RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 IGHV3OR16-9A0A0B4J2B5 98 aa12.42□□□□□ -0.42
MCF2L-221ENST00000469415 LINC00959A0A1B0GUT2 108 aa12.42□□□□□ -0.42
MCF2L-221ENST00000469415 LST1O00453 97 aa12.42□□□□□ -0.42
MCF2L-221ENST00000469415 LINC00269Q8N2A0 174 aa12.42□□□□□ -0.42
MCF2L-221ENST00000469415 MRPL23Q16540 153 aaKnown RBP12.41□□□□□ -0.42
MCF2L-221ENST00000469415 CELA1Q9UNI1 258 aa12.41□□□□□ -0.42
MCF2L-221ENST00000469415 PRR3P79522 188 aaKnown RBP12.4□□□□□ -0.42
MCF2L-221ENST00000469415 FAM218AQ96MZ4 157 aa12.4□□□□□ -0.42
MCF2L-221ENST00000469415 TRAV8-4A0A0B4J246 113 aa12.4□□□□□ -0.42
MCF2L-221ENST00000469415 ANGP03950 147 aaKnown RBP12.4□□□□□ -0.42
MCF2L-221ENST00000469415 LINC00337Q8N6G1 96 aa12.4□□□□□ -0.42
MCF2L-221ENST00000469415 FBN1P35555 2871 aaKnown RBP12.4□□□□□ -0.42
MCF2L-221ENST00000469415 TTC32Q5I0X7 151 aa12.4□□□□□ -0.43
MCF2L-221ENST00000469415 FAM110AQ9BQ89 295 aa12.4□□□□□ -0.43
MCF2L-221ENST00000469415 PRO0255Q9UI72 69 aa12.4□□□□□ -0.43
MCF2L-221ENST00000469415 IGHV4-28A0A0C4DH34 117 aa12.39□□□□□ -0.43
MCF2L-221ENST00000469415 ATP5G1P05496 136 aa12.39□□□□□ -0.43
MCF2L-221ENST00000469415 CRPP02741 224 aa12.38□□□□□ -0.43
MCF2L-221ENST00000469415 DAD1P61803 113 aa12.38□□□□□ -0.43
MCF2L-221ENST00000469415 CCL18P55774 89 aa12.37□□□□□ -0.43
MCF2L-221ENST00000469415 C9orf116Q5BN46 136 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-221ENST00000469415 GAGE2BQ13066 116 aa12.37□□□□□ -0.43
MCF2L-221ENST00000469415 GAGE2EQ4V326 116 aa12.37□□□□□ -0.43
MCF2L-221ENST00000469415 GAGE2DQ9UEU5 116 aa12.37□□□□□ -0.43
MCF2L-221ENST00000469415 NDUFV3P56181 108 aaKnown RBP12.36□□□□□ -0.43
MCF2L-221ENST00000469415 M0QXV9 152 aa12.36□□□□□ -0.43
MCF2L-221ENST00000469415 COX7A2LO14548 114 aa12.35□□□□□ -0.43
MCF2L-221ENST00000469415 C9orf66Q5T8R8 295 aa12.35□□□□□ -0.43
MCF2L-221ENST00000469415 IGKV2-28A0A075B6P5 120 aa12.35□□□□□ -0.43
MCF2L-221ENST00000469415 IGKV2D-28P01615 120 aa12.35□□□□□ -0.43
MCF2L-221ENST00000469415 SS18Q15532 418 aa12.35□□□□□ -0.43
MCF2L-221ENST00000469415 KIR2DL5BQ8NHK3 375 aa12.35□□□□□ -0.43
MCF2L-221ENST00000469415 SNCGO76070 127 aa12.34□□□□□ -0.43
MCF2L-221ENST00000469415 A0A087WZ39 114 aa12.34□□□□□ -0.43
MCF2L-221ENST00000469415 FAM19A3Q7Z5A8 133 aa12.34□□□□□ -0.43
MCF2L-221ENST00000469415 C15orf53Q8NAA6 179 aa12.34□□□□□ -0.43
MCF2L-221ENST00000469415 TENM3Q9P273 2699 aa12.33□□□□□ -0.44
MCF2L-221ENST00000469415 OXLD1Q5BKU9 147 aa12.33□□□□□ -0.44
MCF2L-221ENST00000469415 COL6A5A8TX70 2615 aa12.33□□□□□ -0.44
MCF2L-221ENST00000469415 LOC107984640A0A0U1RRK4 108 aa12.33□□□□□ -0.44
MCF2L-221ENST00000469415 BAALC-AS2P0C853 105 aa12.33□□□□□ -0.44
MCF2L-221ENST00000469415 SLPIP03973 132 aa12.32□□□□□ -0.44
MCF2L-221ENST00000469415 RETNQ9HD89 108 aa12.32□□□□□ -0.44
MCF2L-221ENST00000469415 SMIM11BQ8TCY0 68 aa12.32□□□□□ -0.44
MCF2L-221ENST00000469415 MALP21145 153 aa12.31□□□□□ -0.44
MCF2L-221ENST00000469415 H3BT86 120 aa12.3□□□□□ -0.44
MCF2L-221ENST00000469415 A0A087WYN8 130 aa12.3□□□□□ -0.44
MCF2L-221ENST00000469415 COPS9Q8WXC6 57 aa12.3□□□□□ -0.44
MCF2L-221ENST00000469415 NBEAL1Q6ZS30 2694 aa12.3□□□□□ -0.44
MCF2L-221ENST00000469415 CHCHD10Q8WYQ3 142 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-221ENST00000469415 IGHV4-30-4P0DP06 118 aa12.29□□□□□ -0.44
MCF2L-221ENST00000469415 REG3AQ06141 175 aa12.28□□□□□ -0.44
MCF2L-221ENST00000469415 C6orf223Q8N319 242 aa12.28□□□□□ -0.44
MCF2L-221ENST00000469415 KLK12Q9UKR0 248 aa12.28□□□□□ -0.44
MCF2L-221ENST00000469415 KLK5Q9Y337 293 aaPredicted RBP12.28□□□□□ -0.44
MCF2L-221ENST00000469415 TRAV13-2A0A0B4J235 113 aa12.27□□□□□ -0.44
MCF2L-221ENST00000469415 APOC4P55056 127 aa12.27□□□□□ -0.45
MCF2L-221ENST00000469415 LECT2O14960 151 aa12.26□□□□□ -0.45
MCF2L-221ENST00000469415 DNAL4O96015 105 aa12.26□□□□□ -0.45
MCF2L-221ENST00000469415 C9orf129Q5T035 196 aaKnown RBP12.25□□□□□ -0.45
MCF2L-221ENST00000469415 LINC00612Q8N6U2 182 aa12.25□□□□□ -0.45
MCF2L-221ENST00000469415 IBA57-AS1B1ANH7 110 aa12.24□□□□□ -0.45
MCF2L-221ENST00000469415 SMIM9A6NGZ8 99 aa12.24□□□□□ -0.45
MCF2L-221ENST00000469415 LYRM9A8MSI8 78 aa12.24□□□□□ -0.45
MCF2L-221ENST00000469415 GAGE2AQ6NT46 116 aa12.23□□□□□ -0.45
MCF2L-221ENST00000469415 NCR3O14931 201 aa12.23□□□□□ -0.45
MCF2L-221ENST00000469415 Q8NAQ8 132 aa12.23□□□□□ -0.45
MCF2L-221ENST00000469415 SPART-AS1P0CW21 52 aa12.22□□□□□ -0.45
MCF2L-221ENST00000469415 C10orf25Q5T742 122 aa12.22□□□□□ -0.45
MCF2L-221ENST00000469415 A0A1B0GUV1 79 aa12.21□□□□□ -0.45
MCF2L-221ENST00000469415 UNQ6190/PRO20217Q6UXQ8 127 aa12.21□□□□□ -0.45
MCF2L-221ENST00000469415 RPL28P46779 137 aaKnown RBP12.2□□□□□ -0.46
MCF2L-221ENST00000469415 C14orf132Q9NPU4 83 aa12.2□□□□□ -0.46
MCF2L-221ENST00000469415 MGAM2Q2M2H8 2515 aa12.19□□□□□ -0.46
MCF2L-221ENST00000469415 CD164L2Q6UWJ8 174 aa12.19□□□□□ -0.46
MCF2L-221ENST00000469415 PRB2P02812 416 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-221ENST00000469415 Q8IZM0 81 aa12.17□□□□□ -0.46
MCF2L-221ENST00000469415 C22orf24Q9Y442 160 aa12.17□□□□□ -0.46
MCF2L-221ENST00000469415 TRACP01848 142 aa12.17□□□□□ -0.46
MCF2L-221ENST00000469415 Q8NDZ9 215 aa12.16□□□□□ -0.46
MCF2L-221ENST00000469415 XAGE1AQ9HD64 81 aa12.16□□□□□ -0.46
MCF2L-221ENST00000469415 KIAA0087Q14695 138 aa12.16□□□□□ -0.46
MCF2L-221ENST00000469415 SPAG11BQ08648 103 aa12.15□□□□□ -0.46
MCF2L-221ENST00000469415 HIGD2BQ4VC39 106 aa12.15□□□□□ -0.46
MCF2L-221ENST00000469415 MIFP14174 115 aa12.15□□□□□ -0.46
MCF2L-221ENST00000469415 SMCR5Q8TEV8 140 aa12.15□□□□□ -0.46
MCF2L-221ENST00000469415 WFDC10BQ8IUB3 73 aa12.13□□□□□ -0.47
MCF2L-221ENST00000469415 Q6ZTC4 211 aa12.13□□□□□ -0.47
MCF2L-221ENST00000469415 CYSRT1A8MQ03 144 aa12.12□□□□□ -0.47
MCF2L-221ENST00000469415 KRTAP10-11P60412 298 aa12.12□□□□□ -0.47
MCF2L-221ENST00000469415 S100A7L2Q5SY68 101 aa12.12□□□□□ -0.47
MCF2L-221ENST00000469415 FAM236AA0A1B0GUQ0 79 aa12.11□□□□□ -0.47
MCF2L-221ENST00000469415 FAM236BA0A1B0GV22 79 aa12.11□□□□□ -0.47
MCF2L-221ENST00000469415 RPL18AQ02543 176 aaKnown RBP12.11□□□□□ -0.47
MCF2L-221ENST00000469415 C6orf99Q4VX62 202 aa12.1□□□□□ -0.47
MCF2L-221ENST00000469415 ENHOQ6UWT2 76 aa12.09□□□□□ -0.47
MCF2L-221ENST00000469415 BAHCC1Q9P281 2608 aa12.09□□□□□ -0.47
MCF2L-221ENST00000469415 LELP1Q5T871 98 aa12.09□□□□□ -0.47
MCF2L-221ENST00000469415 LYPD5Q6UWN5 251 aa12.09□□□□□ -0.47
MCF2L-221ENST00000469415 KPRPQ5T749 579 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms