RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 Q1RN00 199 aa9.73□□□□□ -0.85
ERCC3-205ENST00000460485 CD164L2Q6UWJ8 174 aa9.73□□□□□ -0.85
ERCC3-205ENST00000460485 RYR2Q92736 4967 aa9.72□□□□□ -0.85
ERCC3-205ENST00000460485 DEFB4AO15263 64 aa9.72□□□□□ -0.85
ERCC3-205ENST00000460485 SCGB1C2P0DMR2 95 aa9.72□□□□□ -0.85
ERCC3-205ENST00000460485 H3BMG7 143 aa9.71□□□□□ -0.86
ERCC3-205ENST00000460485 IGKV3OR2-268A0A0C4DH90 116 aa9.7□□□□□ -0.86
ERCC3-205ENST00000460485 REG3AQ06141 175 aa9.7□□□□□ -0.86
ERCC3-205ENST00000460485 ATXN8Q156A1 80 aa9.7□□□□□ -0.86
ERCC3-205ENST00000460485 CASC10Q5T4H9 136 aa9.7□□□□□ -0.86
ERCC3-205ENST00000460485 CBY1Q9Y3M2 126 aa9.7□□□□□ -0.86
ERCC3-205ENST00000460485 DYNC2H1Q8NCM8 4307 aaKnown RBP9.7□□□□□ -0.86
ERCC3-205ENST00000460485 A0A096LPF7 62 aa9.69□□□□□ -0.86
ERCC3-205ENST00000460485 COX7A2LO14548 114 aa9.69□□□□□ -0.86
ERCC3-205ENST00000460485 COX17Q14061 63 aa9.69□□□□□ -0.86
ERCC3-205ENST00000460485 PRO0461Q9UI25 63 aa9.69□□□□□ -0.86
ERCC3-205ENST00000460485 TRAV13-2A0A0B4J235 113 aa9.68□□□□□ -0.86
ERCC3-205ENST00000460485 TRAV8-4A0A0B4J246 113 aa9.68□□□□□ -0.86
ERCC3-205ENST00000460485 TCL1BO95988 128 aa9.68□□□□□ -0.86
ERCC3-205ENST00000460485 ANGP03950 147 aaKnown RBP9.68□□□□□ -0.86
ERCC3-205ENST00000460485 HTN3P15516 51 aa9.68□□□□□ -0.86
ERCC3-205ENST00000460485 LINC01600Q96MT4 127 aa9.68□□□□□ -0.86
ERCC3-205ENST00000460485 PRR34Q9NV39 138 aa9.68□□□□□ -0.86
ERCC3-205ENST00000460485 TOMM7Q9P0U1 55 aa9.68□□□□□ -0.86
ERCC3-205ENST00000460485 STAB2Q8WWQ8 2551 aa9.68□□□□□ -0.86
ERCC3-205ENST00000460485 LCE6AA0A183 80 aa9.67□□□□□ -0.86
ERCC3-205ENST00000460485 EIF4EBP3O60516 100 aaPredicted RBP9.67□□□□□ -0.86
ERCC3-205ENST00000460485 RPL13AP40429 203 aaKnown RBP9.67□□□□□ -0.86
ERCC3-205ENST00000460485 XCL1P47992 114 aa9.67□□□□□ -0.86
ERCC3-205ENST00000460485 C6orf226Q5I0X4 101 aa9.67□□□□□ -0.86
ERCC3-205ENST00000460485 CFAP161Q6P656 301 aa9.67□□□□□ -0.86
ERCC3-205ENST00000460485 LINC00269Q8N2A0 174 aa9.67□□□□□ -0.86
ERCC3-205ENST00000460485 CHCHD10Q8WYQ3 142 aaPredicted RBP9.67□□□□□ -0.86
ERCC3-205ENST00000460485 SPATA25Q9BR10 227 aa9.67□□□□□ -0.86
ERCC3-205ENST00000460485 SACSQ9NZJ4 4579 aa9.66□□□□□ -0.86
ERCC3-205ENST00000460485 C5orf38Q86SI9 138 aa9.66□□□□□ -0.86
ERCC3-205ENST00000460485 CRPP02741 224 aa9.65□□□□□ -0.86
ERCC3-205ENST00000460485 MALP21145 153 aa9.65□□□□□ -0.86
ERCC3-205ENST00000460485 LYPD5Q6UWN5 251 aa9.65□□□□□ -0.86
ERCC3-205ENST00000460485 DNAH1Q9P2D7 4330 aa9.64□□□□□ -0.87
ERCC3-205ENST00000460485 TRIAP1O43715 76 aa9.64□□□□□ -0.87
ERCC3-205ENST00000460485 CKS1BP61024 79 aa9.64□□□□□ -0.87
ERCC3-205ENST00000460485 MIR7-3HGQ8N6C7 128 aa9.64□□□□□ -0.87
ERCC3-205ENST00000460485 KLK5Q9Y337 293 aaPredicted RBP9.64□□□□□ -0.87
ERCC3-205ENST00000460485 H7C2G1 150 aa9.63□□□□□ -0.87
ERCC3-205ENST00000460485 LINC00158P58513 81 aa9.63□□□□□ -0.87
ERCC3-205ENST00000460485 TEN1Q86WV5 123 aa9.63□□□□□ -0.87
ERCC3-205ENST00000460485 DAND5Q8N907 189 aa9.63□□□□□ -0.87
ERCC3-205ENST00000460485 C15orf53Q8NAA6 179 aa9.63□□□□□ -0.87
ERCC3-205ENST00000460485 C11orf45Q8TAV5 145 aa9.63□□□□□ -0.87
ERCC3-205ENST00000460485 LYSTQ99698 3801 aa9.63□□□□□ -0.87
ERCC3-205ENST00000460485 H3BT86 120 aa9.62□□□□□ -0.87
ERCC3-205ENST00000460485 NPC2P61916 151 aa9.62□□□□□ -0.87
ERCC3-205ENST00000460485 WFDC2Q14508 124 aa9.62□□□□□ -0.87
ERCC3-205ENST00000460485 SOSTDC1Q6X4U4 206 aa9.62□□□□□ -0.87
ERCC3-205ENST00000460485 LST1O00453 97 aa9.61□□□□□ -0.87
ERCC3-205ENST00000460485 FOXI1Q12951 378 aa9.61□□□□□ -0.87
ERCC3-205ENST00000460485 LINC01620Q4KN68 170 aa9.61□□□□□ -0.87
ERCC3-205ENST00000460485 Q6ZTC4 211 aa9.61□□□□□ -0.87
ERCC3-205ENST00000460485 CARD19Q96LW7 228 aa9.61□□□□□ -0.87
ERCC3-205ENST00000460485 VPS25Q9BRG1 176 aa9.61□□□□□ -0.87
ERCC3-205ENST00000460485 SND1-IT1Q9HBX3 110 aa9.61□□□□□ -0.87
ERCC3-205ENST00000460485 F8WDY8 70 aa9.6□□□□□ -0.87
ERCC3-205ENST00000460485 SLC25A20O43772 301 aa9.6□□□□□ -0.87
ERCC3-205ENST00000460485 ETDBQ3ZM63 59 aa9.6□□□□□ -0.87
ERCC3-205ENST00000460485 CLPSL2Q6UWE3 100 aa9.6□□□□□ -0.87
ERCC3-205ENST00000460485 PPDPFLQ8WWR9 84 aa9.6□□□□□ -0.87
ERCC3-205ENST00000460485 TM2D3Q9BRN9 247 aa9.6□□□□□ -0.87
ERCC3-205ENST00000460485 RETNQ9HD89 108 aa9.6□□□□□ -0.87
ERCC3-205ENST00000460485 DNAH7Q8WXX0 4024 aa9.6□□□□□ -0.87
ERCC3-205ENST00000460485 DEFB131BA0A096LNP1 70 aa9.59□□□□□ -0.87
ERCC3-205ENST00000460485 TRAV10A0A0B4J240 114 aa9.59□□□□□ -0.87
ERCC3-205ENST00000460485 A0A0J9YWU9 116 aa9.59□□□□□ -0.87
ERCC3-205ENST00000460485 TRBV10-2A0A0K0K1G8 114 aa9.59□□□□□ -0.87
ERCC3-205ENST00000460485 NDUFC2O95298 119 aa9.59□□□□□ -0.87
ERCC3-205ENST00000460485 RPL28P46779 137 aaKnown RBP9.59□□□□□ -0.87
ERCC3-205ENST00000460485 KIAA0087Q14695 138 aa9.59□□□□□ -0.87
ERCC3-205ENST00000460485 GVQW2A0A096LPI5 108 aaPredicted RBP9.58□□□□□ -0.88
ERCC3-205ENST00000460485 A0A0U1RRA0 63 aa9.58□□□□□ -0.88
ERCC3-205ENST00000460485 C9JAW5 83 aa9.58□□□□□ -0.88
ERCC3-205ENST00000460485 GAGE12HA6NDE8 117 aa9.57□□□□□ -0.88
ERCC3-205ENST00000460485 TRACP01848 142 aa9.57□□□□□ -0.88
ERCC3-205ENST00000460485 SMCPP49901 116 aaPredicted RBP9.57□□□□□ -0.88
ERCC3-205ENST00000460485 CCL18P55774 89 aa9.57□□□□□ -0.88
ERCC3-205ENST00000460485 RNF151Q2KHN1 245 aa9.57□□□□□ -0.88
ERCC3-205ENST00000460485 LINC01556Q5JQF7 62 aa9.57□□□□□ -0.88
ERCC3-205ENST00000460485 ANKRD29Q8N6D5 301 aa9.57□□□□□ -0.88
ERCC3-205ENST00000460485 KLK12Q9UKR0 248 aa9.57□□□□□ -0.88
ERCC3-205ENST00000460485 H0YGX0 51 aa9.56□□□□□ -0.88
ERCC3-205ENST00000460485 SPAG11BQ08648 103 aa9.56□□□□□ -0.88
ERCC3-205ENST00000460485 CSMD3Q7Z407 3707 aa9.56□□□□□ -0.88
ERCC3-205ENST00000460485 ENHOQ6UWT2 76 aa9.55□□□□□ -0.88
ERCC3-205ENST00000460485 IGLV10-54A0A075B6I4 117 aa9.54□□□□□ -0.88
ERCC3-205ENST00000460485 PFN2P35080 140 aa9.54□□□□□ -0.88
ERCC3-205ENST00000460485 UBE2WQ96B02 151 aa9.53□□□□□ -0.88
ERCC3-205ENST00000460485 IGKV2-28A0A075B6P5 120 aa9.52□□□□□ -0.89
ERCC3-205ENST00000460485 IGKV2D-28P01615 120 aa9.52□□□□□ -0.89
ERCC3-205ENST00000460485 NANOS2P60321 138 aaKnown RBP9.52□□□□□ -0.89
ERCC3-205ENST00000460485 DNAH10OSP0CZ25 163 aa9.51□□□□□ -0.89
ERCC3-205ENST00000460485 C2orf82Q6UX34 121 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms