RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 MEIG1Q5JSS6 88 aa12.69□□□□□ -0.38
CCDC78-206ENST00000463539 PTTG1IPP53801 180 aa12.69□□□□□ -0.38
CCDC78-206ENST00000463539 COL5A1-AS1Q5SY13 56 aa12.69□□□□□ -0.38
CCDC78-206ENST00000463539 RMI2Q96E14 147 aa12.69□□□□□ -0.38
CCDC78-206ENST00000463539 CXCL5P42830 114 aa12.68□□□□□ -0.38
CCDC78-206ENST00000463539 WWC2-AS2Q96NR7 200 aa12.68□□□□□ -0.38
CCDC78-206ENST00000463539 ADAMTSL4-AS1Q5T5F5 129 aa12.67□□□□□ -0.38
CCDC78-206ENST00000463539 A6NDN8 102 aa12.67□□□□□ -0.38
CCDC78-206ENST00000463539 C2orf82Q6UX34 121 aa12.67□□□□□ -0.38
CCDC78-206ENST00000463539 SPANXDQ9BXN6 97 aa12.67□□□□□ -0.38
CCDC78-206ENST00000463539 KRTAP1-5Q9BYS1 174 aa12.67□□□□□ -0.38
CCDC78-206ENST00000463539 SPANXCQ9NY87 97 aa12.67□□□□□ -0.38
CCDC78-206ENST00000463539 Q6ZVH6 145 aa12.66□□□□□ -0.38
CCDC78-206ENST00000463539 A0A0U1RRA0 63 aa12.65□□□□□ -0.38
CCDC78-206ENST00000463539 SMIM13P0DJ93 91 aa12.65□□□□□ -0.39
CCDC78-206ENST00000463539 DAND5Q8N907 189 aa12.64□□□□□ -0.39
CCDC78-206ENST00000463539 DNAH1Q9P2D7 4330 aa12.64□□□□□ -0.39
CCDC78-206ENST00000463539 TMEM238LA0A1B0GVL6 79 aa12.63□□□□□ -0.39
CCDC78-206ENST00000463539 A6NJY4 79 aa12.63□□□□□ -0.39
CCDC78-206ENST00000463539 MUSTN1Q8IVN3 82 aa12.63□□□□□ -0.39
CCDC78-206ENST00000463539 C15orf56Q8N910 161 aa12.63□□□□□ -0.39
CCDC78-206ENST00000463539 LINC00526Q96FQ7 95 aa12.63□□□□□ -0.39
CCDC78-206ENST00000463539 ZNF561-AS1K7EIQ3 104 aa12.62□□□□□ -0.39
CCDC78-206ENST00000463539 HIGD2BQ4VC39 106 aa12.62□□□□□ -0.39
CCDC78-206ENST00000463539 TTC32Q5I0X7 151 aa12.62□□□□□ -0.39
CCDC78-206ENST00000463539 C6orf223Q8N319 242 aa12.62□□□□□ -0.39
CCDC78-206ENST00000463539 NHP2Q9NX24 153 aaKnown RBP12.62□□□□□ -0.39
CCDC78-206ENST00000463539 COX11Q9Y6N1 276 aa12.62□□□□□ -0.39
CCDC78-206ENST00000463539 ERG28Q9UKR5 140 aa12.62□□□□□ -0.39
CCDC78-206ENST00000463539 NPC2P61916 151 aa12.61□□□□□ -0.39
CCDC78-206ENST00000463539 RPL24P83731 157 aaKnown RBP12.61□□□□□ -0.39
CCDC78-206ENST00000463539 NBDYA0A0U1RRE5 68 aa12.6□□□□□ -0.39
CCDC78-206ENST00000463539 IFITM1P13164 125 aa12.6□□□□□ -0.39
CCDC78-206ENST00000463539 LINC00158P58513 81 aa12.6□□□□□ -0.39
CCDC78-206ENST00000463539 NTN5Q8WTR8 489 aaPredicted RBP12.6□□□□□ -0.39
CCDC78-206ENST00000463539 PFN2P35080 140 aa12.6□□□□□ -0.39
CCDC78-206ENST00000463539 GVQW2A0A096LPI5 108 aaPredicted RBP12.59□□□□□ -0.39
CCDC78-206ENST00000463539 UNQ6190/PRO20217Q6UXQ8 127 aa12.59□□□□□ -0.39
CCDC78-206ENST00000463539 K7ERJ3 54 aa12.58□□□□□ -0.4
CCDC78-206ENST00000463539 CASC10Q5T4H9 136 aa12.58□□□□□ -0.4
CCDC78-206ENST00000463539 MIR7-3HGQ8N6C7 128 aa12.58□□□□□ -0.4
CCDC78-206ENST00000463539 LINC00308Q8TCZ7 52 aa12.58□□□□□ -0.4
CCDC78-206ENST00000463539 COPS9Q8WXC6 57 aa12.58□□□□□ -0.4
CCDC78-206ENST00000463539 A4D1N5 150 aa12.58□□□□□ -0.4
CCDC78-206ENST00000463539 C10orf25Q5T742 122 aa12.58□□□□□ -0.4
CCDC78-206ENST00000463539 CAMK2N2Q96S95 79 aa12.57□□□□□ -0.4
CCDC78-206ENST00000463539 COX17Q14061 63 aa12.56□□□□□ -0.4
CCDC78-206ENST00000463539 C2orf48Q96LS8 159 aa12.56□□□□□ -0.4
CCDC78-206ENST00000463539 VPS13DQ5THJ4 4388 aa12.56□□□□□ -0.4
CCDC78-206ENST00000463539 A0A1B0GWB2 263 aa12.55□□□□□ -0.4
CCDC78-206ENST00000463539 USP17L23D6RBM5 183 aa12.55□□□□□ -0.4
CCDC78-206ENST00000463539 TAX1BP3O14907 124 aa12.55□□□□□ -0.4
CCDC78-206ENST00000463539 EIF4EBP3O60516 100 aaPredicted RBP12.55□□□□□ -0.4
CCDC78-206ENST00000463539 C9orf116Q5BN46 136 aaPredicted RBP12.55□□□□□ -0.4
CCDC78-206ENST00000463539 PSCAO43653 123 aa12.54□□□□□ -0.4
CCDC78-206ENST00000463539 RAB37Q96AX2 223 aa12.54□□□□□ -0.4
CCDC78-206ENST00000463539 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.53□□□□□ -0.4
CCDC78-206ENST00000463539 SOSTDC1Q6X4U4 206 aa12.53□□□□□ -0.4
CCDC78-206ENST00000463539 F8WDY8 70 aa12.53□□□□□ -0.4
CCDC78-206ENST00000463539 C3orf84H3BNL1 204 aa12.53□□□□□ -0.4
CCDC78-206ENST00000463539 C6orf48Q9UBA6 75 aa12.53□□□□□ -0.4
CCDC78-206ENST00000463539 TRBV30A0A0K0K1B3 111 aa12.52□□□□□ -0.41
CCDC78-206ENST00000463539 CFC1BP0CG36 223 aa12.52□□□□□ -0.41
CCDC78-206ENST00000463539 CFC1P0CG37 223 aa12.52□□□□□ -0.41
CCDC78-206ENST00000463539 PPDPFQ9H3Y8 114 aa12.52□□□□□ -0.41
CCDC78-206ENST00000463539 LECT2O14960 151 aa12.51□□□□□ -0.41
CCDC78-206ENST00000463539 A0A1B0GV90 55 aa12.51□□□□□ -0.41
CCDC78-206ENST00000463539 Q6ZRU5 148 aa12.51□□□□□ -0.41
CCDC78-206ENST00000463539 M0R2N4 97 aa12.5□□□□□ -0.41
CCDC78-206ENST00000463539 SYCNQ0VAF6 134 aa12.5□□□□□ -0.41
CCDC78-206ENST00000463539 A0A0B4J2C4 111 aa12.49□□□□□ -0.41
CCDC78-206ENST00000463539 LY6G6CO95867 125 aa12.48□□□□□ -0.41
CCDC78-206ENST00000463539 C9orf118A6NHY6 69 aa12.47□□□□□ -0.41
CCDC78-206ENST00000463539 SND1-IT1Q9HBX3 110 aa12.47□□□□□ -0.41
CCDC78-206ENST00000463539 PRO1854Q9UHT4 67 aa12.47□□□□□ -0.41
CCDC78-206ENST00000463539 LINC00476Q8WZB0 136 aa12.46□□□□□ -0.41
CCDC78-206ENST00000463539 CARD19Q96LW7 228 aa12.46□□□□□ -0.41
CCDC78-206ENST00000463539 WFDC2Q14508 124 aa12.46□□□□□ -0.42
CCDC78-206ENST00000463539 PGPEP1Q9NXJ5 209 aa12.46□□□□□ -0.42
CCDC78-206ENST00000463539 H3BUT2 72 aa12.45□□□□□ -0.42
CCDC78-206ENST00000463539 NAA38Q9BRA0 125 aaKnown RBP12.45□□□□□ -0.42
CCDC78-206ENST00000463539 DNAH10Q8IVF4 4471 aa12.44□□□□□ -0.42
CCDC78-206ENST00000463539 Q6ZR54 194 aa12.44□□□□□ -0.42
CCDC78-206ENST00000463539 LOC107984156A0A0G2JMH3 177 aa12.44□□□□□ -0.42
CCDC78-206ENST00000463539 Q6ZRN7 208 aaPredicted RBP12.44□□□□□ -0.42
CCDC78-206ENST00000463539 ARL17AQ8IVW1 177 aa12.44□□□□□ -0.42
CCDC78-206ENST00000463539 SLPIP03973 132 aa12.43□□□□□ -0.42
CCDC78-206ENST00000463539 NDUFC2-KCTD14E9PQ53 114 aa12.42□□□□□ -0.42
CCDC78-206ENST00000463539 C14orf177Q52M58 125 aa12.42□□□□□ -0.42
CCDC78-206ENST00000463539 TSPAN13O95857 204 aa12.41□□□□□ -0.42
CCDC78-206ENST00000463539 RNF151Q2KHN1 245 aa12.41□□□□□ -0.42
CCDC78-206ENST00000463539 H7C2G1 150 aa12.4□□□□□ -0.42
CCDC78-206ENST00000463539 ALMS1Q8TCU4 4167 aa12.39□□□□□ -0.43
CCDC78-206ENST00000463539 A0A1W2PPM0 123 aa12.39□□□□□ -0.43
CCDC78-206ENST00000463539 RPL13AP40429 203 aaKnown RBP12.39□□□□□ -0.43
CCDC78-206ENST00000463539 Q1RN00 199 aa12.39□□□□□ -0.43
CCDC78-206ENST00000463539 XAGE1AQ9HD64 81 aa12.39□□□□□ -0.43
CCDC78-206ENST00000463539 IGKV2-28A0A075B6P5 120 aa12.38□□□□□ -0.43
CCDC78-206ENST00000463539 LRCOL1A6NCL2 159 aa12.38□□□□□ -0.43
CCDC78-206ENST00000463539 IGKV2D-28P01615 120 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms