RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 A4D1N5 150 aa4.15□□□□□ -1.75
CHMP3-206ENST00000466032 PRSS29PA6NIE9 313 aa4.15□□□□□ -1.75
CHMP3-206ENST00000466032 C3orf84H3BNL1 204 aa4.15□□□□□ -1.75
CHMP3-206ENST00000466032 UQCRQO14949 82 aa4.15□□□□□ -1.75
CHMP3-206ENST00000466032 UBE2D1P51668 147 aa4.15□□□□□ -1.75
CHMP3-206ENST00000466032 FXYD2P54710 66 aa4.15□□□□□ -1.75
CHMP3-206ENST00000466032 NTM-AS1Q6ZSK4 140 aa4.15□□□□□ -1.75
CHMP3-206ENST00000466032 TP73-AS1Q9UF72 201 aa4.15□□□□□ -1.75
CHMP3-206ENST00000466032 TRAV8-4A0A0B4J246 113 aa4.14□□□□□ -1.75
CHMP3-206ENST00000466032 MYMXA0A1B0GTQ4 84 aa4.14□□□□□ -1.75
CHMP3-206ENST00000466032 F8VRH5 84 aa4.14□□□□□ -1.75
CHMP3-206ENST00000466032 SCGB1C2P0DMR2 95 aa4.14□□□□□ -1.75
CHMP3-206ENST00000466032 RPL39P62891 51 aaKnown RBP4.14□□□□□ -1.75
CHMP3-206ENST00000466032 LINC01556Q5JQF7 62 aa4.14□□□□□ -1.75
CHMP3-206ENST00000466032 FAM19A3Q7Z5A8 133 aa4.14□□□□□ -1.75
CHMP3-206ENST00000466032 MUC7Q8TAX7 377 aa4.14□□□□□ -1.75
CHMP3-206ENST00000466032 BAALCQ8WXS3 180 aa4.14□□□□□ -1.75
CHMP3-206ENST00000466032 AMELXQ99217 191 aa4.14□□□□□ -1.75
CHMP3-206ENST00000466032 CDC42SE2Q9NRR3 84 aa4.14□□□□□ -1.75
CHMP3-206ENST00000466032 Q9UF83 564 aa4.14□□□□□ -1.75
CHMP3-206ENST00000466032 IGLV4-3A0A075B6K6 122 aa4.13□□□□□ -1.75
CHMP3-206ENST00000466032 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.13□□□□□ -1.75
CHMP3-206ENST00000466032 IGKV2-29A2NJV5 120 aaPredicted RBP4.13□□□□□ -1.75
CHMP3-206ENST00000466032 DPM2O94777 84 aa4.13□□□□□ -1.75
CHMP3-206ENST00000466032 CXCL5P42830 114 aa4.13□□□□□ -1.75
CHMP3-206ENST00000466032 HERVK_113P63121 156 aa4.13□□□□□ -1.75
CHMP3-206ENST00000466032 SS18Q15532 418 aa4.13□□□□□ -1.75
CHMP3-206ENST00000466032 ESRGQ1W209 222 aa4.13□□□□□ -1.75
CHMP3-206ENST00000466032 LINC00173Q6ZV60 143 aa4.13□□□□□ -1.75
CHMP3-206ENST00000466032 NFE4Q86UQ8 179 aa4.13□□□□□ -1.75
CHMP3-206ENST00000466032 RMI2Q96E14 147 aa4.13□□□□□ -1.75
CHMP3-206ENST00000466032 LINC00526Q96FQ7 95 aa4.13□□□□□ -1.75
CHMP3-206ENST00000466032 KRTAP4-4Q9BYR3 166 aa4.13□□□□□ -1.75
CHMP3-206ENST00000466032 NHP2Q9NX24 153 aaKnown RBP4.13□□□□□ -1.75
CHMP3-206ENST00000466032 APLNQ9ULZ1 77 aa4.13□□□□□ -1.75
CHMP3-206ENST00000466032 TRAV8-3A0A0A6YYJ7 113 aa4.12□□□□□ -1.75
CHMP3-206ENST00000466032 TINCRA0A1B0GVN0 87 aa4.12□□□□□ -1.75
CHMP3-206ENST00000466032 IGKCP01834 107 aa4.12□□□□□ -1.75
CHMP3-206ENST00000466032 CRPP02741 224 aa4.12□□□□□ -1.75
CHMP3-206ENST00000466032 DNAH10OSP0CZ25 163 aa4.12□□□□□ -1.75
CHMP3-206ENST00000466032 CRYGAP11844 174 aa4.12□□□□□ -1.75
CHMP3-206ENST00000466032 TMEM258P61165 79 aa4.12□□□□□ -1.75
CHMP3-206ENST00000466032 HERVK_113P61574 105 aa4.12□□□□□ -1.75
CHMP3-206ENST00000466032 MIAQ16674 131 aa4.12□□□□□ -1.75
CHMP3-206ENST00000466032 MEIG1Q5JSS6 88 aa4.12□□□□□ -1.75
CHMP3-206ENST00000466032 UBE2DNLQ8IWF7 75 aa4.12□□□□□ -1.75
CHMP3-206ENST00000466032 LINC01561Q8N1V8 128 aa4.12□□□□□ -1.75
CHMP3-206ENST00000466032 STAB2Q8WWQ8 2551 aa4.11□□□□□ -1.75
CHMP3-206ENST00000466032 PRKDCP78527 4128 aaKnown RBP4.11□□□□□ -1.75
CHMP3-206ENST00000466032 TENM3Q9P273 2699 aa4.11□□□□□ -1.75
CHMP3-206ENST00000466032 C11orf86A6NJI1 115 aa4.11□□□□□ -1.75
CHMP3-206ENST00000466032 NDUFC2-KCTD14E9PQ53 114 aa4.11□□□□□ -1.75
CHMP3-206ENST00000466032 CCDC179H3BU77 68 aa4.11□□□□□ -1.75
CHMP3-206ENST00000466032 ANGP03950 147 aaKnown RBP4.11□□□□□ -1.75
CHMP3-206ENST00000466032 TMEM170BQ5T4T1 132 aa4.11□□□□□ -1.75
CHMP3-206ENST00000466032 SFTA2Q6UW10 78 aa4.11□□□□□ -1.75
CHMP3-206ENST00000466032 SDIM1Q6ZPB5 146 aa4.11□□□□□ -1.75
CHMP3-206ENST00000466032 C3orf22Q8N5N4 141 aa4.11□□□□□ -1.75
CHMP3-206ENST00000466032 CARD19Q96LW7 228 aa4.11□□□□□ -1.75
CHMP3-206ENST00000466032 PPDPFQ9H3Y8 114 aa4.11□□□□□ -1.75
CHMP3-206ENST00000466032 PRR34Q9NV39 138 aa4.11□□□□□ -1.75
CHMP3-206ENST00000466032 KRTAP29-1A8MX34 341 aaPredicted RBP4.1□□□□□ -1.75
CHMP3-206ENST00000466032 H3BS24 57 aa4.1□□□□□ -1.75
CHMP3-206ENST00000466032 H3BT86 120 aa4.1□□□□□ -1.75
CHMP3-206ENST00000466032 NMUP48645 174 aa4.1□□□□□ -1.75
CHMP3-206ENST00000466032 REG3AQ06141 175 aa4.1□□□□□ -1.75
CHMP3-206ENST00000466032 PCP2Q8IVA1 136 aa4.1□□□□□ -1.75
CHMP3-206ENST00000466032 Q9H8V8 135 aa4.1□□□□□ -1.75
CHMP3-206ENST00000466032 MRPL35Q9NZE8 188 aaKnown RBP4.1□□□□□ -1.75
CHMP3-206ENST00000466032 LINC00588Q9Y4M8 146 aa4.1□□□□□ -1.75
CHMP3-206ENST00000466032 TGP01266 2768 aa4.09□□□□□ -1.75
CHMP3-206ENST00000466032 IGLV4-60A0A075B6I1 120 aa4.09□□□□□ -1.75
CHMP3-206ENST00000466032 IGLV5-45A0A087WSX0 123 aa4.09□□□□□ -1.75
CHMP3-206ENST00000466032 LINC00959A0A1B0GUT2 108 aa4.09□□□□□ -1.75
CHMP3-206ENST00000466032 C9JAW5 83 aa4.09□□□□□ -1.75
CHMP3-206ENST00000466032 CD164L2Q6UWJ8 174 aa4.09□□□□□ -1.75
CHMP3-206ENST00000466032 LINC00269Q8N2A0 174 aa4.09□□□□□ -1.75
CHMP3-206ENST00000466032 HUWE1Q7Z6Z7 4374 aaKnown RBP4.09□□□□□ -1.76
CHMP3-206ENST00000466032 TRAV13-1A0A0B4J241 112 aa4.08□□□□□ -1.76
CHMP3-206ENST00000466032 A0A0B4J2C4 111 aa4.08□□□□□ -1.76
CHMP3-206ENST00000466032 IBA57-AS1B1ANH7 110 aa4.08□□□□□ -1.76
CHMP3-206ENST00000466032 FAM19A5Q7Z5A7 132 aaPredicted RBP4.08□□□□□ -1.76
CHMP3-206ENST00000466032 WFDC10BQ8IUB3 73 aa4.08□□□□□ -1.76
CHMP3-206ENST00000466032 ANKRD29Q8N6D5 301 aa4.08□□□□□ -1.76
CHMP3-206ENST00000466032 DEFB104AQ8WTQ1 72 aa4.08□□□□□ -1.76
CHMP3-206ENST00000466032 FAM104AQ969W3 186 aa4.08□□□□□ -1.76
CHMP3-206ENST00000466032 PLEKHB2Q96CS7 222 aa4.08□□□□□ -1.76
CHMP3-206ENST00000466032 HIST1H4GQ99525 98 aa4.08□□□□□ -1.76
CHMP3-206ENST00000466032 C1orf43Q9BWL3 253 aa4.08□□□□□ -1.76
CHMP3-206ENST00000466032 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
CHMP3-206ENST00000466032 KLK12Q9UKR0 248 aa4.08□□□□□ -1.76
CHMP3-206ENST00000466032 DNAH9Q9NYC9 4486 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 COL7A1Q02388 2944 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 IGLV4-69A0A075B6H9 119 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 A0A087WZ39 114 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 A0A0J9YXV3 536 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 COX7A2LO14548 114 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 SLC25A20O43772 301 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 COX7CP15954 63 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 HIST1H4AP62805 103 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms