RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 CDKN2A-AS1Q9UH64 79 aa13.16□□□□□ -0.3
RTN4R-205ENST00000469601 NDUFA5Q16718 116 aa13.15□□□□□ -0.3
RTN4R-205ENST00000469601 PHF5AQ7RTV0 110 aaKnown RBP13.15□□□□□ -0.3
RTN4R-205ENST00000469601 PSORS1C2Q9UIG4 136 aa13.15□□□□□ -0.3
RTN4R-205ENST00000469601 TINCRA0A1B0GVN0 87 aa13.13□□□□□ -0.31
RTN4R-205ENST00000469601 LINC00469Q8N7U9 141 aa13.13□□□□□ -0.31
RTN4R-205ENST00000469601 PLA2G2DQ9UNK4 145 aa13.13□□□□□ -0.31
RTN4R-205ENST00000469601 FAM168BA1KXE4 195 aa13.12□□□□□ -0.31
RTN4R-205ENST00000469601 SNAPINO95295 136 aa13.12□□□□□ -0.31
RTN4R-205ENST00000469601 APOC3P02656 99 aa13.12□□□□□ -0.31
RTN4R-205ENST00000469601 CXCL5P42830 114 aa13.12□□□□□ -0.31
RTN4R-205ENST00000469601 FAM19A5Q7Z5A7 132 aaPredicted RBP13.12□□□□□ -0.31
RTN4R-205ENST00000469601 SVBPQ8N300 66 aa13.12□□□□□ -0.31
RTN4R-205ENST00000469601 CST9LQ9H4G1 147 aa13.12□□□□□ -0.31
RTN4R-205ENST00000469601 TRAPPC1Q9Y5R8 145 aa13.12□□□□□ -0.31
RTN4R-205ENST00000469601 F8VRH5 84 aa13.11□□□□□ -0.31
RTN4R-205ENST00000469601 PMVKQ15126 192 aa13.11□□□□□ -0.31
RTN4R-205ENST00000469601 C1orf137Q5JT78 98 aa13.11□□□□□ -0.31
RTN4R-205ENST00000469601 PDZD11Q5EBL8 140 aa13.1□□□□□ -0.31
RTN4R-205ENST00000469601 IGLV5-45A0A087WSX0 123 aa13.09□□□□□ -0.31
RTN4R-205ENST00000469601 M0QXV9 152 aa13.08□□□□□ -0.32
RTN4R-205ENST00000469601 FAT3Q8TDW7 4589 aa13.08□□□□□ -0.32
RTN4R-205ENST00000469601 SMIM1B2RUZ4 78 aa13.07□□□□□ -0.32
RTN4R-205ENST00000469601 LINC00614P0C842 121 aa13.07□□□□□ -0.32
RTN4R-205ENST00000469601 C9orf129Q5T035 196 aaKnown RBP13.07□□□□□ -0.32
RTN4R-205ENST00000469601 UBE2BP63146 152 aa13.06□□□□□ -0.32
RTN4R-205ENST00000469601 PKHD1L1Q86WI1 4243 aa13.06□□□□□ -0.32
RTN4R-205ENST00000469601 H3BRM9 83 aa13.05□□□□□ -0.32
RTN4R-205ENST00000469601 RAB5BP61020 215 aa13.05□□□□□ -0.32
RTN4R-205ENST00000469601 C18orf32Q8TCD1 76 aa13.05□□□□□ -0.32
RTN4R-205ENST00000469601 COX7B2Q8TF08 81 aa13.05□□□□□ -0.32
RTN4R-205ENST00000469601 IGLV7-43P04211 117 aa13.04□□□□□ -0.32
RTN4R-205ENST00000469601 KRTAP7-1Q8IUC3 87 aa13.04□□□□□ -0.32
RTN4R-205ENST00000469601 DIRC1Q969H9 104 aa13.04□□□□□ -0.32
RTN4R-205ENST00000469601 HBDP02042 147 aa13.03□□□□□ -0.32
RTN4R-205ENST00000469601 ODF1Q14990 250 aa13.02□□□□□ -0.33
RTN4R-205ENST00000469601 NDUFA6P56556 154 aa13.01□□□□□ -0.33
RTN4R-205ENST00000469601 KRTAP10-8P60410 259 aa13.01□□□□□ -0.33
RTN4R-205ENST00000469601 SPINK8P0C7L1 97 aa13□□□□□ -0.33
RTN4R-205ENST00000469601 IGLC3P0DOY3 106 aa13□□□□□ -0.33
RTN4R-205ENST00000469601 LBHQ53QV2 105 aaPredicted RBP13□□□□□ -0.33
RTN4R-205ENST00000469601 URB1-AS1Q96HZ7 61 aa13□□□□□ -0.33
RTN4R-205ENST00000469601 XAGE1AQ9HD64 81 aa13□□□□□ -0.33
RTN4R-205ENST00000469601 A0A096LNJ9 63 aa12.99□□□□□ -0.33
RTN4R-205ENST00000469601 ATP5LO75964 103 aa12.99□□□□□ -0.33
RTN4R-205ENST00000469601 KRTAP11-1Q8IUC1 163 aa12.99□□□□□ -0.33
RTN4R-205ENST00000469601 C22orf24Q9Y442 160 aa12.97□□□□□ -0.33
RTN4R-205ENST00000469601 TP73-AS1Q9UF72 201 aa12.96□□□□□ -0.33
RTN4R-205ENST00000469601 H0Y9J4 135 aa12.95□□□□□ -0.34
RTN4R-205ENST00000469601 PMCHL1Q16048 86 aa12.95□□□□□ -0.34
RTN4R-205ENST00000469601 IGLV5-39A0A0G2JS06 123 aa12.93□□□□□ -0.34
RTN4R-205ENST00000469601 NUPR1O60356 82 aa12.93□□□□□ -0.34
RTN4R-205ENST00000469601 MRPL55Q7Z7F7 128 aaKnown RBP12.93□□□□□ -0.34
RTN4R-205ENST00000469601 BAGE3Q86Y29 109 aa12.93□□□□□ -0.34
RTN4R-205ENST00000469601 CHCHD1Q96BP2 118 aaKnown RBP12.93□□□□□ -0.34
RTN4R-205ENST00000469601 YPEL4Q96NS1 127 aa12.93□□□□□ -0.34
RTN4R-205ENST00000469601 ZNF22P17026 224 aaPredicted RBP12.92□□□□□ -0.34
RTN4R-205ENST00000469601 SFTA2Q6UW10 78 aa12.9□□□□□ -0.34
RTN4R-205ENST00000469601 TMEM170BQ5T4T1 132 aa12.88□□□□□ -0.35
RTN4R-205ENST00000469601 HMCN2Q8NDA2 5059 aa12.87□□□□□ -0.35
RTN4R-205ENST00000469601 C11orf86A6NJI1 115 aa12.87□□□□□ -0.35
RTN4R-205ENST00000469601 ZNF861PO60384 105 aa12.87□□□□□ -0.35
RTN4R-205ENST00000469601 NKAPP1Q8N9T2 125 aa12.87□□□□□ -0.35
RTN4R-205ENST00000469601 CHTOPQ9Y3Y2 248 aaKnown RBP12.87□□□□□ -0.35
RTN4R-205ENST00000469601 IGLV1-50A0A075B6I6 118 aa12.86□□□□□ -0.35
RTN4R-205ENST00000469601 COX17Q14061 63 aa12.86□□□□□ -0.35
RTN4R-205ENST00000469601 IGLV5-37A0A075B6J1 123 aa12.85□□□□□ -0.35
RTN4R-205ENST00000469601 PFN2P35080 140 aa12.85□□□□□ -0.35
RTN4R-205ENST00000469601 CBLN2Q8IUK8 224 aa12.85□□□□□ -0.35
RTN4R-205ENST00000469601 IFI27L1Q96BM0 104 aa12.85□□□□□ -0.35
RTN4R-205ENST00000469601 LINC00167Q96N53 147 aa12.85□□□□□ -0.35
RTN4R-205ENST00000469601 TRAV12-1A0A0B4J245 112 aa12.84□□□□□ -0.35
RTN4R-205ENST00000469601 PRR26Q8N8Z3 221 aa12.84□□□□□ -0.35
RTN4R-205ENST00000469601 ERG28Q9UKR5 140 aa12.84□□□□□ -0.35
RTN4R-205ENST00000469601 BCE1O60756 84 aa12.83□□□□□ -0.36
RTN4R-205ENST00000469601 HSBP1O75506 76 aa12.83□□□□□ -0.36
RTN4R-205ENST00000469601 RPL28P46779 137 aaKnown RBP12.83□□□□□ -0.36
RTN4R-205ENST00000469601 RPL37AP8A6NKH3 93 aa12.81□□□□□ -0.36
RTN4R-205ENST00000469601 RPL13AP40429 203 aaKnown RBP12.81□□□□□ -0.36
RTN4R-205ENST00000469601 GAGE10A6NGK3 116 aa12.8□□□□□ -0.36
RTN4R-205ENST00000469601 KRTAP1-4P0C5Y4 121 aa12.8□□□□□ -0.36
RTN4R-205ENST00000469601 SND1-IT1Q9HBX3 110 aa12.8□□□□□ -0.36
RTN4R-205ENST00000469601 RPL24P83731 157 aaKnown RBP12.79□□□□□ -0.36
RTN4R-205ENST00000469601 ZNF625Q96I27 306 aaPredicted RBP12.79□□□□□ -0.36
RTN4R-205ENST00000469601 TRGC2P03986 189 aa12.78□□□□□ -0.36
RTN4R-205ENST00000469601 TMEM223A0PJW6 202 aa12.77□□□□□ -0.37
RTN4R-205ENST00000469601 TNXBP22105 4242 aa12.76□□□□□ -0.37
RTN4R-205ENST00000469601 FAM19A2Q8N3H0 131 aa12.76□□□□□ -0.37
RTN4R-205ENST00000469601 VPREB1P12018 145 aa12.74□□□□□ -0.37
RTN4R-205ENST00000469601 SLC7A5P1Q8MH63 180 aa12.74□□□□□ -0.37
RTN4R-205ENST00000469601 UBE2AP49459 152 aa12.73□□□□□ -0.37
RTN4R-205ENST00000469601 LINC00158P58513 81 aa12.73□□□□□ -0.37
RTN4R-205ENST00000469601 IGKV2-28A0A075B6P5 120 aa12.72□□□□□ -0.37
RTN4R-205ENST00000469601 LEPROTL1O95214 131 aa12.72□□□□□ -0.37
RTN4R-205ENST00000469601 IGKV2D-28P01615 120 aa12.72□□□□□ -0.37
RTN4R-205ENST00000469601 SERF1AO75920 110 aa12.71□□□□□ -0.37
RTN4R-205ENST00000469601 LINC00587B1AMM8 73 aa12.7□□□□□ -0.38
RTN4R-205ENST00000469601 ATP6V1G1O75348 118 aa12.7□□□□□ -0.38
RTN4R-205ENST00000469601 HERV-K104P63124 156 aa12.7□□□□□ -0.38
RTN4R-205ENST00000469601 HSPB8Q9UJY1 196 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms