RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 VAMP8Q9BV40 100 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 PKD1L1Q8TDX9 2849 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 PLEKHH2Q8IVE3 1493 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 XRN1Q8IZH2 1706 aaKnown RBP-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 A0A1B0GU69 56 aa-0.19□□□□□ -2.44
CCDC93-205ENST00000466171 C7orf77A4D0Y5 90 aa-0.19□□□□□ -2.44
CCDC93-205ENST00000466171 CGREF1Q99674 301 aa-0.19□□□□□ -2.44
CCDC93-205ENST00000466171 APLNQ9ULZ1 77 aa-0.19□□□□□ -2.44
CCDC93-205ENST00000466171 PRKDCP78527 4128 aaKnown RBP-0.19□□□□□ -2.44
CCDC93-205ENST00000466171 CHD1O14646 1710 aa-0.19□□□□□ -2.44
CCDC93-205ENST00000466171 SPTBN1Q01082 2364 aaKnown RBP-0.19□□□□□ -2.44
CCDC93-205ENST00000466171 ABCC5O15440 1437 aa-0.2□□□□□ -2.44
CCDC93-205ENST00000466171 PIEZO2Q9H5I5 2752 aa-0.2□□□□□ -2.44
CCDC93-205ENST00000466171 MRC2Q9UBG0 1479 aa-0.2□□□□□ -2.44
CCDC93-205ENST00000466171 A0A0G2JMZ2 1700 aa-0.2□□□□□ -2.44
CCDC93-205ENST00000466171 GNGT2O14610 69 aa-0.2□□□□□ -2.44
CCDC93-205ENST00000466171 C6orf201Q7Z4U5 140 aa-0.2□□□□□ -2.44
CCDC93-205ENST00000466171 DEFB107AQ8IZN7 70 aa-0.2□□□□□ -2.44
CCDC93-205ENST00000466171 ABCA3Q99758 1704 aa-0.21□□□□□ -2.44
CCDC93-205ENST00000466171 FMN2Q9NZ56 1722 aa-0.21□□□□□ -2.44
CCDC93-205ENST00000466171 CSPG4Q6UVK1 2322 aa-0.21□□□□□ -2.44
CCDC93-205ENST00000466171 CPSF4LA6NMK7 179 aaKnown RBP-0.21□□□□□ -2.44
CCDC93-205ENST00000466171 H3BQF6 201 aa-0.21□□□□□ -2.44
CCDC93-205ENST00000466171 GNGT1P63211 74 aa-0.21□□□□□ -2.44
CCDC93-205ENST00000466171 PSMG4Q5JS54 123 aa-0.21□□□□□ -2.44
CCDC93-205ENST00000466171 LINC00846Q9NV44 126 aa-0.21□□□□□ -2.44
CCDC93-205ENST00000466171 CACFD1Q9UGQ2 172 aa-0.21□□□□□ -2.44
CCDC93-205ENST00000466171 AP4S1Q9Y587 144 aa-0.21□□□□□ -2.44
CCDC93-205ENST00000466171 GOLGA4Q13439 2230 aaKnown RBP-0.21□□□□□ -2.44
CCDC93-205ENST00000466171 GVINP1Q7Z2Y8 2422 aa-0.22□□□□□ -2.44
CCDC93-205ENST00000466171 CCDC141Q6ZP82 1450 aa-0.22□□□□□ -2.44
CCDC93-205ENST00000466171 STAB1Q9NY15 2570 aa-0.22□□□□□ -2.44
CCDC93-205ENST00000466171 M0R2T5 61 aa-0.22□□□□□ -2.44
CCDC93-205ENST00000466171 S100A10P60903 97 aa-0.22□□□□□ -2.44
CCDC93-205ENST00000466171 PMCHL2Q9BQD1 86 aa-0.22□□□□□ -2.44
CCDC93-205ENST00000466171 CRIPTQ9P021 101 aa-0.22□□□□□ -2.44
CCDC93-205ENST00000466171 KNDC1Q76NI1 1749 aa-0.22□□□□□ -2.44
CCDC93-205ENST00000466171 PDCD11Q14690 1871 aaKnown RBP-0.22□□□□□ -2.45
CCDC93-205ENST00000466171 ZFYVE16Q7Z3T8 1539 aa-0.23□□□□□ -2.45
CCDC93-205ENST00000466171 PAPPA2Q9BXP8 1791 aa-0.23□□□□□ -2.45
CCDC93-205ENST00000466171 TMEM218A2RU14 115 aa-0.23□□□□□ -2.45
CCDC93-205ENST00000466171 H0Y9P7 68 aa-0.23□□□□□ -2.45
CCDC93-205ENST00000466171 NDUFC1O43677 76 aa-0.23□□□□□ -2.45
CCDC93-205ENST00000466171 UQCRHP07919 91 aa-0.23□□□□□ -2.45
CCDC93-205ENST00000466171 S100PP25815 95 aa-0.23□□□□□ -2.45
CCDC93-205ENST00000466171 SPRR2BP35325 72 aa-0.23□□□□□ -2.45
CCDC93-205ENST00000466171 PMCHL1Q16048 86 aa-0.23□□□□□ -2.45
CCDC93-205ENST00000466171 NCOA3Q9Y6Q9 1424 aa-0.23□□□□□ -2.45
CCDC93-205ENST00000466171 IQSEC2Q5JU85 1478 aa-0.23□□□□□ -2.45
CCDC93-205ENST00000466171 MLH3Q9UHC1 1453 aa-0.23□□□□□ -2.45
CCDC93-205ENST00000466171 COL4A6Q14031 1691 aa-0.24□□□□□ -2.45
CCDC93-205ENST00000466171 MARF1Q9Y4F3 1742 aaKnown RBP-0.24□□□□□ -2.45
CCDC93-205ENST00000466171 MUC12Q9UKN1 5478 aa-0.24□□□□□ -2.45
CCDC93-205ENST00000466171 LRP1BQ9NZR2 4599 aa-0.24□□□□□ -2.45
CCDC93-205ENST00000466171 TRBV25-1A0A075B6N4 114 aa-0.24□□□□□ -2.45
CCDC93-205ENST00000466171 I3L3M4 83 aa-0.24□□□□□ -2.45
CCDC93-205ENST00000466171 MT-ATP8P03928 68 aa-0.24□□□□□ -2.45
CCDC93-205ENST00000466171 TCEAL7Q9BRU2 100 aa-0.24□□□□□ -2.45
CCDC93-205ENST00000466171 MUC2Q02817 5179 aa-0.24□□□□□ -2.45
CCDC93-205ENST00000466171 DCHS2Q6V1P9 2916 aa-0.25□□□□□ -2.45
CCDC93-205ENST00000466171 ATP6V1G2-DDX39BF2Z307 99 aa-0.25□□□□□ -2.45
CCDC93-205ENST00000466171 C14orf144Q96I85 54 aa-0.25□□□□□ -2.45
CCDC93-205ENST00000466171 TRGV9Q99603 122 aa-0.25□□□□□ -2.45
CCDC93-205ENST00000466171 EDC4Q6P2E9 1401 aaKnown RBP-0.25□□□□□ -2.45
CCDC93-205ENST00000466171 NKTRP30414 1462 aaKnown RBP-0.25□□□□□ -2.45
CCDC93-205ENST00000466171 URB1O60287 2271 aaKnown RBP-0.25□□□□□ -2.45
CCDC93-205ENST00000466171 EP300Q09472 2414 aaPredicted RBP-0.25□□□□□ -2.45
CCDC93-205ENST00000466171 FLNAP21333 2647 aaKnown RBP-0.25□□□□□ -2.45
CCDC93-205ENST00000466171 ZANQ9Y493 2812 aa-0.25□□□□□ -2.45
CCDC93-205ENST00000466171 MAP1BP46821 2468 aaKnown RBP-0.26□□□□□ -2.45
CCDC93-205ENST00000466171 TARBP1Q13395 1621 aaKnown RBP-0.26□□□□□ -2.45
CCDC93-205ENST00000466171 PRDM15P57071 1507 aaPredicted RBP-0.26□□□□□ -2.45
CCDC93-205ENST00000466171 ANKRD36BQ8N2N9 1353 aa-0.26□□□□□ -2.45
CCDC93-205ENST00000466171 TRAV30A0A087WSZ9 112 aa-0.26□□□□□ -2.45
CCDC93-205ENST00000466171 H7BZZ5 65 aa-0.26□□□□□ -2.45
CCDC93-205ENST00000466171 ATOX1O00244 68 aa-0.26□□□□□ -2.45
CCDC93-205ENST00000466171 H1FX-AS1Q4G0G2 97 aa-0.26□□□□□ -2.45
CCDC93-205ENST00000466171 ATRQ13535 2644 aa-0.27□□□□□ -2.45
CCDC93-205ENST00000466171 SLIT1O75093 1534 aa-0.27□□□□□ -2.45
CCDC93-205ENST00000466171 CUX1P39880 1505 aa-0.27□□□□□ -2.45
CCDC93-205ENST00000466171 RAPGEF2Q9Y4G8 1499 aa-0.27□□□□□ -2.45
CCDC93-205ENST00000466171 CNTLNQ9NXG0 1405 aa-0.27□□□□□ -2.45
CCDC93-205ENST00000466171 ARMS2P0C7Q2 107 aa-0.27□□□□□ -2.45
CCDC93-205ENST00000466171 COL5A1-AS1Q5SY13 56 aa-0.27□□□□□ -2.45
CCDC93-205ENST00000466171 SPTA1P02549 2419 aa-0.27□□□□□ -2.45
CCDC93-205ENST00000466171 MON2Q7Z3U7 1717 aa-0.27□□□□□ -2.45
CCDC93-205ENST00000466171 WNK1Q9H4A3 2382 aa-0.27□□□□□ -2.45
CCDC93-205ENST00000466171 PEG3Q9GZU2 1588 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 PKHD1P08F94 4074 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 FYCO1Q9BQS8 1478 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 APC2O95996 2303 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 UQCRHLA0A096LP55 91 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 SPTY2D1-AS1A0A0U1RR47 76 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 MPC2O95563 127 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 FAUP35544 74 aaKnown RBP-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 RBP2P50120 134 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 DEFB135Q30KP9 77 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 KRTAP19-7Q3SYF9 63 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 ETDBQ3ZM63 59 aa-0.28□□□□□ -2.45
CCDC93-205ENST00000466171 SERP2Q8N6R1 65 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms