RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 C6orf226Q5I0X4 101 aa12.83□□□□□ -0.36
HPS3-204ENST00000462030 SS18Q15532 418 aa12.82□□□□□ -0.36
HPS3-204ENST00000462030 A0A087WVE0 104 aa12.82□□□□□ -0.36
HPS3-204ENST00000462030 LY6G6DO95868 133 aa12.82□□□□□ -0.36
HPS3-204ENST00000462030 XCL1P47992 114 aa12.82□□□□□ -0.36
HPS3-204ENST00000462030 Q6JHZ5 121 aa12.82□□□□□ -0.36
HPS3-204ENST00000462030 TMEM86BQ8N661 226 aa12.82□□□□□ -0.36
HPS3-204ENST00000462030 ESM1Q9NQ30 184 aa12.82□□□□□ -0.36
HPS3-204ENST00000462030 BBC3Q96PG8 261 aaPredicted RBP12.81□□□□□ -0.36
HPS3-204ENST00000462030 RPL18AQ02543 176 aaKnown RBP12.8□□□□□ -0.36
HPS3-204ENST00000462030 CLPSL2Q6UWE3 100 aa12.8□□□□□ -0.36
HPS3-204ENST00000462030 UBR5O95071 2799 aaPredicted RBP12.8□□□□□ -0.36
HPS3-204ENST00000462030 KRTAP1-3Q8IUG1 177 aa12.79□□□□□ -0.36
HPS3-204ENST00000462030 CYSTM1Q9H1C7 97 aa12.79□□□□□ -0.36
HPS3-204ENST00000462030 ORMDL1Q9P0S3 153 aa12.79□□□□□ -0.36
HPS3-204ENST00000462030 CRYGAP11844 174 aa12.79□□□□□ -0.36
HPS3-204ENST00000462030 hADV29S1A0JD25 119 aa12.78□□□□□ -0.36
HPS3-204ENST00000462030 DEFB130BP0DP73 79 aa12.78□□□□□ -0.36
HPS3-204ENST00000462030 DEFB130AP0DP74 79 aa12.78□□□□□ -0.36
HPS3-204ENST00000462030 PRR3P79522 188 aaKnown RBP12.78□□□□□ -0.36
HPS3-204ENST00000462030 CCDC168Q8NDH2 2452 aa12.78□□□□□ -0.36
HPS3-204ENST00000462030 A0A1B0GX51 115 aa12.78□□□□□ -0.36
HPS3-204ENST00000462030 CFAP161Q6P656 301 aa12.78□□□□□ -0.36
HPS3-204ENST00000462030 LOC107984640A0A0U1RRK4 108 aa12.77□□□□□ -0.37
HPS3-204ENST00000462030 CMC4P56277 68 aaPredicted RBP12.77□□□□□ -0.37
HPS3-204ENST00000462030 ITPR3Q14573 2671 aa12.77□□□□□ -0.37
HPS3-204ENST00000462030 IGLV1-51P01701 117 aa12.77□□□□□ -0.37
HPS3-204ENST00000462030 NANOS2P60321 138 aaKnown RBP12.77□□□□□ -0.37
HPS3-204ENST00000462030 LINC01561Q8N1V8 128 aa12.77□□□□□ -0.37
HPS3-204ENST00000462030 APCP25054 2843 aa12.75□□□□□ -0.37
HPS3-204ENST00000462030 GYPEP15421 78 aa12.75□□□□□ -0.37
HPS3-204ENST00000462030 Q8IZM0 81 aa12.75□□□□□ -0.37
HPS3-204ENST00000462030 FN1P02751 2386 aaKnown RBP12.74□□□□□ -0.37
HPS3-204ENST00000462030 A0A096LPF7 62 aa12.73□□□□□ -0.37
HPS3-204ENST00000462030 CCKP06307 115 aa12.73□□□□□ -0.37
HPS3-204ENST00000462030 LINC00167Q96N53 147 aa12.73□□□□□ -0.37
HPS3-204ENST00000462030 LINC01006Q8NI28 216 aa12.72□□□□□ -0.37
HPS3-204ENST00000462030 USP17L23D6RBM5 183 aa12.71□□□□□ -0.37
HPS3-204ENST00000462030 Q8N814 137 aa12.71□□□□□ -0.37
HPS3-204ENST00000462030 SERP2Q8N6R1 65 aa12.7□□□□□ -0.38
HPS3-204ENST00000462030 ZNF843Q8N446 348 aa12.7□□□□□ -0.38
HPS3-204ENST00000462030 WFDC11Q8NEX6 87 aa12.7□□□□□ -0.38
HPS3-204ENST00000462030 FLNAP21333 2647 aaKnown RBP12.69□□□□□ -0.38
HPS3-204ENST00000462030 A0A1B0GUV1 79 aa12.69□□□□□ -0.38
HPS3-204ENST00000462030 UPK3BQ9BT76 320 aa12.69□□□□□ -0.38
HPS3-204ENST00000462030 HILS1P60008 231 aa12.68□□□□□ -0.38
HPS3-204ENST00000462030 J3KT08 172 aa12.68□□□□□ -0.38
HPS3-204ENST00000462030 C9orf116Q5BN46 136 aaPredicted RBP12.68□□□□□ -0.38
HPS3-204ENST00000462030 WFDC9Q8NEX5 89 aa12.68□□□□□ -0.38
HPS3-204ENST00000462030 KIR2DL5BQ8NHK3 375 aa12.68□□□□□ -0.38
HPS3-204ENST00000462030 KIAA0087Q14695 138 aa12.67□□□□□ -0.38
HPS3-204ENST00000462030 Q8NDZ9 215 aa12.67□□□□□ -0.38
HPS3-204ENST00000462030 JMJD7-PLA2G4BH0Y9G9 81 aa12.66□□□□□ -0.38
HPS3-204ENST00000462030 LINC00612Q8N6U2 182 aa12.66□□□□□ -0.38
HPS3-204ENST00000462030 Q8N3U1 123 aa12.66□□□□□ -0.38
HPS3-204ENST00000462030 IGLV10-54A0A075B6I4 117 aa12.65□□□□□ -0.38
HPS3-204ENST00000462030 LINC00269Q8N2A0 174 aa12.65□□□□□ -0.38
HPS3-204ENST00000462030 TMEM256-PLSCR3K7ERE1 68 aa12.65□□□□□ -0.38
HPS3-204ENST00000462030 NDUFC2O95298 119 aa12.65□□□□□ -0.38
HPS3-204ENST00000462030 ACANP16112 2415 aa12.65□□□□□ -0.39
HPS3-204ENST00000462030 RNASE1P07998 156 aaKnown RBP12.64□□□□□ -0.39
HPS3-204ENST00000462030 C6orf99Q4VX62 202 aa12.64□□□□□ -0.39
HPS3-204ENST00000462030 GCN1Q92616 2671 aaKnown RBP12.64□□□□□ -0.39
HPS3-204ENST00000462030 MTORP42345 2549 aa12.63□□□□□ -0.39
HPS3-204ENST00000462030 CD164L2Q6UWJ8 174 aa12.62□□□□□ -0.39
HPS3-204ENST00000462030 FAM19A5Q7Z5A7 132 aaPredicted RBP12.62□□□□□ -0.39
HPS3-204ENST00000462030 FAM19A1Q7Z5A9 133 aa12.62□□□□□ -0.39
HPS3-204ENST00000462030 CHCHD10Q8WYQ3 142 aaPredicted RBP12.62□□□□□ -0.39
HPS3-204ENST00000462030 PRO0255Q9UI72 69 aa12.62□□□□□ -0.39
HPS3-204ENST00000462030 NBEAL2Q6ZNJ1 2754 aa12.61□□□□□ -0.39
HPS3-204ENST00000462030 COX17Q14061 63 aa12.61□□□□□ -0.39
HPS3-204ENST00000462030 S100A7L2Q5SY68 101 aa12.61□□□□□ -0.39
HPS3-204ENST00000462030 C16orf95Q9H693 158 aa12.61□□□□□ -0.39
HPS3-204ENST00000462030 X6R8D5 127 aa12.61□□□□□ -0.39
HPS3-204ENST00000462030 TRAV23DV6A0A075B6W5 121 aa12.6□□□□□ -0.39
HPS3-204ENST00000462030 ENHOQ6UWT2 76 aa12.6□□□□□ -0.39
HPS3-204ENST00000462030 TMEM258P61165 79 aa12.6□□□□□ -0.39
HPS3-204ENST00000462030 GHRHP01286 108 aa12.59□□□□□ -0.39
HPS3-204ENST00000462030 ANGP03950 147 aaKnown RBP12.59□□□□□ -0.39
HPS3-204ENST00000462030 ANK3Q12955 4377 aaKnown RBP12.58□□□□□ -0.4
HPS3-204ENST00000462030 IGHV4-28A0A0C4DH34 117 aa12.58□□□□□ -0.4
HPS3-204ENST00000462030 ATP5EP2Q5VTU8 51 aa12.58□□□□□ -0.4
HPS3-204ENST00000462030 RPS28P62857 69 aaKnown RBP12.57□□□□□ -0.4
HPS3-204ENST00000462030 REG3AQ06141 175 aa12.57□□□□□ -0.4
HPS3-204ENST00000462030 LYPD5Q6UWN5 251 aa12.57□□□□□ -0.4
HPS3-204ENST00000462030 LINC00575Q6W349 94 aa12.57□□□□□ -0.4
HPS3-204ENST00000462030 DPH3Q96FX2 82 aa12.57□□□□□ -0.4
HPS3-204ENST00000462030 DSCR8Q96T75 97 aa12.56□□□□□ -0.4
HPS3-204ENST00000462030 C10orf25Q5T742 122 aa12.56□□□□□ -0.4
HPS3-204ENST00000462030 DEFB4AO15263 64 aa12.55□□□□□ -0.4
HPS3-204ENST00000462030 C6orf223Q8N319 242 aa12.55□□□□□ -0.4
HPS3-204ENST00000462030 KRTAP1-1Q07627 177 aa12.55□□□□□ -0.4
HPS3-204ENST00000462030 UBL5Q9BZL1 73 aa12.55□□□□□ -0.4
HPS3-204ENST00000462030 M0R2N4 97 aa12.54□□□□□ -0.4
HPS3-204ENST00000462030 OXTP01178 125 aa12.53□□□□□ -0.4
HPS3-204ENST00000462030 UNQ6190/PRO20217Q6UXQ8 127 aa12.53□□□□□ -0.4
HPS3-204ENST00000462030 Q6ZQT0 140 aa12.53□□□□□ -0.4
HPS3-204ENST00000462030 SPATA3Q8NHX4 192 aa12.52□□□□□ -0.4
HPS3-204ENST00000462030 RBM3P98179 157 aaKnown RBP12.51□□□□□ -0.41
HPS3-204ENST00000462030 LINC00482Q8N8I6 264 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 340.9 ms