RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 C1orf167Q5SNV9 1468 aa-0.45□□□□□ -2.48
ATG3-204ENST00000467275 A0A1B0GWA3 101 aa-0.45□□□□□ -2.48
ATG3-204ENST00000467275 SPRR2BP35325 72 aa-0.45□□□□□ -2.48
ATG3-204ENST00000467275 LCN9Q8WX39 176 aa-0.45□□□□□ -2.48
ATG3-204ENST00000467275 C12orf57Q99622 126 aa-0.45□□□□□ -2.48
ATG3-204ENST00000467275 CHD1O14646 1710 aa-0.45□□□□□ -2.48
ATG3-204ENST00000467275 ARHGAP5Q13017 1502 aa-0.45□□□□□ -2.48
ATG3-204ENST00000467275 TOP2BQ02880 1626 aa-0.46□□□□□ -2.48
ATG3-204ENST00000467275 PKHD1P08F94 4074 aa-0.46□□□□□ -2.48
ATG3-204ENST00000467275 SPINK4O60575 86 aa-0.46□□□□□ -2.48
ATG3-204ENST00000467275 MRPS10P82664 201 aaKnown RBP-0.46□□□□□ -2.48
ATG3-204ENST00000467275 FDCSPQ8NFU4 85 aa-0.46□□□□□ -2.48
ATG3-204ENST00000467275 LINC00846Q9NV44 126 aa-0.46□□□□□ -2.48
ATG3-204ENST00000467275 PDZD2O15018 2839 aa-0.46□□□□□ -2.48
ATG3-204ENST00000467275 SETBP1Q9Y6X0 1596 aa-0.46□□□□□ -2.48
ATG3-204ENST00000467275 COL6A3P12111 3177 aa-0.46□□□□□ -2.48
ATG3-204ENST00000467275 SAA2P0DJI9 122 aaPredicted RBP-0.47□□□□□ -2.48
ATG3-204ENST00000467275 KRTAP20-2Q3LI61 65 aa-0.47□□□□□ -2.48
ATG3-204ENST00000467275 ANKRD36A6QL64 1941 aa-0.47□□□□□ -2.48
ATG3-204ENST00000467275 KIAA0556O60303 1618 aa-0.47□□□□□ -2.48
ATG3-204ENST00000467275 LAMA5O15230 3695 aa-0.47□□□□□ -2.48
ATG3-204ENST00000467275 A0A0G2JMZ2 1700 aa-0.47□□□□□ -2.49
ATG3-204ENST00000467275 XRN1Q8IZH2 1706 aaKnown RBP-0.47□□□□□ -2.49
ATG3-204ENST00000467275 FMN2Q9NZ56 1722 aa-0.47□□□□□ -2.49
ATG3-204ENST00000467275 RYR3Q15413 4870 aa-0.47□□□□□ -2.49
ATG3-204ENST00000467275 FLNBO75369 2602 aaKnown RBP-0.48□□□□□ -2.49
ATG3-204ENST00000467275 CC2D2AQ9P2K1 1620 aa-0.48□□□□□ -2.49
ATG3-204ENST00000467275 TMEM262E9PQX1 116 aa-0.48□□□□□ -2.49
ATG3-204ENST00000467275 SNCAP37840 140 aa-0.48□□□□□ -2.49
ATG3-204ENST00000467275 KRTAP19-8Q3LI54 63 aa-0.48□□□□□ -2.49
ATG3-204ENST00000467275 ABCA3Q99758 1704 aa-0.48□□□□□ -2.49
ATG3-204ENST00000467275 SETXQ7Z333 2677 aaKnown RBP-0.48□□□□□ -2.49
ATG3-204ENST00000467275 FLGP20930 4061 aaPredicted RBP-0.48□□□□□ -2.49
ATG3-204ENST00000467275 HYDINQ4G0P3 5121 aa-0.49□□□□□ -2.49
ATG3-204ENST00000467275 CREBBPQ92793 2442 aa-0.49□□□□□ -2.49
ATG3-204ENST00000467275 CRYM-AS1A6NIL9 109 aa-0.49□□□□□ -2.49
ATG3-204ENST00000467275 KRTDAPP60985 99 aa-0.49□□□□□ -2.49
ATG3-204ENST00000467275 KLK9Q2XQG4 91 aa-0.49□□□□□ -2.49
ATG3-204ENST00000467275 DEFB105AQ8NG35 78 aa-0.49□□□□□ -2.49
ATG3-204ENST00000467275 USMG5Q96IX5 58 aa-0.49□□□□□ -2.49
ATG3-204ENST00000467275 ACANP16112 2415 aa-0.49□□□□□ -2.49
ATG3-204ENST00000467275 RYR1P21817 5038 aa-0.49□□□□□ -2.49
ATG3-204ENST00000467275 hADV29S1A0JD25 119 aa-0.5□□□□□ -2.49
ATG3-204ENST00000467275 LOC730098B7Z3J9 87 aa-0.5□□□□□ -2.49
ATG3-204ENST00000467275 HSD52Q0P140 79 aa-0.5□□□□□ -2.49
ATG3-204ENST00000467275 FXYD6Q9H0Q3 95 aa-0.5□□□□□ -2.49
ATG3-204ENST00000467275 PLEKHH2Q8IVE3 1493 aa-0.5□□□□□ -2.49
ATG3-204ENST00000467275 FAM135AQ9P2D6 1515 aa-0.5□□□□□ -2.49
ATG3-204ENST00000467275 TOPAZ1Q8N9V7 1692 aa-0.5□□□□□ -2.49
ATG3-204ENST00000467275 MARF1Q9Y4F3 1742 aaKnown RBP-0.5□□□□□ -2.49
ATG3-204ENST00000467275 PAPPA2Q9BXP8 1791 aa-0.5□□□□□ -2.49
ATG3-204ENST00000467275 COX8AP10176 69 aa-0.51□□□□□ -2.49
ATG3-204ENST00000467275 MT4P47944 62 aa-0.51□□□□□ -2.49
ATG3-204ENST00000467275 GTF2H5Q6ZYL4 71 aa-0.51□□□□□ -2.49
ATG3-204ENST00000467275 CGREF1Q99674 301 aa-0.51□□□□□ -2.49
ATG3-204ENST00000467275 USH2AO75445 5202 aa-0.52□□□□□ -2.49
ATG3-204ENST00000467275 SYS1-DBNDD2H3BUS1 97 aa-0.52□□□□□ -2.49
ATG3-204ENST00000467275 SEC11AP67812 179 aa-0.52□□□□□ -2.49
ATG3-204ENST00000467275 SVEP1Q4LDE5 3571 aa-0.52□□□□□ -2.49
ATG3-204ENST00000467275 STARD9Q9P2P6 4700 aa-0.53□□□□□ -2.49
ATG3-204ENST00000467275 NLRP1Q9C000 1473 aa-0.53□□□□□ -2.49
ATG3-204ENST00000467275 ABCC5O15440 1437 aa-0.53□□□□□ -2.49
ATG3-204ENST00000467275 A0A087WVE0 104 aa-0.53□□□□□ -2.49
ATG3-204ENST00000467275 C20orf202A1L168 122 aa-0.53□□□□□ -2.49
ATG3-204ENST00000467275 UBR4Q5T4S7 5183 aa-0.53□□□□□ -2.5
ATG3-204ENST00000467275 KIAA1109Q2LD37 5005 aa-0.54□□□□□ -2.5
ATG3-204ENST00000467275 C7orf77A4D0Y5 90 aa-0.54□□□□□ -2.5
ATG3-204ENST00000467275 M0R2T5 61 aa-0.54□□□□□ -2.5
ATG3-204ENST00000467275 NF1P21359 2839 aa-0.54□□□□□ -2.5
ATG3-204ENST00000467275 MAP1AP78559 2803 aaPredicted RBP-0.54□□□□□ -2.5
ATG3-204ENST00000467275 CNOT1A5YKK6 2376 aaKnown RBP-0.54□□□□□ -2.5
ATG3-204ENST00000467275 ZFYVE16Q7Z3T8 1539 aa-0.54□□□□□ -2.5
ATG3-204ENST00000467275 DOPEY1Q5JWR5 2465 aa-0.55□□□□□ -2.5
ATG3-204ENST00000467275 A0A1B0GU69 56 aa-0.55□□□□□ -2.5
ATG3-204ENST00000467275 CPSF4LA6NMK7 179 aaKnown RBP-0.55□□□□□ -2.5
ATG3-204ENST00000467275 APLNQ9ULZ1 77 aa-0.55□□□□□ -2.5
ATG3-204ENST00000467275 IQSEC2Q5JU85 1478 aa-0.55□□□□□ -2.5
ATG3-204ENST00000467275 KNDC1Q76NI1 1749 aa-0.55□□□□□ -2.5
ATG3-204ENST00000467275 NCOA3Q9Y6Q9 1424 aa-0.55□□□□□ -2.5
ATG3-204ENST00000467275 EPPK1P58107 5090 aaKnown RBP-0.56□□□□□ -2.5
ATG3-204ENST00000467275 VAMP8Q9BV40 100 aa-0.56□□□□□ -2.5
ATG3-204ENST00000467275 CACFD1Q9UGQ2 172 aa-0.56□□□□□ -2.5
ATG3-204ENST00000467275 STAB2Q8WWQ8 2551 aa-0.56□□□□□ -2.5
ATG3-204ENST00000467275 TRBV25-1A0A075B6N4 114 aa-0.57□□□□□ -2.5
ATG3-204ENST00000467275 NDUFC1O43677 76 aa-0.57□□□□□ -2.5
ATG3-204ENST00000467275 HIVEP1P15822 2718 aa-0.57□□□□□ -2.5
ATG3-204ENST00000467275 NBEAL1Q6ZS30 2694 aa-0.57□□□□□ -2.5
ATG3-204ENST00000467275 LYSTQ99698 3801 aa-0.57□□□□□ -2.5
ATG3-204ENST00000467275 BIRC6Q9NR09 4857 aa-0.58□□□□□ -2.5
ATG3-204ENST00000467275 SHPRHQ149N8 1683 aa-0.58□□□□□ -2.5
ATG3-204ENST00000467275 CCDC141Q6ZP82 1450 aa-0.58□□□□□ -2.5
ATG3-204ENST00000467275 A0A0G2JND7 137 aa-0.58□□□□□ -2.5
ATG3-204ENST00000467275 C6orf201Q7Z4U5 140 aa-0.58□□□□□ -2.5
ATG3-204ENST00000467275 CRIPTQ9P021 101 aa-0.58□□□□□ -2.5
ATG3-204ENST00000467275 TARBP1Q13395 1621 aaKnown RBP-0.58□□□□□ -2.5
ATG3-204ENST00000467275 KIAA1551Q9HCM1 1747 aa-0.58□□□□□ -2.5
ATG3-204ENST00000467275 PRDM15P57071 1507 aaPredicted RBP-0.59□□□□□ -2.5
ATG3-204ENST00000467275 NKTRP30414 1462 aaKnown RBP-0.59□□□□□ -2.5
ATG3-204ENST00000467275 H3BQF6 201 aa-0.59□□□□□ -2.5
ATG3-204ENST00000467275 H7BZZ5 65 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms