RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 MAST4O15021 2626 aa5.04□□□□□ -1.6
NPHP1-209ENST00000461707 IGKV2-28A0A075B6P5 120 aa5.04□□□□□ -1.6
NPHP1-209ENST00000461707 IGKV2D-28P01615 120 aa5.04□□□□□ -1.6
NPHP1-209ENST00000461707 XCL1P47992 114 aa5.04□□□□□ -1.6
NPHP1-209ENST00000461707 MEIG1Q5JSS6 88 aa5.04□□□□□ -1.6
NPHP1-209ENST00000461707 IGLV10-54A0A075B6I4 117 aa5.04□□□□□ -1.6
NPHP1-209ENST00000461707 MIR7-3HGQ8N6C7 128 aa5.04□□□□□ -1.6
NPHP1-209ENST00000461707 LINC00337Q8N6G1 96 aa5.04□□□□□ -1.6
NPHP1-209ENST00000461707 TMEM262E9PQX1 116 aa5.03□□□□□ -1.6
NPHP1-209ENST00000461707 PFN2P35080 140 aa5.03□□□□□ -1.6
NPHP1-209ENST00000461707 PRR3P79522 188 aaKnown RBP5.03□□□□□ -1.6
NPHP1-209ENST00000461707 TRAV8-4A0A0B4J246 113 aa5.03□□□□□ -1.6
NPHP1-209ENST00000461707 LINC00959A0A1B0GUT2 108 aa5.03□□□□□ -1.6
NPHP1-209ENST00000461707 CIDEAO60543 219 aa5.03□□□□□ -1.6
NPHP1-209ENST00000461707 TIMM17BO60830 172 aa5.03□□□□□ -1.6
NPHP1-209ENST00000461707 PPDPFLQ8WWR9 84 aa5.03□□□□□ -1.6
NPHP1-209ENST00000461707 NOTCH1P46531 2555 aa5.03□□□□□ -1.6
NPHP1-209ENST00000461707 IGHV4-28A0A0C4DH34 117 aa5.03□□□□□ -1.6
NPHP1-209ENST00000461707 ATP6V0E2Q8NHE4 81 aa5.03□□□□□ -1.6
NPHP1-209ENST00000461707 COX7B2Q8TF08 81 aa5.03□□□□□ -1.6
NPHP1-209ENST00000461707 LINC00526Q96FQ7 95 aa5.03□□□□□ -1.6
NPHP1-209ENST00000461707 ATXN8Q156A1 80 aa5.02□□□□□ -1.61
NPHP1-209ENST00000461707 C9orf129Q5T035 196 aaKnown RBP5.02□□□□□ -1.61
NPHP1-209ENST00000461707 C9orf116Q5BN46 136 aaPredicted RBP5.02□□□□□ -1.61
NPHP1-209ENST00000461707 Q8NDZ9 215 aa5.02□□□□□ -1.61
NPHP1-209ENST00000461707 KIR2DL5BQ8NHK3 375 aa5.02□□□□□ -1.61
NPHP1-209ENST00000461707 RETNQ9HD89 108 aa5.02□□□□□ -1.61
NPHP1-209ENST00000461707 VPS13BQ7Z7G8 4022 aa5.01□□□□□ -1.61
NPHP1-209ENST00000461707 LST1O00453 97 aa5.01□□□□□ -1.61
NPHP1-209ENST00000461707 CMC4P56277 68 aaPredicted RBP5.01□□□□□ -1.61
NPHP1-209ENST00000461707 LINC00269Q8N2A0 174 aa5.01□□□□□ -1.61
NPHP1-209ENST00000461707 TRAV26-1A0A087WT03 109 aa5.01□□□□□ -1.61
NPHP1-209ENST00000461707 TRBV10-2A0A0K0K1G8 114 aa5.01□□□□□ -1.61
NPHP1-209ENST00000461707 HTN3P15516 51 aa5.01□□□□□ -1.61
NPHP1-209ENST00000461707 OXLD1Q5BKU9 147 aa5.01□□□□□ -1.61
NPHP1-209ENST00000461707 Q9HAA7 133 aa5.01□□□□□ -1.61
NPHP1-209ENST00000461707 CCL18P55774 89 aa5.01□□□□□ -1.61
NPHP1-209ENST00000461707 SACSQ9NZJ4 4579 aa5.01□□□□□ -1.61
NPHP1-209ENST00000461707 A0A087WZ39 114 aa5□□□□□ -1.61
NPHP1-209ENST00000461707 Q8NAQ8 132 aa5□□□□□ -1.61
NPHP1-209ENST00000461707 CITED1Q99966 193 aa5□□□□□ -1.61
NPHP1-209ENST00000461707 IFITM1P13164 125 aa5□□□□□ -1.61
NPHP1-209ENST00000461707 LINC00158P58513 81 aa5□□□□□ -1.61
NPHP1-209ENST00000461707 CIRBPQ14011 172 aaKnown RBP5□□□□□ -1.61
NPHP1-209ENST00000461707 PAX4O43316 350 aa5□□□□□ -1.61
NPHP1-209ENST00000461707 LYRM7Q5U5X0 104 aa5□□□□□ -1.61
NPHP1-209ENST00000461707 OBSCN-AS1Q96MR7 158 aa5□□□□□ -1.61
NPHP1-209ENST00000461707 J3QR89 54 aa4.99□□□□□ -1.61
NPHP1-209ENST00000461707 PRO0255Q9UI72 69 aa4.99□□□□□ -1.61
NPHP1-209ENST00000461707 IGHV4-30-4P0DP06 118 aa4.99□□□□□ -1.61
NPHP1-209ENST00000461707 KRTAP10-11P60412 298 aa4.99□□□□□ -1.61
NPHP1-209ENST00000461707 C6orf223Q8N319 242 aa4.99□□□□□ -1.61
NPHP1-209ENST00000461707 A0A087WYN8 130 aa4.99□□□□□ -1.61
NPHP1-209ENST00000461707 ATP5G1P05496 136 aa4.99□□□□□ -1.61
NPHP1-209ENST00000461707 NBEAL1Q6ZS30 2694 aa4.98□□□□□ -1.61
NPHP1-209ENST00000461707 LINC01561Q8N1V8 128 aa4.98□□□□□ -1.61
NPHP1-209ENST00000461707 SND1-IT1Q9HBX3 110 aa4.98□□□□□ -1.61
NPHP1-209ENST00000461707 C9orf66Q5T8R8 295 aa4.98□□□□□ -1.61
NPHP1-209ENST00000461707 SMIM11BQ8TCY0 68 aa4.98□□□□□ -1.61
NPHP1-209ENST00000461707 A0A1B0GV72 72 aa4.98□□□□□ -1.61
NPHP1-209ENST00000461707 C10orf25Q5T742 122 aa4.98□□□□□ -1.61
NPHP1-209ENST00000461707 KIAA0087Q14695 138 aa4.97□□□□□ -1.61
NPHP1-209ENST00000461707 LINC00167Q96N53 147 aa4.97□□□□□ -1.61
NPHP1-209ENST00000461707 COX7A2LO14548 114 aa4.97□□□□□ -1.61
NPHP1-209ENST00000461707 ANGP03950 147 aaKnown RBP4.97□□□□□ -1.61
NPHP1-209ENST00000461707 SLPIP03973 132 aa4.97□□□□□ -1.61
NPHP1-209ENST00000461707 C6orf226Q5I0X4 101 aa4.97□□□□□ -1.61
NPHP1-209ENST00000461707 KRTAP26-1Q6PEX3 210 aa4.97□□□□□ -1.61
NPHP1-209ENST00000461707 UBE2WQ96B02 151 aa4.97□□□□□ -1.61
NPHP1-209ENST00000461707 HERV-K104P63124 156 aa4.96□□□□□ -1.61
NPHP1-209ENST00000461707 TTC32Q5I0X7 151 aa4.96□□□□□ -1.61
NPHP1-209ENST00000461707 COL6A5A8TX70 2615 aa4.96□□□□□ -1.62
NPHP1-209ENST00000461707 CYSRT1A8MQ03 144 aa4.96□□□□□ -1.62
NPHP1-209ENST00000461707 DAD1P61803 113 aa4.96□□□□□ -1.62
NPHP1-209ENST00000461707 A0A1B0GUV1 79 aa4.96□□□□□ -1.62
NPHP1-209ENST00000461707 COX6CP09669 75 aa4.96□□□□□ -1.62
NPHP1-209ENST00000461707 CHCHD10Q8WYQ3 142 aaPredicted RBP4.96□□□□□ -1.62
NPHP1-209ENST00000461707 NANOS2P60321 138 aaKnown RBP4.95□□□□□ -1.62
NPHP1-209ENST00000461707 SMCR5Q8TEV8 140 aa4.95□□□□□ -1.62
NPHP1-209ENST00000461707 REG3AQ06141 175 aa4.95□□□□□ -1.62
NPHP1-209ENST00000461707 SMIM9A6NGZ8 99 aa4.95□□□□□ -1.62
NPHP1-209ENST00000461707 LYRM9A8MSI8 78 aa4.94□□□□□ -1.62
NPHP1-209ENST00000461707 PRB2P02812 416 aaPredicted RBP4.94□□□□□ -1.62
NPHP1-209ENST00000461707 UNQ6190/PRO20217Q6UXQ8 127 aa4.94□□□□□ -1.62
NPHP1-209ENST00000461707 WFDC9Q8NEX5 89 aa4.94□□□□□ -1.62
NPHP1-209ENST00000461707 BAALC-AS2P0C853 105 aa4.94□□□□□ -1.62
NPHP1-209ENST00000461707 SS18Q15532 418 aa4.94□□□□□ -1.62
NPHP1-209ENST00000461707 ENHOQ6UWT2 76 aa4.94□□□□□ -1.62
NPHP1-209ENST00000461707 KLK12Q9UKR0 248 aa4.94□□□□□ -1.62
NPHP1-209ENST00000461707 BAHCC1Q9P281 2608 aa4.94□□□□□ -1.62
NPHP1-209ENST00000461707 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
NPHP1-209ENST00000461707 IBA57-AS1B1ANH7 110 aa4.93□□□□□ -1.62
NPHP1-209ENST00000461707 H3BT86 120 aa4.93□□□□□ -1.62
NPHP1-209ENST00000461707 RPL28P46779 137 aaKnown RBP4.93□□□□□ -1.62
NPHP1-209ENST00000461707 OR13C6PQ8NH95 151 aa4.93□□□□□ -1.62
NPHP1-209ENST00000461707 CRPP02741 224 aa4.93□□□□□ -1.62
NPHP1-209ENST00000461707 NHLRC4P0CG21 123 aaPredicted RBP4.93□□□□□ -1.62
NPHP1-209ENST00000461707 KRTAP24-1Q3LI83 254 aa4.93□□□□□ -1.62
NPHP1-209ENST00000461707 C15orf53Q8NAA6 179 aa4.93□□□□□ -1.62
NPHP1-209ENST00000461707 CKS1BP61024 79 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms