RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 MT-ND4LP03901 98 aa8.73□□□□□ -1.01
SMPD4-216ENST00000461187 HERVK_113P63121 156 aa8.73□□□□□ -1.01
SMPD4-216ENST00000461187 PNRC1Q12796 327 aaPredicted RBP8.73□□□□□ -1.01
SMPD4-216ENST00000461187 F8VRH5 84 aa8.72□□□□□ -1.01
SMPD4-216ENST00000461187 SEC11AP67812 179 aa8.72□□□□□ -1.01
SMPD4-216ENST00000461187 LBHQ53QV2 105 aaPredicted RBP8.72□□□□□ -1.01
SMPD4-216ENST00000461187 CTDSP1Q9GZU7 261 aa8.72□□□□□ -1.01
SMPD4-216ENST00000461187 NXT2Q9NPJ8 142 aaKnown RBP8.72□□□□□ -1.01
SMPD4-216ENST00000461187 TIMM17AQ99595 171 aa8.71□□□□□ -1.02
SMPD4-216ENST00000461187 GEMIN7Q9H840 131 aaKnown RBP8.71□□□□□ -1.02
SMPD4-216ENST00000461187 TP73-AS1Q9UF72 201 aa8.71□□□□□ -1.02
SMPD4-216ENST00000461187 PAPPA-AS1Q5QFB9 102 aa8.7□□□□□ -1.02
SMPD4-216ENST00000461187 MRPL55Q7Z7F7 128 aaKnown RBP8.7□□□□□ -1.02
SMPD4-216ENST00000461187 TOMM6Q96B49 74 aa8.7□□□□□ -1.02
SMPD4-216ENST00000461187 MUC2Q02817 5179 aa8.7□□□□□ -1.02
SMPD4-216ENST00000461187 A0A087X002 238 aa8.68□□□□□ -1.02
SMPD4-216ENST00000461187 BCE1O60756 84 aa8.68□□□□□ -1.02
SMPD4-216ENST00000461187 G0S2P27469 103 aa8.68□□□□□ -1.02
SMPD4-216ENST00000461187 CXCL5P42830 114 aa8.68□□□□□ -1.02
SMPD4-216ENST00000461187 SMIM1B2RUZ4 78 aa8.67□□□□□ -1.02
SMPD4-216ENST00000461187 TSPAN13O95857 204 aa8.67□□□□□ -1.02
SMPD4-216ENST00000461187 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
SMPD4-216ENST00000461187 ERASQ7Z444 233 aa8.67□□□□□ -1.02
SMPD4-216ENST00000461187 LINC00167Q96N53 147 aa8.67□□□□□ -1.02
SMPD4-216ENST00000461187 KIAA1644Q3SXP7 199 aa8.66□□□□□ -1.02
SMPD4-216ENST00000461187 IGLV5-45A0A087WSX0 123 aa8.65□□□□□ -1.02
SMPD4-216ENST00000461187 TINCRA0A1B0GVN0 87 aa8.65□□□□□ -1.02
SMPD4-216ENST00000461187 RPL37AP8A6NKH3 93 aa8.65□□□□□ -1.02
SMPD4-216ENST00000461187 ADCYAP1P18509 176 aa8.65□□□□□ -1.02
SMPD4-216ENST00000461187 PDZD11Q5EBL8 140 aa8.65□□□□□ -1.02
SMPD4-216ENST00000461187 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
SMPD4-216ENST00000461187 SCGB3A1Q96QR1 104 aa8.65□□□□□ -1.02
SMPD4-216ENST00000461187 CRYGAP11844 174 aa8.64□□□□□ -1.03
SMPD4-216ENST00000461187 TYMSOSQ8TAI1 123 aa8.64□□□□□ -1.03
SMPD4-216ENST00000461187 IGLV5-37A0A075B6J1 123 aa8.62□□□□□ -1.03
SMPD4-216ENST00000461187 GAGE10A6NGK3 116 aa8.62□□□□□ -1.03
SMPD4-216ENST00000461187 RAB14P61106 215 aa8.62□□□□□ -1.03
SMPD4-216ENST00000461187 KRTAP13-1Q8IUC0 172 aa8.62□□□□□ -1.03
SMPD4-216ENST00000461187 ANAPC11Q9NYG5 84 aa8.62□□□□□ -1.03
SMPD4-216ENST00000461187 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
SMPD4-216ENST00000461187 SPINK8P0C7L1 97 aa8.61□□□□□ -1.03
SMPD4-216ENST00000461187 RAB5BP61020 215 aa8.61□□□□□ -1.03
SMPD4-216ENST00000461187 CST9LQ9H4G1 147 aa8.61□□□□□ -1.03
SMPD4-216ENST00000461187 LINC01549A6NIU2 74 aa8.6□□□□□ -1.03
SMPD4-216ENST00000461187 KRTAP13-2Q52LG2 175 aa8.6□□□□□ -1.03
SMPD4-216ENST00000461187 TRAV9-1A0A075B6T8 112 aa8.59□□□□□ -1.03
SMPD4-216ENST00000461187 NKAPP1Q8N9T2 125 aa8.59□□□□□ -1.03
SMPD4-216ENST00000461187 UBE2AP49459 152 aa8.58□□□□□ -1.04
SMPD4-216ENST00000461187 PMVKQ15126 192 aa8.58□□□□□ -1.04
SMPD4-216ENST00000461187 A0A0U1RQV1 116 aa8.57□□□□□ -1.04
SMPD4-216ENST00000461187 SCO1O75880 301 aa8.57□□□□□ -1.04
SMPD4-216ENST00000461187 GNB1LQ9BYB4 327 aa8.57□□□□□ -1.04
SMPD4-216ENST00000461187 MRPL18Q9H0U6 180 aaKnown RBP8.57□□□□□ -1.04
SMPD4-216ENST00000461187 IGKV2-28A0A075B6P5 120 aa8.56□□□□□ -1.04
SMPD4-216ENST00000461187 IGKV2D-28P01615 120 aa8.56□□□□□ -1.04
SMPD4-216ENST00000461187 FAM229BQ4G0N7 80 aa8.56□□□□□ -1.04
SMPD4-216ENST00000461187 CLLU1Q5K131 121 aa8.56□□□□□ -1.04
SMPD4-216ENST00000461187 H3BRM9 83 aa8.55□□□□□ -1.04
SMPD4-216ENST00000461187 ATP5LO75964 103 aa8.55□□□□□ -1.04
SMPD4-216ENST00000461187 IGLV5-39A0A0G2JS06 123 aa8.54□□□□□ -1.04
SMPD4-216ENST00000461187 TMEM218A2RU14 115 aa8.54□□□□□ -1.04
SMPD4-216ENST00000461187 PFN2P35080 140 aa8.54□□□□□ -1.04
SMPD4-216ENST00000461187 LINC00304Q8N9R0 145 aa8.54□□□□□ -1.04
SMPD4-216ENST00000461187 RETNLBQ9BQ08 111 aa8.54□□□□□ -1.04
SMPD4-216ENST00000461187 IGLC3P0DOY3 106 aa8.53□□□□□ -1.04
SMPD4-216ENST00000461187 VPREB1P12018 145 aa8.53□□□□□ -1.04
SMPD4-216ENST00000461187 FA2HQ7L5A8 372 aa8.53□□□□□ -1.04
SMPD4-216ENST00000461187 SMCO4Q9NRQ5 59 aa8.53□□□□□ -1.04
SMPD4-216ENST00000461187 S100PP25815 95 aa8.52□□□□□ -1.05
SMPD4-216ENST00000461187 PRLHP81277 87 aa8.52□□□□□ -1.05
SMPD4-216ENST00000461187 UQCC3Q6UW78 93 aa8.52□□□□□ -1.05
SMPD4-216ENST00000461187 SND1-IT1Q9HBX3 110 aa8.52□□□□□ -1.05
SMPD4-216ENST00000461187 A0A096LNJ9 63 aa8.51□□□□□ -1.05
SMPD4-216ENST00000461187 TMEM238C9JI98 176 aa8.51□□□□□ -1.05
SMPD4-216ENST00000461187 ZNF22P17026 224 aaPredicted RBP8.51□□□□□ -1.05
SMPD4-216ENST00000461187 COX19Q49B96 90 aa8.51□□□□□ -1.05
SMPD4-216ENST00000461187 FAM19A1Q7Z5A9 133 aa8.51□□□□□ -1.05
SMPD4-216ENST00000461187 TMEM126AQ9H061 195 aa8.51□□□□□ -1.05
SMPD4-216ENST00000461187 ERG28Q9UKR5 140 aa8.51□□□□□ -1.05
SMPD4-216ENST00000461187 FAT4Q6V0I7 4981 aa8.5□□□□□ -1.05
SMPD4-216ENST00000461187 IGKV2D-26A0A0A0MRZ7 120 aa8.5□□□□□ -1.05
SMPD4-216ENST00000461187 FABP9Q0Z7S8 132 aa8.5□□□□□ -1.05
SMPD4-216ENST00000461187 LCE2AQ5TA79 106 aaPredicted RBP8.5□□□□□ -1.05
SMPD4-216ENST00000461187 Q8NDZ9 215 aa8.5□□□□□ -1.05
SMPD4-216ENST00000461187 SEC11CQ9BY50 192 aa8.5□□□□□ -1.05
SMPD4-216ENST00000461187 NDUFA6P56556 154 aa8.49□□□□□ -1.05
SMPD4-216ENST00000461187 COX17Q14061 63 aa8.49□□□□□ -1.05
SMPD4-216ENST00000461187 M0R378 163 aa8.48□□□□□ -1.05
SMPD4-216ENST00000461187 RPL24P83731 157 aaKnown RBP8.48□□□□□ -1.05
SMPD4-216ENST00000461187 TPRXLQ17RH7 258 aa8.48□□□□□ -1.05
SMPD4-216ENST00000461187 PLEKHB2Q96CS7 222 aa8.48□□□□□ -1.05
SMPD4-216ENST00000461187 URB1-AS1Q96HZ7 61 aa8.48□□□□□ -1.05
SMPD4-216ENST00000461187 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
SMPD4-216ENST00000461187 KRTAP9-2Q9BYQ4 174 aa8.48□□□□□ -1.05
SMPD4-216ENST00000461187 MUC17Q685J3 4493 aa8.48□□□□□ -1.05
SMPD4-216ENST00000461187 CTAG1AP78358 180 aa8.47□□□□□ -1.05
SMPD4-216ENST00000461187 IGLV7-46A0A075B6I9 117 aa8.45□□□□□ -1.06
SMPD4-216ENST00000461187 C11orf86A6NJI1 115 aa8.45□□□□□ -1.06
SMPD4-216ENST00000461187 LINC00614P0C842 121 aa8.45□□□□□ -1.06
SMPD4-216ENST00000461187 IFITM2Q01629 132 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms