RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 NHSL1Q5SYE7 1610 aa0.53□□□□□ -2.32
GPNMB-205ENST00000463011 D6R8Y8 96 aa0.53□□□□□ -2.32
GPNMB-205ENST00000463011 K7EP34 96 aa0.53□□□□□ -2.32
GPNMB-205ENST00000463011 HMGN3Q15651 99 aa0.53□□□□□ -2.32
GPNMB-205ENST00000463011 MUSTN1Q8IVN3 82 aa0.53□□□□□ -2.32
GPNMB-205ENST00000463011 C9orf62Q8N4C0 152 aa0.53□□□□□ -2.32
GPNMB-205ENST00000463011 DEFB123Q8N688 67 aa0.53□□□□□ -2.32
GPNMB-205ENST00000463011 ANKRD17O75179 2603 aaKnown RBP0.52□□□□□ -2.33
GPNMB-205ENST00000463011 PEA15Q15121 130 aa0.52□□□□□ -2.33
GPNMB-205ENST00000463011 SETBP1Q9Y6X0 1596 aa0.52□□□□□ -2.33
GPNMB-205ENST00000463011 TARBP1Q13395 1621 aaKnown RBP0.52□□□□□ -2.33
GPNMB-205ENST00000463011 A0A0G2JMZ2 1700 aa0.52□□□□□ -2.33
GPNMB-205ENST00000463011 KMT2DO14686 5537 aa0.52□□□□□ -2.33
GPNMB-205ENST00000463011 TNCP24821 2201 aa0.52□□□□□ -2.33
GPNMB-205ENST00000463011 PVALEFA0A1B0GWK0 134 aa0.51□□□□□ -2.33
GPNMB-205ENST00000463011 BDP1A6H8Y1 2624 aa0.51□□□□□ -2.33
GPNMB-205ENST00000463011 SMIM11AP58511 58 aa0.51□□□□□ -2.33
GPNMB-205ENST00000463011 PYY3Q5JQD4 70 aa0.51□□□□□ -2.33
GPNMB-205ENST00000463011 ABCC3O15438 1527 aa0.5□□□□□ -2.33
GPNMB-205ENST00000463011 COX6B1P14854 86 aa0.5□□□□□ -2.33
GPNMB-205ENST00000463011 S100A16Q96FQ6 103 aaKnown RBP0.5□□□□□ -2.33
GPNMB-205ENST00000463011 PAPPA2Q9BXP8 1791 aa0.5□□□□□ -2.33
GPNMB-205ENST00000463011 POLQO75417 2590 aa0.5□□□□□ -2.33
GPNMB-205ENST00000463011 ABCA12Q86UK0 2595 aa0.5□□□□□ -2.33
GPNMB-205ENST00000463011 MYO3AQ8NEV4 1616 aa0.49□□□□□ -2.33
GPNMB-205ENST00000463011 IQSEC2Q5JU85 1478 aa0.49□□□□□ -2.33
GPNMB-205ENST00000463011 MDN1Q9NU22 5596 aa0.49□□□□□ -2.33
GPNMB-205ENST00000463011 CYB5AP00167 134 aa0.49□□□□□ -2.33
GPNMB-205ENST00000463011 HMGN2P05204 90 aaKnown RBP0.49□□□□□ -2.33
GPNMB-205ENST00000463011 SHPRHQ149N8 1683 aa0.49□□□□□ -2.33
GPNMB-205ENST00000463011 CACNA1CQ13936 2221 aa0.49□□□□□ -2.33
GPNMB-205ENST00000463011 RB1CC1Q8TDY2 1594 aa0.49□□□□□ -2.33
GPNMB-205ENST00000463011 CUX1P39880 1505 aa0.48□□□□□ -2.33
GPNMB-205ENST00000463011 PIEZO1Q92508 2521 aa0.48□□□□□ -2.33
GPNMB-205ENST00000463011 KIAA1551Q9HCM1 1747 aa0.48□□□□□ -2.33
GPNMB-205ENST00000463011 K7EQZ3 153 aa0.48□□□□□ -2.33
GPNMB-205ENST00000463011 DEFB109BQ30KR1 87 aa0.48□□□□□ -2.33
GPNMB-205ENST00000463011 Q5VSD8 79 aa0.48□□□□□ -2.33
GPNMB-205ENST00000463011 ALKAL2Q6UX46 152 aa0.48□□□□□ -2.33
GPNMB-205ENST00000463011 KIAA0556O60303 1618 aa0.48□□□□□ -2.33
GPNMB-205ENST00000463011 TPRP12270 2363 aaKnown RBP0.48□□□□□ -2.33
GPNMB-205ENST00000463011 APCP25054 2843 aa0.47□□□□□ -2.33
GPNMB-205ENST00000463011 C5P01031 1676 aa0.47□□□□□ -2.33
GPNMB-205ENST00000463011 SPRR1AP35321 89 aa0.47□□□□□ -2.33
GPNMB-205ENST00000463011 UBE2D4Q9Y2X8 147 aa0.47□□□□□ -2.33
GPNMB-205ENST00000463011 PPRC1Q5VV67 1664 aaKnown RBP0.46□□□□□ -2.34
GPNMB-205ENST00000463011 PLIN4Q96Q06 1357 aa0.46□□□□□ -2.34
GPNMB-205ENST00000463011 SAMD9Q5K651 1589 aa0.46□□□□□ -2.34
GPNMB-205ENST00000463011 CACNA1EQ15878 2313 aa0.46□□□□□ -2.34
GPNMB-205ENST00000463011 USMG5Q96IX5 58 aa0.46□□□□□ -2.34
GPNMB-205ENST00000463011 SLIT1O75093 1534 aa0.46□□□□□ -2.34
GPNMB-205ENST00000463011 NEXMIFQ5QGS0 1516 aa0.45□□□□□ -2.34
GPNMB-205ENST00000463011 IGLC2P0DOY2 106 aa0.45□□□□□ -2.34
GPNMB-205ENST00000463011 IGLC3P0DOY3 106 aa0.45□□□□□ -2.34
GPNMB-205ENST00000463011 SPRR1BP22528 89 aa0.45□□□□□ -2.34
GPNMB-205ENST00000463011 NMSQ5H8A3 153 aa0.45□□□□□ -2.34
GPNMB-205ENST00000463011 U3KQA8 63 aa0.45□□□□□ -2.34
GPNMB-205ENST00000463011 TENM3Q9P273 2699 aa0.44□□□□□ -2.34
GPNMB-205ENST00000463011 CCDC141Q6ZP82 1450 aa0.44□□□□□ -2.34
GPNMB-205ENST00000463011 CRIPTQ9P021 101 aa0.44□□□□□ -2.34
GPNMB-205ENST00000463011 UBR1Q8IWV7 1749 aa0.44□□□□□ -2.34
GPNMB-205ENST00000463011 ZFHX3Q15911 3703 aa0.43□□□□□ -2.34
GPNMB-205ENST00000463011 RGPD4Q7Z3J3 1758 aa0.43□□□□□ -2.34
GPNMB-205ENST00000463011 IQCF6A8MYZ5 107 aa0.43□□□□□ -2.34
GPNMB-205ENST00000463011 FXYD6Q9H0Q3 95 aa0.43□□□□□ -2.34
GPNMB-205ENST00000463011 CRYBG1Q9Y4K1 1723 aa0.42□□□□□ -2.34
GPNMB-205ENST00000463011 UACAQ9BZF9 1416 aa0.42□□□□□ -2.34
GPNMB-205ENST00000463011 COX8AP10176 69 aa0.42□□□□□ -2.34
GPNMB-205ENST00000463011 SNRPFP62306 86 aaKnown RBP0.42□□□□□ -2.34
GPNMB-205ENST00000463011 PLGLAQ15195 96 aa0.42□□□□□ -2.34
GPNMB-205ENST00000463011 DEFB112Q30KQ8 113 aa0.42□□□□□ -2.34
GPNMB-205ENST00000463011 TDRG1Q3Y452 100 aa0.42□□□□□ -2.34
GPNMB-205ENST00000463011 F8P00451 2351 aa0.41□□□□□ -2.34
GPNMB-205ENST00000463011 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
GPNMB-205ENST00000463011 RABAC1Q9UI14 185 aa0.41□□□□□ -2.34
GPNMB-205ENST00000463011 SYNE1Q8NF91 8797 aaKnown RBP0.41□□□□□ -2.34
GPNMB-205ENST00000463011 SPTBN2O15020 2390 aa0.41□□□□□ -2.34
GPNMB-205ENST00000463011 KIF14Q15058 1648 aa0.41□□□□□ -2.34
GPNMB-205ENST00000463011 AHCTF1Q8WYP5 2266 aa0.4□□□□□ -2.34
GPNMB-205ENST00000463011 RGPD3A6NKT7 1758 aaPredicted RBP0.4□□□□□ -2.35
GPNMB-205ENST00000463011 MYMXA0A1B0GTQ4 84 aa0.4□□□□□ -2.35
GPNMB-205ENST00000463011 LINC00643Q86TS7 51 aa0.4□□□□□ -2.35
GPNMB-205ENST00000463011 LRRC37AA6NMS7 1700 aa0.4□□□□□ -2.35
GPNMB-205ENST00000463011 MED14O60244 1454 aa0.4□□□□□ -2.35
GPNMB-205ENST00000463011 A0A1B0GUT8 65 aa0.39□□□□□ -2.35
GPNMB-205ENST00000463011 I3L3M4 83 aa0.39□□□□□ -2.35
GPNMB-205ENST00000463011 DNAJC13O75165 2243 aa0.39□□□□□ -2.35
GPNMB-205ENST00000463011 NKTRP30414 1462 aaKnown RBP0.39□□□□□ -2.35
GPNMB-205ENST00000463011 C2CD3Q4AC94 2353 aa0.39□□□□□ -2.35
GPNMB-205ENST00000463011 ALKQ9UM73 1620 aa0.38□□□□□ -2.35
GPNMB-205ENST00000463011 ATP7BP35670 1465 aa0.38□□□□□ -2.35
GPNMB-205ENST00000463011 CCDC18Q5T9S5 1454 aa0.38□□□□□ -2.35
GPNMB-205ENST00000463011 CPSF4LA6NMK7 179 aaKnown RBP0.38□□□□□ -2.35
GPNMB-205ENST00000463011 DEFB105AQ8NG35 78 aa0.38□□□□□ -2.35
GPNMB-205ENST00000463011 CELSR2Q9HCU4 2923 aa0.38□□□□□ -2.35
GPNMB-205ENST00000463011 MUC2Q02817 5179 aa0.37□□□□□ -2.35
GPNMB-205ENST00000463011 MYH4Q9Y623 1939 aa0.37□□□□□ -2.35
GPNMB-205ENST00000463011 TSC2P49815 1807 aa0.37□□□□□ -2.35
GPNMB-205ENST00000463011 SPTY2D1-AS1A0A0U1RR47 76 aa0.37□□□□□ -2.35
GPNMB-205ENST00000463011 KLK9Q2XQG4 91 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms