RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 NDUFB1O75438 58 aa2.69□□□□□ -1.98
CCNL1-204ENST00000464316 SCXQ7RTU7 201 aa2.69□□□□□ -1.98
CCNL1-204ENST00000464316 C16orf95Q9H693 158 aa2.69□□□□□ -1.98
CCNL1-204ENST00000464316 FRYQ5TBA9 3013 aa2.69□□□□□ -1.98
CCNL1-204ENST00000464316 A0A1B0GW54 56 aa2.69□□□□□ -1.98
CCNL1-204ENST00000464316 PRR3P79522 188 aaKnown RBP2.69□□□□□ -1.98
CCNL1-204ENST00000464316 MRPL55Q7Z7F7 128 aaKnown RBP2.69□□□□□ -1.98
CCNL1-204ENST00000464316 ZNF843Q8N446 348 aa2.69□□□□□ -1.98
CCNL1-204ENST00000464316 NBASA2RRP1 2371 aa2.69□□□□□ -1.98
CCNL1-204ENST00000464316 C10orf99Q6UWK7 81 aa2.69□□□□□ -1.98
CCNL1-204ENST00000464316 IGHV4-28A0A0C4DH34 117 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 GYPEP15421 78 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 DEFB136Q30KP8 78 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 PRR15Q8IV56 129 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 OTOGLQ3ZCN5 2332 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 NOTCH3Q9UM47 2321 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 USP34Q70CQ2 3546 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 TRIOO75962 3097 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 ANGP03950 147 aaKnown RBP2.68□□□□□ -1.98
CCNL1-204ENST00000464316 SPAG11BQ08648 103 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 LINC00269Q8N2A0 174 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 IL17DQ8TAD2 202 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 CHCHD10Q8WYQ3 142 aaPredicted RBP2.68□□□□□ -1.98
CCNL1-204ENST00000464316 SZT2Q5T011 3432 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 DEFB130BP0DP73 79 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 DEFB130AP0DP74 79 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 NANOS2P60321 138 aaKnown RBP2.68□□□□□ -1.98
CCNL1-204ENST00000464316 PRO0255Q9UI72 69 aa2.68□□□□□ -1.98
CCNL1-204ENST00000464316 RIF1Q5UIP0 2472 aaKnown RBP2.67□□□□□ -1.98
CCNL1-204ENST00000464316 IGHV4-30-2A0A087WSY4 118 aa2.67□□□□□ -1.98
CCNL1-204ENST00000464316 LOC100131303A0A0U1RQF7 123 aa2.67□□□□□ -1.98
CCNL1-204ENST00000464316 A0A1W2PPR1 153 aa2.67□□□□□ -1.98
CCNL1-204ENST00000464316 ZNF73O43830 326 aaPredicted RBP2.67□□□□□ -1.98
CCNL1-204ENST00000464316 MP68P56378 58 aa2.67□□□□□ -1.98
CCNL1-204ENST00000464316 ODF3L2Q3SX64 289 aa2.67□□□□□ -1.98
CCNL1-204ENST00000464316 CLPSL2Q6UWE3 100 aa2.67□□□□□ -1.98
CCNL1-204ENST00000464316 CDSNQ15517 529 aa2.67□□□□□ -1.98
CCNL1-204ENST00000464316 ZNF702PQ9H963 129 aa2.67□□□□□ -1.98
CCNL1-204ENST00000464316 ANK3Q12955 4377 aaKnown RBP2.67□□□□□ -1.98
CCNL1-204ENST00000464316 A0A096LNT2 108 aa2.67□□□□□ -1.98
CCNL1-204ENST00000464316 CD164Q04900 197 aa2.67□□□□□ -1.98
CCNL1-204ENST00000464316 REG3AQ06141 175 aa2.67□□□□□ -1.98
CCNL1-204ENST00000464316 Q6YL49 198 aa2.67□□□□□ -1.98
CCNL1-204ENST00000464316 ZNF469Q96JG9 3925 aaPredicted RBP2.66□□□□□ -1.98
CCNL1-204ENST00000464316 IGLV6-57P01721 117 aa2.66□□□□□ -1.98
CCNL1-204ENST00000464316 IGHV4-31P0DP07 118 aa2.66□□□□□ -1.98
CCNL1-204ENST00000464316 UBE2BP63146 152 aa2.66□□□□□ -1.98
CCNL1-204ENST00000464316 Q1T7F1 81 aa2.66□□□□□ -1.98
CCNL1-204ENST00000464316 TLN1Q9Y490 2541 aaKnown RBP2.66□□□□□ -1.98
CCNL1-204ENST00000464316 DSPP15924 2871 aaKnown RBP2.66□□□□□ -1.98
CCNL1-204ENST00000464316 ETDCA0A1B0GVM5 59 aa2.66□□□□□ -1.98
CCNL1-204ENST00000464316 M0R378 163 aa2.66□□□□□ -1.98
CCNL1-204ENST00000464316 Q6ZRU5 148 aa2.66□□□□□ -1.98
CCNL1-204ENST00000464316 HIGD2AQ9BW72 106 aa2.66□□□□□ -1.98
CCNL1-204ENST00000464316 OCR1Q9BZK8 76 aa2.66□□□□□ -1.98
CCNL1-204ENST00000464316 CSPG4Q6UVK1 2322 aa2.65□□□□□ -1.98
CCNL1-204ENST00000464316 IGLV10-54A0A075B6I4 117 aa2.65□□□□□ -1.98
CCNL1-204ENST00000464316 A0A0J9YWU9 116 aa2.65□□□□□ -1.98
CCNL1-204ENST00000464316 IGHV4-30-4P0DP06 118 aa2.65□□□□□ -1.98
CCNL1-204ENST00000464316 PLA2G2AP14555 144 aa2.65□□□□□ -1.98
CCNL1-204ENST00000464316 ZFHX3Q15911 3703 aa2.65□□□□□ -1.98
CCNL1-204ENST00000464316 hDV103S1A0JD37 113 aa2.65□□□□□ -1.99
CCNL1-204ENST00000464316 AVPP01185 164 aa2.65□□□□□ -1.99
CCNL1-204ENST00000464316 UBE2AP49459 152 aa2.65□□□□□ -1.99
CCNL1-204ENST00000464316 KIAA0087Q14695 138 aa2.65□□□□□ -1.99
CCNL1-204ENST00000464316 PIEZO2Q9H5I5 2752 aa2.65□□□□□ -1.99
CCNL1-204ENST00000464316 VPS13AQ96RL7 3174 aa2.65□□□□□ -1.99
CCNL1-204ENST00000464316 CYSRT1A8MQ03 144 aa2.65□□□□□ -1.99
CCNL1-204ENST00000464316 C9orf116Q5BN46 136 aaPredicted RBP2.65□□□□□ -1.99
CCNL1-204ENST00000464316 UNQ6190/PRO20217Q6UXQ8 127 aa2.65□□□□□ -1.99
CCNL1-204ENST00000464316 LIMD2Q9BT23 127 aa2.65□□□□□ -1.99
CCNL1-204ENST00000464316 FRYLO94915 3013 aa2.65□□□□□ -1.99
CCNL1-204ENST00000464316 ELOF1P60002 83 aaKnown RBP2.64□□□□□ -1.99
CCNL1-204ENST00000464316 Q6ZTC4 211 aa2.64□□□□□ -1.99
CCNL1-204ENST00000464316 LINC01006Q8NI28 216 aa2.64□□□□□ -1.99
CCNL1-204ENST00000464316 SPEGQ15772 3267 aa2.64□□□□□ -1.99
CCNL1-204ENST00000464316 DNAH7Q8WXX0 4024 aa2.64□□□□□ -1.99
CCNL1-204ENST00000464316 IGKV4-1P06312 121 aa2.64□□□□□ -1.99
CCNL1-204ENST00000464316 FAM30AQ9NZY2 134 aa2.64□□□□□ -1.99
CCNL1-204ENST00000464316 GVQW2A0A096LPI5 108 aaPredicted RBP2.64□□□□□ -1.99
CCNL1-204ENST00000464316 M0R2N4 97 aa2.64□□□□□ -1.99
CCNL1-204ENST00000464316 PSPHP1O15172 72 aa2.64□□□□□ -1.99
CCNL1-204ENST00000464316 NDUFS5O43920 106 aa2.64□□□□□ -1.99
CCNL1-204ENST00000464316 PRB1P04280 392 aa2.64□□□□□ -1.99
CCNL1-204ENST00000464316 NKAPP1Q8N9T2 125 aa2.64□□□□□ -1.99
CCNL1-204ENST00000464316 BBC3Q96PG8 261 aaPredicted RBP2.64□□□□□ -1.99
CCNL1-204ENST00000464316 CAMK2N2Q96S95 79 aa2.64□□□□□ -1.99
CCNL1-204ENST00000464316 HUWE1Q7Z6Z7 4374 aaKnown RBP2.63□□□□□ -1.99
CCNL1-204ENST00000464316 A0A096LPF7 62 aa2.63□□□□□ -1.99
CCNL1-204ENST00000464316 LRCOL1A6NCL2 159 aa2.63□□□□□ -1.99
CCNL1-204ENST00000464316 C3orf84H3BNL1 204 aa2.63□□□□□ -1.99
CCNL1-204ENST00000464316 C18orf65Q6ZTR6 163 aa2.63□□□□□ -1.99
CCNL1-204ENST00000464316 Q8N9L7 120 aa2.63□□□□□ -1.99
CCNL1-204ENST00000464316 C1orf64Q8NEQ6 169 aa2.63□□□□□ -1.99
CCNL1-204ENST00000464316 RETNQ9HD89 108 aa2.63□□□□□ -1.99
CCNL1-204ENST00000464316 CHKB-CPT1BH3BT56 60 aa2.63□□□□□ -1.99
CCNL1-204ENST00000464316 XAGE1AQ9HD64 81 aa2.63□□□□□ -1.99
CCNL1-204ENST00000464316 CELA1Q9UNI1 258 aa2.63□□□□□ -1.99
CCNL1-204ENST00000464316 DNAH1Q9P2D7 4330 aa2.63□□□□□ -1.99
CCNL1-204ENST00000464316 EGFEM1PQ0D2K5 195 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms