RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ICOSQ9Y6W8 199 aa12.89□□□□□ -0.35
CAPN3-209ENST00000466222 TRIAP1O43715 76 aa12.88□□□□□ -0.35
CAPN3-209ENST00000466222 TRBV10-2A0A0K0K1G8 114 aa12.87□□□□□ -0.35
CAPN3-209ENST00000466222 LINC00242Q5T6M2 205 aa12.87□□□□□ -0.35
CAPN3-209ENST00000466222 NHLRC4P0CG21 123 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-209ENST00000466222 PPDPFQ9H3Y8 114 aa12.86□□□□□ -0.35
CAPN3-209ENST00000466222 H7C423 109 aa12.85□□□□□ -0.35
CAPN3-209ENST00000466222 CSMD3Q7Z407 3707 aa12.84□□□□□ -0.35
CAPN3-209ENST00000466222 RPL13AP40429 203 aaKnown RBP12.84□□□□□ -0.35
CAPN3-209ENST00000466222 COX6A2Q02221 97 aa12.84□□□□□ -0.35
CAPN3-209ENST00000466222 A0A1B0GV72 72 aa12.83□□□□□ -0.36
CAPN3-209ENST00000466222 H3BT86 120 aa12.83□□□□□ -0.36
CAPN3-209ENST00000466222 CDC42SE2Q9NRR3 84 aa12.83□□□□□ -0.36
CAPN3-209ENST00000466222 SMIM1B2RUZ4 78 aa12.82□□□□□ -0.36
CAPN3-209ENST00000466222 HERV-K104P63124 156 aa12.82□□□□□ -0.36
CAPN3-209ENST00000466222 TMEM243Q9BU79 118 aa12.82□□□□□ -0.36
CAPN3-209ENST00000466222 Q9H8V8 135 aa12.82□□□□□ -0.36
CAPN3-209ENST00000466222 TRBV6-8A0A0A6YYG3 113 aa12.81□□□□□ -0.36
CAPN3-209ENST00000466222 TRAV10A0A0B4J240 114 aa12.81□□□□□ -0.36
CAPN3-209ENST00000466222 MRPL23Q16540 153 aaKnown RBP12.81□□□□□ -0.36
CAPN3-209ENST00000466222 UBE2L6O14933 153 aa12.8□□□□□ -0.36
CAPN3-209ENST00000466222 LINC00308Q8TCZ7 52 aa12.8□□□□□ -0.36
CAPN3-209ENST00000466222 TGP01266 2768 aa12.8□□□□□ -0.36
CAPN3-209ENST00000466222 LST1O00453 97 aa12.8□□□□□ -0.36
CAPN3-209ENST00000466222 LYSTQ99698 3801 aa12.79□□□□□ -0.36
CAPN3-209ENST00000466222 NPC2P61916 151 aa12.79□□□□□ -0.36
CAPN3-209ENST00000466222 NTN5Q8WTR8 489 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-209ENST00000466222 DNAH7Q8WXX0 4024 aa12.79□□□□□ -0.36
CAPN3-209ENST00000466222 XGP55808 180 aa12.78□□□□□ -0.36
CAPN3-209ENST00000466222 ZNF625Q96I27 306 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-209ENST00000466222 TRAV13-1A0A0B4J241 112 aa12.78□□□□□ -0.36
CAPN3-209ENST00000466222 C2orf82Q6UX34 121 aa12.78□□□□□ -0.36
CAPN3-209ENST00000466222 MT-ATP8P03928 68 aa12.77□□□□□ -0.37
CAPN3-209ENST00000466222 GAGE6Q13070 117 aa12.77□□□□□ -0.37
CAPN3-209ENST00000466222 UBE2WQ96B02 151 aa12.77□□□□□ -0.37
CAPN3-209ENST00000466222 H3BNG1 76 aa12.76□□□□□ -0.37
CAPN3-209ENST00000466222 LYPD5Q6UWN5 251 aa12.76□□□□□ -0.37
CAPN3-209ENST00000466222 Q8N3U1 123 aa12.76□□□□□ -0.37
CAPN3-209ENST00000466222 CHCHD5Q9BSY4 110 aa12.76□□□□□ -0.37
CAPN3-209ENST00000466222 MEIG1Q5JSS6 88 aa12.75□□□□□ -0.37
CAPN3-209ENST00000466222 DAND5Q8N907 189 aa12.74□□□□□ -0.37
CAPN3-209ENST00000466222 ESRGQ1W209 222 aa12.74□□□□□ -0.37
CAPN3-209ENST00000466222 DYNC2H1Q8NCM8 4307 aaKnown RBP12.74□□□□□ -0.37
CAPN3-209ENST00000466222 CKS1BP61024 79 aa12.73□□□□□ -0.37
CAPN3-209ENST00000466222 STARD9Q9P2P6 4700 aa12.73□□□□□ -0.37
CAPN3-209ENST00000466222 PLECQ15149 4684 aaKnown RBP12.72□□□□□ -0.37
CAPN3-209ENST00000466222 TRAV8-4A0A0B4J246 113 aa12.72□□□□□ -0.37
CAPN3-209ENST00000466222 COX7A2LO14548 114 aa12.72□□□□□ -0.37
CAPN3-209ENST00000466222 IGLV4-60A0A075B6I1 120 aa12.71□□□□□ -0.37
CAPN3-209ENST00000466222 CLEC2BQ92478 149 aa12.71□□□□□ -0.37
CAPN3-209ENST00000466222 TENM2Q9NT68 2774 aa12.71□□□□□ -0.38
CAPN3-209ENST00000466222 SOSTDC1Q6X4U4 206 aa12.7□□□□□ -0.38
CAPN3-209ENST00000466222 TEX49A0A1B0GTD5 131 aa12.69□□□□□ -0.38
CAPN3-209ENST00000466222 LELP1Q5T871 98 aa12.69□□□□□ -0.38
CAPN3-209ENST00000466222 FAM240AA0A1B0GVK7 77 aa12.68□□□□□ -0.38
CAPN3-209ENST00000466222 COX7B2Q8TF08 81 aa12.68□□□□□ -0.38
CAPN3-209ENST00000466222 WFDC10BQ8IUB3 73 aa12.67□□□□□ -0.38
CAPN3-209ENST00000466222 SNCGO76070 127 aa12.66□□□□□ -0.38
CAPN3-209ENST00000466222 TRAV13-2A0A0B4J235 113 aa12.66□□□□□ -0.38
CAPN3-209ENST00000466222 TRACP01848 142 aa12.66□□□□□ -0.38
CAPN3-209ENST00000466222 C15orf53Q8NAA6 179 aa12.66□□□□□ -0.38
CAPN3-209ENST00000466222 A0A0U1RRA0 63 aa12.65□□□□□ -0.38
CAPN3-209ENST00000466222 Q6Q795 121 aa12.65□□□□□ -0.38
CAPN3-209ENST00000466222 IGKV3OR2-268A0A0C4DH90 116 aa12.64□□□□□ -0.39
CAPN3-209ENST00000466222 LINC00588Q9Y4M8 146 aa12.64□□□□□ -0.39
CAPN3-209ENST00000466222 CLPSL2Q6UWE3 100 aa12.63□□□□□ -0.39
CAPN3-209ENST00000466222 APLNQ9ULZ1 77 aa12.62□□□□□ -0.39
CAPN3-209ENST00000466222 A0A087WZ39 114 aa12.62□□□□□ -0.39
CAPN3-209ENST00000466222 IGHV3OR16-9A0A0B4J2B5 98 aa12.62□□□□□ -0.39
CAPN3-209ENST00000466222 DNAH1Q9P2D7 4330 aa12.61□□□□□ -0.39
CAPN3-209ENST00000466222 GAGE2BQ13066 116 aa12.61□□□□□ -0.39
CAPN3-209ENST00000466222 GAGE2EQ4V326 116 aa12.61□□□□□ -0.39
CAPN3-209ENST00000466222 GAGE2DQ9UEU5 116 aa12.61□□□□□ -0.39
CAPN3-209ENST00000466222 A0A1B0GUV1 79 aa12.6□□□□□ -0.39
CAPN3-209ENST00000466222 IBA57-AS1B1ANH7 110 aa12.6□□□□□ -0.39
CAPN3-209ENST00000466222 CRPP02741 224 aa12.6□□□□□ -0.39
CAPN3-209ENST00000466222 RPL28P46779 137 aaKnown RBP12.6□□□□□ -0.39
CAPN3-209ENST00000466222 ACYP1P07311 99 aa12.6□□□□□ -0.39
CAPN3-209ENST00000466222 LINC00269Q8N2A0 174 aa12.6□□□□□ -0.39
CAPN3-209ENST00000466222 ANGP03950 147 aaKnown RBP12.59□□□□□ -0.39
CAPN3-209ENST00000466222 MIR7-3HGQ8N6C7 128 aa12.59□□□□□ -0.39
CAPN3-209ENST00000466222 NUPR2A6NF83 97 aa12.58□□□□□ -0.39
CAPN3-209ENST00000466222 LINC01561Q8N1V8 128 aa12.58□□□□□ -0.4
CAPN3-209ENST00000466222 TOMM7Q9P0U1 55 aa12.58□□□□□ -0.4
CAPN3-209ENST00000466222 CCL18P55774 89 aa12.57□□□□□ -0.4
CAPN3-209ENST00000466222 SND1-IT1Q9HBX3 110 aa12.57□□□□□ -0.4
CAPN3-209ENST00000466222 KLK12Q9UKR0 248 aa12.57□□□□□ -0.4
CAPN3-209ENST00000466222 LINC00959A0A1B0GUT2 108 aa12.56□□□□□ -0.4
CAPN3-209ENST00000466222 LINC00158P58513 81 aa12.55□□□□□ -0.4
CAPN3-209ENST00000466222 ANAPC13Q9BS18 74 aa12.55□□□□□ -0.4
CAPN3-209ENST00000466222 KLK5Q9Y337 293 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-209ENST00000466222 IGLV10-54A0A075B6I4 117 aa12.54□□□□□ -0.4
CAPN3-209ENST00000466222 SS18Q15532 418 aa12.54□□□□□ -0.4
CAPN3-209ENST00000466222 MUC7Q8TAX7 377 aa12.54□□□□□ -0.4
CAPN3-209ENST00000466222 REG3AQ06141 175 aa12.53□□□□□ -0.4
CAPN3-209ENST00000466222 IGKV2-28A0A075B6P5 120 aa12.52□□□□□ -0.4
CAPN3-209ENST00000466222 IGKV2D-28P01615 120 aa12.52□□□□□ -0.4
CAPN3-209ENST00000466222 BAALC-AS2P0C853 105 aa12.52□□□□□ -0.4
CAPN3-209ENST00000466222 ENHOQ6UWT2 76 aa12.52□□□□□ -0.4
CAPN3-209ENST00000466222 LINC00337Q8N6G1 96 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms