RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 PRSS2P07478 247 aa6.68□□□□□ -1.34
COL4A3-204ENST00000469504 RAB14P61106 215 aa6.68□□□□□ -1.34
COL4A3-204ENST00000469504 IGLV1-50A0A075B6I6 118 aa6.67□□□□□ -1.34
COL4A3-204ENST00000469504 LOC389332A0A1B0GUA5 103 aa6.67□□□□□ -1.34
COL4A3-204ENST00000469504 LINC01549A6NIU2 74 aa6.67□□□□□ -1.34
COL4A3-204ENST00000469504 HERVK_113P63121 156 aa6.67□□□□□ -1.34
COL4A3-204ENST00000469504 UBE2BP63146 152 aa6.67□□□□□ -1.34
COL4A3-204ENST00000469504 FAM19A5Q7Z5A7 132 aaPredicted RBP6.67□□□□□ -1.34
COL4A3-204ENST00000469504 Q8IZM0 81 aa6.67□□□□□ -1.34
COL4A3-204ENST00000469504 KRTAP9-9Q9BYP9 154 aa6.67□□□□□ -1.34
COL4A3-204ENST00000469504 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
COL4A3-204ENST00000469504 FAM168BA1KXE4 195 aa6.66□□□□□ -1.34
COL4A3-204ENST00000469504 CKS1BP61024 79 aa6.66□□□□□ -1.34
COL4A3-204ENST00000469504 TIMM17AQ99595 171 aa6.66□□□□□ -1.34
COL4A3-204ENST00000469504 IGIPA6NJ69 53 aa6.65□□□□□ -1.34
COL4A3-204ENST00000469504 RPL13AP40429 203 aaKnown RBP6.65□□□□□ -1.34
COL4A3-204ENST00000469504 CXCL5P42830 114 aa6.65□□□□□ -1.34
COL4A3-204ENST00000469504 C6orf226Q5I0X4 101 aa6.65□□□□□ -1.34
COL4A3-204ENST00000469504 LINC00173Q6ZV60 143 aa6.65□□□□□ -1.34
COL4A3-204ENST00000469504 CTDSP1Q9GZU7 261 aa6.65□□□□□ -1.34
COL4A3-204ENST00000469504 TRAV9-1A0A075B6T8 112 aa6.64□□□□□ -1.35
COL4A3-204ENST00000469504 NUPR1O60356 82 aa6.64□□□□□ -1.35
COL4A3-204ENST00000469504 LBHQ53QV2 105 aaPredicted RBP6.64□□□□□ -1.35
COL4A3-204ENST00000469504 C9orf129Q5T035 196 aaKnown RBP6.64□□□□□ -1.35
COL4A3-204ENST00000469504 C2orf82Q6UX34 121 aa6.64□□□□□ -1.35
COL4A3-204ENST00000469504 CARHSP1Q9Y2V2 147 aaKnown RBP6.64□□□□□ -1.35
COL4A3-204ENST00000469504 F8VRH5 84 aa6.63□□□□□ -1.35
COL4A3-204ENST00000469504 KRTAP7-1Q8IUC3 87 aa6.63□□□□□ -1.35
COL4A3-204ENST00000469504 TOMM6Q96B49 74 aa6.63□□□□□ -1.35
COL4A3-204ENST00000469504 ALKBH7Q9BT30 221 aaPredicted RBP6.63□□□□□ -1.35
COL4A3-204ENST00000469504 GEMIN7Q9H840 131 aaKnown RBP6.63□□□□□ -1.35
COL4A3-204ENST00000469504 TOMM7Q9P0U1 55 aa6.63□□□□□ -1.35
COL4A3-204ENST00000469504 TP73-AS1Q9UF72 201 aa6.63□□□□□ -1.35
COL4A3-204ENST00000469504 ZNF861PO60384 105 aa6.62□□□□□ -1.35
COL4A3-204ENST00000469504 KRTAP11-1Q8IUC1 163 aa6.62□□□□□ -1.35
COL4A3-204ENST00000469504 PRR26Q8N8Z3 221 aa6.62□□□□□ -1.35
COL4A3-204ENST00000469504 KRTAP1-4P0C5Y4 121 aa6.61□□□□□ -1.35
COL4A3-204ENST00000469504 UQCC3Q6UW78 93 aa6.61□□□□□ -1.35
COL4A3-204ENST00000469504 ERASQ7Z444 233 aa6.61□□□□□ -1.35
COL4A3-204ENST00000469504 CDKN2A-AS1Q9UH64 79 aa6.61□□□□□ -1.35
COL4A3-204ENST00000469504 COX19Q49B96 90 aa6.6□□□□□ -1.35
COL4A3-204ENST00000469504 PDZD11Q5EBL8 140 aa6.6□□□□□ -1.35
COL4A3-204ENST00000469504 CLLU1Q5K131 121 aa6.6□□□□□ -1.35
COL4A3-204ENST00000469504 C22orf24Q9Y442 160 aa6.6□□□□□ -1.35
COL4A3-204ENST00000469504 RNF213Q63HN8 5207 aa6.59□□□□□ -1.35
COL4A3-204ENST00000469504 KRTAP4-8A0A0G2JLE6 195 aa6.59□□□□□ -1.35
COL4A3-204ENST00000469504 TINCRA0A1B0GVN0 87 aa6.59□□□□□ -1.35
COL4A3-204ENST00000469504 ZC2HC1BQ5TFG8 222 aa6.59□□□□□ -1.35
COL4A3-204ENST00000469504 IGLV5-45A0A087WSX0 123 aa6.58□□□□□ -1.36
COL4A3-204ENST00000469504 LINC01546A6NGU7 62 aa6.58□□□□□ -1.36
COL4A3-204ENST00000469504 S100PP25815 95 aa6.58□□□□□ -1.36
COL4A3-204ENST00000469504 RPL28P46779 137 aaKnown RBP6.58□□□□□ -1.36
COL4A3-204ENST00000469504 MRPL55Q7Z7F7 128 aaKnown RBP6.58□□□□□ -1.36
COL4A3-204ENST00000469504 LINC00469Q8N7U9 141 aa6.58□□□□□ -1.36
COL4A3-204ENST00000469504 SCGB3A1Q96QR1 104 aa6.58□□□□□ -1.36
COL4A3-204ENST00000469504 GNB1LQ9BYB4 327 aa6.58□□□□□ -1.36
COL4A3-204ENST00000469504 SMIM1B2RUZ4 78 aa6.57□□□□□ -1.36
COL4A3-204ENST00000469504 XAGE1AQ9HD64 81 aa6.57□□□□□ -1.36
COL4A3-204ENST00000469504 BCE1O60756 84 aa6.56□□□□□ -1.36
COL4A3-204ENST00000469504 COX7B2Q8TF08 81 aa6.56□□□□□ -1.36
COL4A3-204ENST00000469504 TMEM218A2RU14 115 aa6.55□□□□□ -1.36
COL4A3-204ENST00000469504 H3BRM9 83 aa6.55□□□□□ -1.36
COL4A3-204ENST00000469504 PMVKQ15126 192 aa6.55□□□□□ -1.36
COL4A3-204ENST00000469504 KIAA1644Q3SXP7 199 aa6.55□□□□□ -1.36
COL4A3-204ENST00000469504 SEC11CQ9BY50 192 aa6.55□□□□□ -1.36
COL4A3-204ENST00000469504 IGLV5-37A0A075B6J1 123 aa6.54□□□□□ -1.36
COL4A3-204ENST00000469504 ADCYAP1P18509 176 aa6.54□□□□□ -1.36
COL4A3-204ENST00000469504 CST9LQ9H4G1 147 aa6.54□□□□□ -1.36
COL4A3-204ENST00000469504 LPAP08519 4548 aa6.54□□□□□ -1.36
COL4A3-204ENST00000469504 ATP5LO75964 103 aa6.53□□□□□ -1.36
COL4A3-204ENST00000469504 FA2HQ7L5A8 372 aa6.53□□□□□ -1.36
COL4A3-204ENST00000469504 SMCO4Q9NRQ5 59 aa6.53□□□□□ -1.36
COL4A3-204ENST00000469504 CRYGAP11844 174 aa6.52□□□□□ -1.37
COL4A3-204ENST00000469504 SFTA2Q6UW10 78 aa6.52□□□□□ -1.37
COL4A3-204ENST00000469504 NKAPP1Q8N9T2 125 aa6.52□□□□□ -1.37
COL4A3-204ENST00000469504 LINC00167Q96N53 147 aa6.52□□□□□ -1.37
COL4A3-204ENST00000469504 RHEBQ15382 184 aa6.51□□□□□ -1.37
COL4A3-204ENST00000469504 PRR4Q16378 134 aa6.51□□□□□ -1.37
COL4A3-204ENST00000469504 SPINK8P0C7L1 97 aa6.5□□□□□ -1.37
COL4A3-204ENST00000469504 IGLC3P0DOY3 106 aa6.5□□□□□ -1.37
COL4A3-204ENST00000469504 CTAG1AP78358 180 aa6.5□□□□□ -1.37
COL4A3-204ENST00000469504 COX17Q14061 63 aa6.5□□□□□ -1.37
COL4A3-204ENST00000469504 IGLV5-39A0A0G2JS06 123 aa6.49□□□□□ -1.37
COL4A3-204ENST00000469504 FABP9Q0Z7S8 132 aa6.49□□□□□ -1.37
COL4A3-204ENST00000469504 FAM229BQ4G0N7 80 aa6.49□□□□□ -1.37
COL4A3-204ENST00000469504 TYMSOSQ8TAI1 123 aa6.49□□□□□ -1.37
COL4A3-204ENST00000469504 RPL37AP8A6NKH3 93 aa6.48□□□□□ -1.37
COL4A3-204ENST00000469504 UBE2AP49459 152 aa6.48□□□□□ -1.37
COL4A3-204ENST00000469504 RAB5BP61020 215 aa6.48□□□□□ -1.37
COL4A3-204ENST00000469504 RPL24P83731 157 aaKnown RBP6.48□□□□□ -1.37
COL4A3-204ENST00000469504 C10orf91Q5T1B1 145 aa6.48□□□□□ -1.37
COL4A3-204ENST00000469504 KRTAP13-1Q8IUC0 172 aa6.48□□□□□ -1.37
COL4A3-204ENST00000469504 A0A087X002 238 aa6.47□□□□□ -1.37
COL4A3-204ENST00000469504 A0A0U1RQV1 116 aa6.47□□□□□ -1.37
COL4A3-204ENST00000469504 HBDP02042 147 aa6.47□□□□□ -1.37
COL4A3-204ENST00000469504 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
COL4A3-204ENST00000469504 GAGE10A6NGK3 116 aa6.46□□□□□ -1.38
COL4A3-204ENST00000469504 LINC00614P0C842 121 aa6.46□□□□□ -1.38
COL4A3-204ENST00000469504 ERG28Q9UKR5 140 aa6.46□□□□□ -1.38
COL4A3-204ENST00000469504 A0A096LNJ9 63 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms