RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 IGLL5B9A064 214 aa14.27□□□□□ -0.12
PPP1R3F-203ENST00000466508 MALP21145 153 aa14.27□□□□□ -0.12
PPP1R3F-203ENST00000466508 A0A1W2PPM0 123 aa14.26□□□□□ -0.13
PPP1R3F-203ENST00000466508 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.25□□□□□ -0.13
PPP1R3F-203ENST00000466508 NHLRC4P0CG21 123 aaPredicted RBP14.25□□□□□ -0.13
PPP1R3F-203ENST00000466508 A0A0U1RRA0 63 aa14.25□□□□□ -0.13
PPP1R3F-203ENST00000466508 DNAH10OSP0CZ25 163 aa14.25□□□□□ -0.13
PPP1R3F-203ENST00000466508 NPC2P61916 151 aa14.25□□□□□ -0.13
PPP1R3F-203ENST00000466508 LINC00588Q9Y4M8 146 aa14.25□□□□□ -0.13
PPP1R3F-203ENST00000466508 A0A0B4J2C4 111 aa14.24□□□□□ -0.13
PPP1R3F-203ENST00000466508 UBE2V1Q13404 147 aa14.24□□□□□ -0.13
PPP1R3F-203ENST00000466508 PGPEP1Q9NXJ5 209 aa14.24□□□□□ -0.13
PPP1R3F-203ENST00000466508 CCL18P55774 89 aa14.23□□□□□ -0.13
PPP1R3F-203ENST00000466508 KIAA0087Q14695 138 aa14.23□□□□□ -0.13
PPP1R3F-203ENST00000466508 LINC00308Q8TCZ7 52 aa14.23□□□□□ -0.13
PPP1R3F-203ENST00000466508 IBA57-AS1B1ANH7 110 aa14.23□□□□□ -0.13
PPP1R3F-203ENST00000466508 EIF4EBP3O60516 100 aaPredicted RBP14.23□□□□□ -0.13
PPP1R3F-203ENST00000466508 COPS9Q8WXC6 57 aa14.23□□□□□ -0.13
PPP1R3F-203ENST00000466508 PRO1854Q9UHT4 67 aa14.23□□□□□ -0.13
PPP1R3F-203ENST00000466508 FABP2P12104 132 aa14.22□□□□□ -0.13
PPP1R3F-203ENST00000466508 CXCL5P42830 114 aa14.21□□□□□ -0.13
PPP1R3F-203ENST00000466508 KLK5Q9Y337 293 aaPredicted RBP14.21□□□□□ -0.13
PPP1R3F-203ENST00000466508 CKS1BP61024 79 aa14.21□□□□□ -0.14
PPP1R3F-203ENST00000466508 CFAP161Q6P656 301 aa14.21□□□□□ -0.14
PPP1R3F-203ENST00000466508 C2orf82Q6UX34 121 aa14.2□□□□□ -0.14
PPP1R3F-203ENST00000466508 PPDPFQ9H3Y8 114 aa14.2□□□□□ -0.14
PPP1R3F-203ENST00000466508 TSPAN13O95857 204 aa14.19□□□□□ -0.14
PPP1R3F-203ENST00000466508 KRTAP26-1Q6PEX3 210 aa14.18□□□□□ -0.14
PPP1R3F-203ENST00000466508 SOSTDC1Q6X4U4 206 aa14.18□□□□□ -0.14
PPP1R3F-203ENST00000466508 GAGE10A6NGK3 116 aa14.18□□□□□ -0.14
PPP1R3F-203ENST00000466508 MIR7-3HGQ8N6C7 128 aa14.18□□□□□ -0.14
PPP1R3F-203ENST00000466508 ERG28Q9UKR5 140 aa14.18□□□□□ -0.14
PPP1R3F-203ENST00000466508 K7EP34 96 aa14.17□□□□□ -0.14
PPP1R3F-203ENST00000466508 LINC00158P58513 81 aa14.17□□□□□ -0.14
PPP1R3F-203ENST00000466508 SPAG11BQ08648 103 aa14.17□□□□□ -0.14
PPP1R3F-203ENST00000466508 GTF2H5Q6ZYL4 71 aa14.17□□□□□ -0.14
PPP1R3F-203ENST00000466508 UPK3BQ9BT76 320 aa14.17□□□□□ -0.14
PPP1R3F-203ENST00000466508 SPCS1Q9Y6A9 102 aa14.17□□□□□ -0.14
PPP1R3F-203ENST00000466508 C1orf43Q9BWL3 253 aa14.16□□□□□ -0.14
PPP1R3F-203ENST00000466508 PFN2P35080 140 aa14.15□□□□□ -0.14
PPP1R3F-203ENST00000466508 DYNC2H1Q8NCM8 4307 aaKnown RBP14.14□□□□□ -0.15
PPP1R3F-203ENST00000466508 IGKV2D-24A0A075B6R9 120 aa14.11□□□□□ -0.15
PPP1R3F-203ENST00000466508 COX17Q14061 63 aa14.11□□□□□ -0.15
PPP1R3F-203ENST00000466508 C6orf223Q8N319 242 aa14.11□□□□□ -0.15
PPP1R3F-203ENST00000466508 CSMD3Q7Z407 3707 aa14.1□□□□□ -0.15
PPP1R3F-203ENST00000466508 APLNQ9ULZ1 77 aa14.1□□□□□ -0.15
PPP1R3F-203ENST00000466508 LINC00526Q96FQ7 95 aa14.1□□□□□ -0.15
PPP1R3F-203ENST00000466508 Q9HAA7 133 aa14.1□□□□□ -0.15
PPP1R3F-203ENST00000466508 H7C2G1 150 aa14.09□□□□□ -0.15
PPP1R3F-203ENST00000466508 LOC107984156A0A0G2JMH3 177 aa14.08□□□□□ -0.16
PPP1R3F-203ENST00000466508 ARL17AQ8IVW1 177 aa14.08□□□□□ -0.16
PPP1R3F-203ENST00000466508 Q1RN00 199 aa14.08□□□□□ -0.16
PPP1R3F-203ENST00000466508 LYRM7Q5U5X0 104 aa14.08□□□□□ -0.16
PPP1R3F-203ENST00000466508 UNQ6190/PRO20217Q6UXQ8 127 aa14.08□□□□□ -0.16
PPP1R3F-203ENST00000466508 NTN5Q8WTR8 489 aaPredicted RBP14.08□□□□□ -0.16
PPP1R3F-203ENST00000466508 NUPR2A6NF83 97 aa14.07□□□□□ -0.16
PPP1R3F-203ENST00000466508 C10orf25Q5T742 122 aa14.07□□□□□ -0.16
PPP1R3F-203ENST00000466508 C15orf56Q8N910 161 aa14.07□□□□□ -0.16
PPP1R3F-203ENST00000466508 SND1-IT1Q9HBX3 110 aa14.07□□□□□ -0.16
PPP1R3F-203ENST00000466508 LYSTQ99698 3801 aa14.06□□□□□ -0.16
PPP1R3F-203ENST00000466508 DNAH1Q9P2D7 4330 aa14.06□□□□□ -0.16
PPP1R3F-203ENST00000466508 RPL13AP40429 203 aaKnown RBP14.06□□□□□ -0.16
PPP1R3F-203ENST00000466508 C9orf116Q5BN46 136 aaPredicted RBP14.06□□□□□ -0.16
PPP1R3F-203ENST00000466508 DNAH7Q8WXX0 4024 aa14.05□□□□□ -0.16
PPP1R3F-203ENST00000466508 ZNF561-AS1K7EIQ3 104 aa14.05□□□□□ -0.16
PPP1R3F-203ENST00000466508 GVQW2A0A096LPI5 108 aaPredicted RBP14.04□□□□□ -0.16
PPP1R3F-203ENST00000466508 PSMB2P49721 201 aa14.04□□□□□ -0.16
PPP1R3F-203ENST00000466508 HIGD2BQ4VC39 106 aa14.04□□□□□ -0.16
PPP1R3F-203ENST00000466508 TENM2Q9NT68 2774 aa14.04□□□□□ -0.16
PPP1R3F-203ENST00000466508 TRBV30A0A0K0K1B3 111 aa14.02□□□□□ -0.16
PPP1R3F-203ENST00000466508 UBE2DNLQ8IWF7 75 aa14.02□□□□□ -0.16
PPP1R3F-203ENST00000466508 MUC7Q8TAX7 377 aa14.02□□□□□ -0.16
PPP1R3F-203ENST00000466508 WWC2-AS2Q96NR7 200 aa14.02□□□□□ -0.16
PPP1R3F-203ENST00000466508 RMI2Q96E14 147 aa14.01□□□□□ -0.17
PPP1R3F-203ENST00000466508 H3BMG7 143 aa14.01□□□□□ -0.17
PPP1R3F-203ENST00000466508 SCGB1C2P0DMR2 95 aa14.01□□□□□ -0.17
PPP1R3F-203ENST00000466508 IGKV2-28A0A075B6P5 120 aa14□□□□□ -0.17
PPP1R3F-203ENST00000466508 TRIAP1O43715 76 aa14□□□□□ -0.17
PPP1R3F-203ENST00000466508 IGKV2D-28P01615 120 aa14□□□□□ -0.17
PPP1R3F-203ENST00000466508 C2orf48Q96LS8 159 aa14□□□□□ -0.17
PPP1R3F-203ENST00000466508 CAMK2N2Q96S95 79 aa14□□□□□ -0.17
PPP1R3F-203ENST00000466508 C6orf48Q9UBA6 75 aa14□□□□□ -0.17
PPP1R3F-203ENST00000466508 TRBV20-1A0A075B6N2 111 aa13.99□□□□□ -0.17
PPP1R3F-203ENST00000466508 TRAV13-2A0A0B4J235 113 aa13.99□□□□□ -0.17
PPP1R3F-203ENST00000466508 LINC00337Q8N6G1 96 aa13.98□□□□□ -0.17
PPP1R3F-203ENST00000466508 TCL1BO95988 128 aa13.97□□□□□ -0.17
PPP1R3F-203ENST00000466508 PLECQ15149 4684 aaKnown RBP13.97□□□□□ -0.17
PPP1R3F-203ENST00000466508 F8WDY8 70 aa13.97□□□□□ -0.17
PPP1R3F-203ENST00000466508 KRTAP1-5Q9BYS1 174 aa13.95□□□□□ -0.18
PPP1R3F-203ENST00000466508 COX6CP09669 75 aa13.95□□□□□ -0.18
PPP1R3F-203ENST00000466508 Q6ZRU5 148 aa13.95□□□□□ -0.18
PPP1R3F-203ENST00000466508 NDUFC2O95298 119 aa13.94□□□□□ -0.18
PPP1R3F-203ENST00000466508 STARD9Q9P2P6 4700 aa13.93□□□□□ -0.18
PPP1R3F-203ENST00000466508 CASC10Q5T4H9 136 aa13.93□□□□□ -0.18
PPP1R3F-203ENST00000466508 F8W1H4 67 aa13.92□□□□□ -0.18
PPP1R3F-203ENST00000466508 USP17L23D6RBM5 183 aa13.91□□□□□ -0.18
PPP1R3F-203ENST00000466508 SYCNQ0VAF6 134 aa13.9□□□□□ -0.18
PPP1R3F-203ENST00000466508 PRO0461Q9UI25 63 aa13.9□□□□□ -0.18
PPP1R3F-203ENST00000466508 ATXN8Q156A1 80 aa13.89□□□□□ -0.19
PPP1R3F-203ENST00000466508 RPL28P46779 137 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms