RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 PRELID3AQ96N28 172 aa5.8□□□□□ -1.48
USP39-212ENST00000465514 PACRGQ96M98 296 aaPredicted RBP5.79□□□□□ -1.48
USP39-212ENST00000465514 LOC389332A0A1B0GUA5 103 aa5.78□□□□□ -1.48
USP39-212ENST00000465514 RPL13AP40429 203 aaKnown RBP5.78□□□□□ -1.48
USP39-212ENST00000465514 ZC2HC1BQ5TFG8 222 aa5.78□□□□□ -1.48
USP39-212ENST00000465514 TEX43Q6ZNM6 134 aa5.78□□□□□ -1.48
USP39-212ENST00000465514 LINC01561Q8N1V8 128 aa5.78□□□□□ -1.48
USP39-212ENST00000465514 PRSS47A8MTI9 375 aa5.77□□□□□ -1.49
USP39-212ENST00000465514 ATP5L2Q7Z4Y8 100 aa5.77□□□□□ -1.49
USP39-212ENST00000465514 LINC00469Q8N7U9 141 aa5.77□□□□□ -1.49
USP39-212ENST00000465514 C2orf88Q9BSF0 95 aa5.77□□□□□ -1.49
USP39-212ENST00000465514 TOMM7Q9P0U1 55 aa5.77□□□□□ -1.49
USP39-212ENST00000465514 CARHSP1Q9Y2V2 147 aaKnown RBP5.77□□□□□ -1.49
USP39-212ENST00000465514 ZNF861PO60384 105 aa5.76□□□□□ -1.49
USP39-212ENST00000465514 PRSS2P07478 247 aa5.76□□□□□ -1.49
USP39-212ENST00000465514 LINC01547P58512 204 aaPredicted RBP5.76□□□□□ -1.49
USP39-212ENST00000465514 CKS1BP61024 79 aa5.76□□□□□ -1.49
USP39-212ENST00000465514 C6orf226Q5I0X4 101 aa5.76□□□□□ -1.49
USP39-212ENST00000465514 Q6ZN92 141 aa5.76□□□□□ -1.49
USP39-212ENST00000465514 LINC00173Q6ZV60 143 aa5.76□□□□□ -1.49
USP39-212ENST00000465514 AMELXQ99217 191 aa5.76□□□□□ -1.49
USP39-212ENST00000465514 VCX2Q9H322 139 aa5.76□□□□□ -1.49
USP39-212ENST00000465514 MAP1LC3AQ9H492 121 aa5.76□□□□□ -1.49
USP39-212ENST00000465514 CYSLTR1Q9Y271 337 aa5.76□□□□□ -1.49
USP39-212ENST00000465514 C22orf24Q9Y442 160 aa5.76□□□□□ -1.49
USP39-212ENST00000465514 C2orf66Q6UXQ4 117 aa5.75□□□□□ -1.49
USP39-212ENST00000465514 Q8N8P6 123 aa5.75□□□□□ -1.49
USP39-212ENST00000465514 XAGE1AQ9HD64 81 aa5.75□□□□□ -1.49
USP39-212ENST00000465514 LAMTOR2Q9Y2Q5 125 aa5.75□□□□□ -1.49
USP39-212ENST00000465514 TMEM238LA0A1B0GVL6 79 aa5.74□□□□□ -1.49
USP39-212ENST00000465514 NUPR1O60356 82 aa5.74□□□□□ -1.49
USP39-212ENST00000465514 TSPAN13O95857 204 aa5.74□□□□□ -1.49
USP39-212ENST00000465514 LBHQ53QV2 105 aaPredicted RBP5.74□□□□□ -1.49
USP39-212ENST00000465514 FAM19A3Q7Z5A8 133 aa5.74□□□□□ -1.49
USP39-212ENST00000465514 COMMD7Q86VX2 200 aa5.74□□□□□ -1.49
USP39-212ENST00000465514 Q8IZM0 81 aa5.74□□□□□ -1.49
USP39-212ENST00000465514 ALKBH7Q9BT30 221 aaPredicted RBP5.74□□□□□ -1.49
USP39-212ENST00000465514 CTDSP1Q9GZU7 261 aa5.74□□□□□ -1.49
USP39-212ENST00000465514 IGIPA6NJ69 53 aa5.73□□□□□ -1.49
USP39-212ENST00000465514 NPSP0C0P6 89 aa5.73□□□□□ -1.49
USP39-212ENST00000465514 NDUFA5Q16718 116 aa5.73□□□□□ -1.49
USP39-212ENST00000465514 ORMDL2Q53FV1 153 aa5.73□□□□□ -1.49
USP39-212ENST00000465514 F8VRH5 84 aa5.72□□□□□ -1.49
USP39-212ENST00000465514 HERVK_113P63121 156 aa5.72□□□□□ -1.49
USP39-212ENST00000465514 CDKN2A-AS1Q9UH64 79 aa5.72□□□□□ -1.49
USP39-212ENST00000465514 RPL28P46779 137 aaKnown RBP5.71□□□□□ -1.5
USP39-212ENST00000465514 SEC11AP67812 179 aa5.71□□□□□ -1.5
USP39-212ENST00000465514 MRPL55Q7Z7F7 128 aaKnown RBP5.71□□□□□ -1.5
USP39-212ENST00000465514 SLC7A5P1Q8MH63 180 aa5.71□□□□□ -1.5
USP39-212ENST00000465514 CDIP1Q9H305 208 aa5.71□□□□□ -1.5
USP39-212ENST00000465514 GEMIN7Q9H840 131 aaKnown RBP5.71□□□□□ -1.5
USP39-212ENST00000465514 TP73-AS1Q9UF72 201 aa5.71□□□□□ -1.5
USP39-212ENST00000465514 A0A087X002 238 aa5.7□□□□□ -1.5
USP39-212ENST00000465514 RPL37AP8A6NKH3 93 aa5.7□□□□□ -1.5
USP39-212ENST00000465514 K7EMI3 77 aa5.7□□□□□ -1.5
USP39-212ENST00000465514 BCE1O60756 84 aa5.7□□□□□ -1.5
USP39-212ENST00000465514 MT-ND4LP03901 98 aa5.7□□□□□ -1.5
USP39-212ENST00000465514 PAPPA-AS1Q5QFB9 102 aa5.7□□□□□ -1.5
USP39-212ENST00000465514 UQCC3Q6UW78 93 aa5.7□□□□□ -1.5
USP39-212ENST00000465514 ANAPC16Q96DE5 110 aa5.7□□□□□ -1.5
USP39-212ENST00000465514 LINC00167Q96N53 147 aa5.7□□□□□ -1.5
USP39-212ENST00000465514 NXT2Q9NPJ8 142 aaKnown RBP5.7□□□□□ -1.5
USP39-212ENST00000465514 CRYGAP11844 174 aa5.69□□□□□ -1.5
USP39-212ENST00000465514 PNRC1Q12796 327 aaPredicted RBP5.69□□□□□ -1.5
USP39-212ENST00000465514 TYMSOSQ8TAI1 123 aa5.69□□□□□ -1.5
USP39-212ENST00000465514 TOMM6Q96B49 74 aa5.69□□□□□ -1.5
USP39-212ENST00000465514 TIMM17AQ99595 171 aa5.69□□□□□ -1.5
USP39-212ENST00000465514 GAGE10A6NGK3 116 aa5.68□□□□□ -1.5
USP39-212ENST00000465514 G0S2P27469 103 aa5.68□□□□□ -1.5
USP39-212ENST00000465514 CXCL5P42830 114 aa5.68□□□□□ -1.5
USP39-212ENST00000465514 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
USP39-212ENST00000465514 ANAPC11Q9NYG5 84 aa5.68□□□□□ -1.5
USP39-212ENST00000465514 SMIM1B2RUZ4 78 aa5.67□□□□□ -1.5
USP39-212ENST00000465514 ATP6V1G1O75348 118 aa5.67□□□□□ -1.5
USP39-212ENST00000465514 PDZD11Q5EBL8 140 aa5.67□□□□□ -1.5
USP39-212ENST00000465514 ERASQ7Z444 233 aa5.67□□□□□ -1.5
USP39-212ENST00000465514 COX7B2Q8TF08 81 aa5.67□□□□□ -1.5
USP39-212ENST00000465514 SCGB3A1Q96QR1 104 aa5.67□□□□□ -1.5
USP39-212ENST00000465514 RETNLBQ9BQ08 111 aa5.67□□□□□ -1.5
USP39-212ENST00000465514 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
USP39-212ENST00000465514 TINCRA0A1B0GVN0 87 aa5.66□□□□□ -1.5
USP39-212ENST00000465514 TMEM218A2RU14 115 aa5.66□□□□□ -1.5
USP39-212ENST00000465514 ADCYAP1P18509 176 aa5.66□□□□□ -1.5
USP39-212ENST00000465514 RAB5BP61020 215 aa5.66□□□□□ -1.5
USP39-212ENST00000465514 TPRXLQ17RH7 258 aa5.66□□□□□ -1.5
USP39-212ENST00000465514 KIAA1644Q3SXP7 199 aa5.66□□□□□ -1.5
USP39-212ENST00000465514 KRTAP13-2Q52LG2 175 aa5.66□□□□□ -1.5
USP39-212ENST00000465514 IGLV5-37A0A075B6J1 123 aa5.65□□□□□ -1.5
USP39-212ENST00000465514 UBE2AP49459 152 aa5.65□□□□□ -1.5
USP39-212ENST00000465514 KRTAP13-1Q8IUC0 172 aa5.65□□□□□ -1.5
USP39-212ENST00000465514 NKAPP1Q8N9T2 125 aa5.65□□□□□ -1.5
USP39-212ENST00000465514 IGLV5-45A0A087WSX0 123 aa5.64□□□□□ -1.51
USP39-212ENST00000465514 SPINK8P0C7L1 97 aa5.64□□□□□ -1.51
USP39-212ENST00000465514 C10orf91Q5T1B1 145 aa5.64□□□□□ -1.51
USP39-212ENST00000465514 SEC11CQ9BY50 192 aa5.64□□□□□ -1.51
USP39-212ENST00000465514 CST9LQ9H4G1 147 aa5.64□□□□□ -1.51
USP39-212ENST00000465514 SCO1O75880 301 aa5.63□□□□□ -1.51
USP39-212ENST00000465514 FAM229BQ4G0N7 80 aa5.63□□□□□ -1.51
USP39-212ENST00000465514 IGKV2-28A0A075B6P5 120 aa5.62□□□□□ -1.51
USP39-212ENST00000465514 LINC01546A6NGU7 62 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms