RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 TRBV7-7A0A0K0K1E9 115 aa8.69□□□□□ -1.02
COL4A6-204ENST00000461897 UBE2L6O14933 153 aa8.68□□□□□ -1.02
COL4A6-204ENST00000461897 GAGE6Q13070 117 aa8.68□□□□□ -1.02
COL4A6-204ENST00000461897 TRAV13-2A0A0B4J235 113 aa8.68□□□□□ -1.02
COL4A6-204ENST00000461897 RPL28P46779 137 aaKnown RBP8.68□□□□□ -1.02
COL4A6-204ENST00000461897 TTC32Q5I0X7 151 aa8.68□□□□□ -1.02
COL4A6-204ENST00000461897 COX7B2Q8TF08 81 aa8.67□□□□□ -1.02
COL4A6-204ENST00000461897 IGHV4-28A0A0C4DH34 117 aa8.66□□□□□ -1.02
COL4A6-204ENST00000461897 DEFB130BP0DP73 79 aa8.66□□□□□ -1.02
COL4A6-204ENST00000461897 DEFB130AP0DP74 79 aa8.66□□□□□ -1.02
COL4A6-204ENST00000461897 FHL2Q14192 279 aa8.66□□□□□ -1.02
COL4A6-204ENST00000461897 SDIM1Q6ZPB5 146 aa8.66□□□□□ -1.02
COL4A6-204ENST00000461897 Q8NAQ8 132 aa8.66□□□□□ -1.02
COL4A6-204ENST00000461897 A0A0U1RRA0 63 aa8.66□□□□□ -1.02
COL4A6-204ENST00000461897 DEFB4AO15263 64 aa8.66□□□□□ -1.02
COL4A6-204ENST00000461897 IMUPQ9GZP8 106 aa8.66□□□□□ -1.02
COL4A6-204ENST00000461897 IGHV3OR16-9A0A0B4J2B5 98 aa8.65□□□□□ -1.02
COL4A6-204ENST00000461897 TRGV4A0A0C4DH28 118 aa8.65□□□□□ -1.02
COL4A6-204ENST00000461897 LOC100131303A0A0U1RQF7 123 aa8.65□□□□□ -1.02
COL4A6-204ENST00000461897 C22orf24Q9Y442 160 aa8.65□□□□□ -1.02
COL4A6-204ENST00000461897 TRBV6-8A0A0A6YYG3 113 aa8.64□□□□□ -1.03
COL4A6-204ENST00000461897 LYRM9A8MSI8 78 aa8.64□□□□□ -1.03
COL4A6-204ENST00000461897 MIFP14174 115 aa8.64□□□□□ -1.03
COL4A6-204ENST00000461897 FAM218AQ96MZ4 157 aa8.64□□□□□ -1.03
COL4A6-204ENST00000461897 IGKV2-28A0A075B6P5 120 aa8.63□□□□□ -1.03
COL4A6-204ENST00000461897 A0A087WZ39 114 aa8.63□□□□□ -1.03
COL4A6-204ENST00000461897 IBA57-AS1B1ANH7 110 aa8.63□□□□□ -1.03
COL4A6-204ENST00000461897 IGKV2D-28P01615 120 aa8.63□□□□□ -1.03
COL4A6-204ENST00000461897 CRPP02741 224 aa8.63□□□□□ -1.03
COL4A6-204ENST00000461897 BAALC-AS2P0C853 105 aa8.63□□□□□ -1.03
COL4A6-204ENST00000461897 CELA1Q9UNI1 258 aa8.63□□□□□ -1.03
COL4A6-204ENST00000461897 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
COL4A6-204ENST00000461897 LINC00337Q8N6G1 96 aa8.62□□□□□ -1.03
COL4A6-204ENST00000461897 NOTCH1P46531 2555 aa8.62□□□□□ -1.03
COL4A6-204ENST00000461897 MDFIQ99750 246 aa8.62□□□□□ -1.03
COL4A6-204ENST00000461897 SND1-IT1Q9HBX3 110 aa8.62□□□□□ -1.03
COL4A6-204ENST00000461897 IGLV4-60A0A075B6I1 120 aa8.61□□□□□ -1.03
COL4A6-204ENST00000461897 INAFM2P0DMQ5 153 aa8.61□□□□□ -1.03
COL4A6-204ENST00000461897 LINC00643Q86TS7 51 aa8.61□□□□□ -1.03
COL4A6-204ENST00000461897 RETNQ9HD89 108 aa8.61□□□□□ -1.03
COL4A6-204ENST00000461897 NBEAL1Q6ZS30 2694 aa8.6□□□□□ -1.03
COL4A6-204ENST00000461897 H0YGX0 51 aa8.59□□□□□ -1.03
COL4A6-204ENST00000461897 CCDC179H3BU77 68 aa8.59□□□□□ -1.03
COL4A6-204ENST00000461897 CCL18P55774 89 aa8.59□□□□□ -1.03
COL4A6-204ENST00000461897 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
COL4A6-204ENST00000461897 B5MCH6 92 aa8.58□□□□□ -1.04
COL4A6-204ENST00000461897 MALP21145 153 aa8.58□□□□□ -1.04
COL4A6-204ENST00000461897 DAD1P61803 113 aa8.58□□□□□ -1.04
COL4A6-204ENST00000461897 SMCR5Q8TEV8 140 aa8.58□□□□□ -1.04
COL4A6-204ENST00000461897 HUWE1Q7Z6Z7 4374 aaKnown RBP8.57□□□□□ -1.04
COL4A6-204ENST00000461897 A0A1B0GUV1 79 aa8.57□□□□□ -1.04
COL4A6-204ENST00000461897 SPART-AS1P0CW21 52 aa8.57□□□□□ -1.04
COL4A6-204ENST00000461897 LINC00158P58513 81 aa8.57□□□□□ -1.04
COL4A6-204ENST00000461897 SMIM11BQ8TCY0 68 aa8.57□□□□□ -1.04
COL4A6-204ENST00000461897 OBSCN-AS1Q96MR7 158 aa8.57□□□□□ -1.04
COL4A6-204ENST00000461897 CHCHD5Q9BSY4 110 aa8.57□□□□□ -1.04
COL4A6-204ENST00000461897 PRO0255Q9UI72 69 aa8.57□□□□□ -1.04
COL4A6-204ENST00000461897 LINC00959A0A1B0GUT2 108 aa8.57□□□□□ -1.04
COL4A6-204ENST00000461897 TOMM7Q9P0U1 55 aa8.57□□□□□ -1.04
COL4A6-204ENST00000461897 PRB2P02812 416 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-204ENST00000461897 GYPEP15421 78 aa8.56□□□□□ -1.04
COL4A6-204ENST00000461897 CXCL5P42830 114 aa8.56□□□□□ -1.04
COL4A6-204ENST00000461897 TENM3Q9P273 2699 aa8.56□□□□□ -1.04
COL4A6-204ENST00000461897 ATP5G1P05496 136 aa8.55□□□□□ -1.04
COL4A6-204ENST00000461897 C5orf38Q86SI9 138 aa8.55□□□□□ -1.04
COL4A6-204ENST00000461897 PAX4O43316 350 aa8.54□□□□□ -1.04
COL4A6-204ENST00000461897 Q8IZM0 81 aa8.54□□□□□ -1.04
COL4A6-204ENST00000461897 Q9HAA7 133 aa8.54□□□□□ -1.04
COL4A6-204ENST00000461897 SS18L2Q9UHA2 77 aa8.54□□□□□ -1.04
COL4A6-204ENST00000461897 MGAM2Q2M2H8 2515 aa8.54□□□□□ -1.04
COL4A6-204ENST00000461897 DNHD1Q96M86 4753 aa8.54□□□□□ -1.04
COL4A6-204ENST00000461897 A0A087WYN8 130 aa8.53□□□□□ -1.04
COL4A6-204ENST00000461897 IGKV3OR2-268A0A0C4DH90 116 aa8.53□□□□□ -1.04
COL4A6-204ENST00000461897 K7EIL1 84 aa8.53□□□□□ -1.04
COL4A6-204ENST00000461897 DNAL4O96015 105 aa8.53□□□□□ -1.04
COL4A6-204ENST00000461897 KPRPQ5T749 579 aaPredicted RBP8.53□□□□□ -1.04
COL4A6-204ENST00000461897 C11orf68Q9H3H3 251 aaKnown RBP8.53□□□□□ -1.04
COL4A6-204ENST00000461897 SS18Q15532 418 aa8.52□□□□□ -1.05
COL4A6-204ENST00000461897 A0A096LPF7 62 aa8.51□□□□□ -1.05
COL4A6-204ENST00000461897 FAM236AA0A1B0GUQ0 79 aa8.51□□□□□ -1.05
COL4A6-204ENST00000461897 FAM236BA0A1B0GV22 79 aa8.51□□□□□ -1.05
COL4A6-204ENST00000461897 HTN3P15516 51 aa8.51□□□□□ -1.05
COL4A6-204ENST00000461897 LINC00167Q96N53 147 aa8.51□□□□□ -1.05
COL4A6-204ENST00000461897 A0A1B0GX51 115 aa8.51□□□□□ -1.05
COL4A6-204ENST00000461897 C6orf226Q5I0X4 101 aa8.51□□□□□ -1.05
COL4A6-204ENST00000461897 DNAH9Q9NYC9 4486 aa8.5□□□□□ -1.05
COL4A6-204ENST00000461897 PFN2P35080 140 aa8.5□□□□□ -1.05
COL4A6-204ENST00000461897 KLK5Q9Y337 293 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-204ENST00000461897 A0A0J9YWU9 116 aa8.49□□□□□ -1.05
COL4A6-204ENST00000461897 GAGE2AQ6NT46 116 aa8.49□□□□□ -1.05
COL4A6-204ENST00000461897 SVIPQ8NHG7 77 aa8.49□□□□□ -1.05
COL4A6-204ENST00000461897 NDUFC2O95298 119 aa8.49□□□□□ -1.05
COL4A6-204ENST00000461897 HIST1H4AP62805 103 aaKnown RBP8.49□□□□□ -1.05
COL4A6-204ENST00000461897 COX17Q14061 63 aa8.49□□□□□ -1.05
COL4A6-204ENST00000461897 Q6ZTC4 211 aa8.48□□□□□ -1.05
COL4A6-204ENST00000461897 LECT2O14960 151 aa8.47□□□□□ -1.05
COL4A6-204ENST00000461897 XCL1P47992 114 aa8.47□□□□□ -1.05
COL4A6-204ENST00000461897 KIAA0087Q14695 138 aa8.47□□□□□ -1.05
COL4A6-204ENST00000461897 C9orf129Q5T035 196 aaKnown RBP8.47□□□□□ -1.05
COL4A6-204ENST00000461897 TM2D3Q9BRN9 247 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms