RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

TSL 1 (best) BASIC

Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 C15orf56Q8N910 161 aa7.22□□□□□ -1.25
UPK1B-202ENST00000460625 HIST1H4GQ99525 98 aa7.22□□□□□ -1.25
UPK1B-202ENST00000460625 APOMO95445 188 aa7.21□□□□□ -1.25
UPK1B-202ENST00000460625 GCSHP23434 173 aa7.21□□□□□ -1.25
UPK1B-202ENST00000460625 SPAG11BQ08648 103 aa7.21□□□□□ -1.25
UPK1B-202ENST00000460625 HIGD2BQ4VC39 106 aa7.21□□□□□ -1.25
UPK1B-202ENST00000460625 DAND5Q8N907 189 aa7.21□□□□□ -1.25
UPK1B-202ENST00000460625 NBDYA0A0U1RRE5 68 aa7.21□□□□□ -1.26
UPK1B-202ENST00000460625 FXYD2P54710 66 aa7.21□□□□□ -1.26
UPK1B-202ENST00000460625 SPANXB1Q9NS25 103 aaPredicted RBP7.21□□□□□ -1.26
UPK1B-202ENST00000460625 SMIM13P0DJ93 91 aa7.2□□□□□ -1.26
UPK1B-202ENST00000460625 SRSF9Q13242 221 aaKnown RBP eCLIP7.2□□□□□ -1.26
UPK1B-202ENST00000460625 C10orf25Q5T742 122 aa7.2□□□□□ -1.26
UPK1B-202ENST00000460625 CFAP161Q6P656 301 aa7.2□□□□□ -1.26
UPK1B-202ENST00000460625 CEND1Q8N111 149 aa7.2□□□□□ -1.26
UPK1B-202ENST00000460625 TMEM238C9JI98 176 aa7.19□□□□□ -1.26
UPK1B-202ENST00000460625 EIF4EBP3O60516 100 aaPredicted RBP7.19□□□□□ -1.26
UPK1B-202ENST00000460625 CKS1BP61024 79 aa7.19□□□□□ -1.26
UPK1B-202ENST00000460625 HERV-K104P63124 156 aa7.19□□□□□ -1.26
UPK1B-202ENST00000460625 TAL2Q16559 108 aa7.19□□□□□ -1.26
UPK1B-202ENST00000460625 MEIG1Q5JSS6 88 aa7.19□□□□□ -1.26
UPK1B-202ENST00000460625 TM2D2Q9BX73 214 aa7.19□□□□□ -1.26
UPK1B-202ENST00000460625 M0R2N4 97 aa7.19□□□□□ -1.26
UPK1B-202ENST00000460625 NPC2P61916 151 aa7.19□□□□□ -1.26
UPK1B-202ENST00000460625 UNQ6190/PRO20217Q6UXQ8 127 aa7.19□□□□□ -1.26
UPK1B-202ENST00000460625 TIMM17BO60830 172 aa7.18□□□□□ -1.26
UPK1B-202ENST00000460625 C9orf116Q5BN46 136 aaPredicted RBP7.18□□□□□ -1.26
UPK1B-202ENST00000460625 MUSTN1Q8IVN3 82 aa7.18□□□□□ -1.26
UPK1B-202ENST00000460625 NTN5Q8WTR8 489 aaPredicted RBP7.18□□□□□ -1.26
UPK1B-202ENST00000460625 RMI2Q96E14 147 aa7.18□□□□□ -1.26
UPK1B-202ENST00000460625 FRAS1Q86XX4 4008 aa7.18□□□□□ -1.26
UPK1B-202ENST00000460625 LECT2O14960 151 aa7.17□□□□□ -1.26
UPK1B-202ENST00000460625 SPANXDQ9BXN6 97 aa7.17□□□□□ -1.26
UPK1B-202ENST00000460625 SPANXCQ9NY87 97 aa7.17□□□□□ -1.26
UPK1B-202ENST00000460625 SACSQ9NZJ4 4579 aa7.17□□□□□ -1.26
UPK1B-202ENST00000460625 USP17L23D6RBM5 183 aa7.17□□□□□ -1.26
UPK1B-202ENST00000460625 PFN2P35080 140 aa7.17□□□□□ -1.26
UPK1B-202ENST00000460625 CXCL5P42830 114 aa7.17□□□□□ -1.26
UPK1B-202ENST00000460625 CIRBPQ14011 172 aaKnown RBP7.17□□□□□ -1.26
UPK1B-202ENST00000460625 WFDC2Q14508 124 aa7.17□□□□□ -1.26
UPK1B-202ENST00000460625 TTC32Q5I0X7 151 aa7.17□□□□□ -1.26
UPK1B-202ENST00000460625 ERG28Q9UKR5 140 aa7.17□□□□□ -1.26
UPK1B-202ENST00000460625 GVQW2A0A096LPI5 108 aaPredicted RBP7.16□□□□□ -1.26
UPK1B-202ENST00000460625 C3orf84H3BNL1 204 aa7.16□□□□□ -1.26
UPK1B-202ENST00000460625 ZNF561-AS1K7EIQ3 104 aa7.16□□□□□ -1.26
UPK1B-202ENST00000460625 LY6G6CO95867 125 aa7.16□□□□□ -1.26
UPK1B-202ENST00000460625 PTTG1IPP53801 180 aa7.16□□□□□ -1.26
UPK1B-202ENST00000460625 SOSTDC1Q6X4U4 206 aa7.16□□□□□ -1.26
UPK1B-202ENST00000460625 K7ERJ3 54 aa7.15□□□□□ -1.26
UPK1B-202ENST00000460625 LINC00158P58513 81 aa7.15□□□□□ -1.26
UPK1B-202ENST00000460625 SFTA2Q6UW10 78 aa7.15□□□□□ -1.26
UPK1B-202ENST00000460625 MIR7-3HGQ8N6C7 128 aa7.15□□□□□ -1.26
UPK1B-202ENST00000460625 C6orf48Q9UBA6 75 aa7.15□□□□□ -1.26
UPK1B-202ENST00000460625 DNAH17Q9UFH2 4485 aa7.15□□□□□ -1.26
UPK1B-202ENST00000460625 HECTD4Q9Y4D8 3996 aa7.15□□□□□ -1.27
UPK1B-202ENST00000460625 Q6ZRN7 208 aaPredicted RBP7.15□□□□□ -1.27
UPK1B-202ENST00000460625 Q6ZVH6 145 aa7.15□□□□□ -1.27
UPK1B-202ENST00000460625 LINC00476Q8WZB0 136 aa7.15□□□□□ -1.27
UPK1B-202ENST00000460625 COX11Q9Y6N1 276 aa7.15□□□□□ -1.27
UPK1B-202ENST00000460625 A4D1N5 150 aa7.14□□□□□ -1.27
UPK1B-202ENST00000460625 SLPIP03973 132 aa7.14□□□□□ -1.27
UPK1B-202ENST00000460625 Q6ZRU5 148 aa7.14□□□□□ -1.27
UPK1B-202ENST00000460625 LINC00308Q8TCZ7 52 aa7.14□□□□□ -1.27
UPK1B-202ENST00000460625 CAMK2N2Q96S95 79 aa7.14□□□□□ -1.27
UPK1B-202ENST00000460625 NHP2Q9NX24 153 aaKnown RBP7.14□□□□□ -1.27
UPK1B-202ENST00000460625 PSCAO43653 123 aa7.13□□□□□ -1.27
UPK1B-202ENST00000460625 COL5A1-AS1Q5SY13 56 aa7.13□□□□□ -1.27
UPK1B-202ENST00000460625 Q6ZR54 194 aa7.13□□□□□ -1.27
UPK1B-202ENST00000460625 C2orf48Q96LS8 159 aa7.13□□□□□ -1.27
UPK1B-202ENST00000460625 A6NDN8 102 aa7.11□□□□□ -1.27
UPK1B-202ENST00000460625 TAX1BP3O14907 124 aa7.11□□□□□ -1.27
UPK1B-202ENST00000460625 CFC1BP0CG36 223 aa7.11□□□□□ -1.27
UPK1B-202ENST00000460625 CFC1P0CG37 223 aa7.11□□□□□ -1.27
UPK1B-202ENST00000460625 IFITM1P13164 125 aa7.11□□□□□ -1.27
UPK1B-202ENST00000460625 RPL24P83731 157 aaKnown RBP7.11□□□□□ -1.27
UPK1B-202ENST00000460625 LBHQ53QV2 105 aaPredicted RBP7.11□□□□□ -1.27
UPK1B-202ENST00000460625 RAB37Q96AX2 223 aa7.11□□□□□ -1.27
UPK1B-202ENST00000460625 A0A1B0GWB2 263 aa7.11□□□□□ -1.27
UPK1B-202ENST00000460625 SYCNQ0VAF6 134 aa7.11□□□□□ -1.27
UPK1B-202ENST00000460625 COX17Q14061 63 aa7.11□□□□□ -1.27
UPK1B-202ENST00000460625 TRBV30A0A0K0K1B3 111 aa7.1□□□□□ -1.27
UPK1B-202ENST00000460625 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
UPK1B-202ENST00000460625 LRCOL1A6NCL2 159 aa7.1□□□□□ -1.27
UPK1B-202ENST00000460625 SVIPQ8NHG7 77 aa7.09□□□□□ -1.27
UPK1B-202ENST00000460625 FAT2Q9NYQ8 4349 aa7.09□□□□□ -1.27
UPK1B-202ENST00000460625 CARD19Q96LW7 228 aa7.09□□□□□ -1.27
UPK1B-202ENST00000460625 NAA38Q9BRA0 125 aaKnown RBP7.09□□□□□ -1.27
UPK1B-202ENST00000460625 SND1-IT1Q9HBX3 110 aa7.09□□□□□ -1.27
UPK1B-202ENST00000460625 DNAH11Q96DT5 4516 aa7.09□□□□□ -1.28
UPK1B-202ENST00000460625 A0A1B0GV90 55 aa7.08□□□□□ -1.28
UPK1B-202ENST00000460625 Q8NDZ9 215 aa7.08□□□□□ -1.28
UPK1B-202ENST00000460625 F8WDY8 70 aa7.07□□□□□ -1.28
UPK1B-202ENST00000460625 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.07□□□□□ -1.28
UPK1B-202ENST00000460625 Q6ZRP5 223 aa7.07□□□□□ -1.28
UPK1B-202ENST00000460625 XAGE1AQ9HD64 81 aa7.07□□□□□ -1.28
UPK1B-202ENST00000460625 IGKV2-28A0A075B6P5 120 aa7.06□□□□□ -1.28
UPK1B-202ENST00000460625 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.06□□□□□ -1.28
UPK1B-202ENST00000460625 A0A0B4J2C4 111 aa7.06□□□□□ -1.28
UPK1B-202ENST00000460625 LOC107984156A0A0G2JMH3 177 aa7.06□□□□□ -1.28
UPK1B-202ENST00000460625 IGKV2D-28P01615 120 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms