□□ -0.54
MRPL28-208ENST00000469744 KRTAP10-1P60331 282 aa11.64□□□□□ -0.55
MRPL28-208ENST00000469744 NPC2P61916 151 aa11.64□□□□□ -0.55
MRPL28-208ENST00000469744 DAND5Q8N907 189 aa11.64□□□□□ -0.55
MRPL28-208ENST00000469744 COX7A2LO14548 114 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms