RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 CCL18P55774 89 aa11.7□□□□□ -0.54
CDK11A-209ENST00000460465 CIRBPQ14011 172 aaKnown RBP11.7□□□□□ -0.54
CDK11A-209ENST00000460465 MEIG1Q5JSS6 88 aa11.7□□□□□ -0.54
CDK11A-209ENST00000460465 A0A1B0GWB2 263 aa11.69□□□□□ -0.54
CDK11A-209ENST00000460465 Q8IZM0 81 aa11.69□□□□□ -0.54
CDK11A-209ENST00000460465 PRSS2P07478 247 aa11.69□□□□□ -0.54
CDK11A-209ENST00000460465 DNAH10OSP0CZ25 163 aa11.69□□□□□ -0.54
CDK11A-209ENST00000460465 DAND5Q8N907 189 aa11.69□□□□□ -0.54
CDK11A-209ENST00000460465 A0A0U1RRA0 63 aa11.68□□□□□ -0.54
CDK11A-209ENST00000460465 A0A1B0GV72 72 aa11.68□□□□□ -0.54
CDK11A-209ENST00000460465 C6orf226Q5I0X4 101 aa11.68□□□□□ -0.54
CDK11A-209ENST00000460465 NPC2P61916 151 aa11.68□□□□□ -0.54
CDK11A-209ENST00000460465 K7EP34 96 aa11.67□□□□□ -0.54
CDK11A-209ENST00000460465 RPL24P83731 157 aaKnown RBP11.67□□□□□ -0.54
CDK11A-209ENST00000460465 APOMO95445 188 aa11.66□□□□□ -0.54
CDK11A-209ENST00000460465 KIAA0087Q14695 138 aa11.65□□□□□ -0.54
CDK11A-209ENST00000460465 SFTA2Q6UW10 78 aa11.65□□□□□ -0.54
CDK11A-209ENST00000460465 CFC1BP0CG36 223 aa11.64□□□□□ -0.55
CDK11A-209ENST00000460465 CFC1P0CG37 223 aa11.64□□□□□ -0.55
CDK11A-209ENST00000460465 KRTAP26-1Q6PEX3 210 aa11.64□□□□□ -0.55
CDK11A-209ENST00000460465 C2orf82Q6UX34 121 aa11.64□□□□□ -0.55
CDK11A-209ENST00000460465 EIF4EBP3O60516 100 aaPredicted RBP11.64□□□□□ -0.55
CDK11A-209ENST00000460465 UPK3BQ9BT76 320 aa11.64□□□□□ -0.55
CDK11A-209ENST00000460465 IFITM1P13164 125 aa11.63□□□□□ -0.55
CDK11A-209ENST00000460465 APLNQ9ULZ1 77 aa11.63□□□□□ -0.55
CDK11A-209ENST00000460465 KLK5Q9Y337 293 aaPredicted RBP11.63□□□□□ -0.55
CDK11A-209ENST00000460465 STAB2Q8WWQ8 2551 aa11.63□□□□□ -0.55
CDK11A-209ENST00000460465 A0A1W2PPM0 123 aa11.63□□□□□ -0.55
CDK11A-209ENST00000460465 CKS1BP61024 79 aa11.63□□□□□ -0.55
CDK11A-209ENST00000460465 LINC00308Q8TCZ7 52 aa11.62□□□□□ -0.55
CDK11A-209ENST00000460465 SPCS1Q9Y6A9 102 aa11.62□□□□□ -0.55
CDK11A-209ENST00000460465 C1orf43Q9BWL3 253 aa11.61□□□□□ -0.55
CDK11A-209ENST00000460465 IBA57-AS1B1ANH7 110 aa11.61□□□□□ -0.55
CDK11A-209ENST00000460465 CXCL5P42830 114 aa11.61□□□□□ -0.55
CDK11A-209ENST00000460465 SPAG11BQ08648 103 aa11.61□□□□□ -0.55
CDK11A-209ENST00000460465 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.6□□□□□ -0.55
CDK11A-209ENST00000460465 SOSTDC1Q6X4U4 206 aa11.6□□□□□ -0.55
CDK11A-209ENST00000460465 MEGF8Q7Z7M0 2845 aa11.6□□□□□ -0.55
CDK11A-209ENST00000460465 IGKV2D-24A0A075B6R9 120 aa11.6□□□□□ -0.55
CDK11A-209ENST00000460465 LINC00158P58513 81 aa11.6□□□□□ -0.55
CDK11A-209ENST00000460465 Q9HAA7 133 aa11.6□□□□□ -0.55
CDK11A-209ENST00000460465 ERG28Q9UKR5 140 aa11.6□□□□□ -0.55
CDK11A-209ENST00000460465 PRKDCP78527 4128 aaKnown RBP11.6□□□□□ -0.55
CDK11A-209ENST00000460465 NUPR2A6NF83 97 aa11.59□□□□□ -0.55
CDK11A-209ENST00000460465 PFN2P35080 140 aa11.59□□□□□ -0.55
CDK11A-209ENST00000460465 MIR7-3HGQ8N6C7 128 aa11.59□□□□□ -0.55
CDK11A-209ENST00000460465 PGPEP1Q9NXJ5 209 aa11.59□□□□□ -0.55
CDK11A-209ENST00000460465 A0A0B4J2C4 111 aa11.59□□□□□ -0.55
CDK11A-209ENST00000460465 FABP2P12104 132 aa11.59□□□□□ -0.55
CDK11A-209ENST00000460465 C6orf223Q8N319 242 aa11.59□□□□□ -0.55
CDK11A-209ENST00000460465 LINC00526Q96FQ7 95 aa11.59□□□□□ -0.55
CDK11A-209ENST00000460465 COPS9Q8WXC6 57 aa11.58□□□□□ -0.56
CDK11A-209ENST00000460465 PRO1854Q9UHT4 67 aa11.58□□□□□ -0.56
CDK11A-209ENST00000460465 TSPAN13O95857 204 aa11.57□□□□□ -0.56
CDK11A-209ENST00000460465 UBE2DNLQ8IWF7 75 aa11.56□□□□□ -0.56
CDK11A-209ENST00000460465 C10orf25Q5T742 122 aa11.54□□□□□ -0.56
CDK11A-209ENST00000460465 UNQ6190/PRO20217Q6UXQ8 127 aa11.54□□□□□ -0.56
CDK11A-209ENST00000460465 C15orf56Q8N910 161 aa11.54□□□□□ -0.56
CDK11A-209ENST00000460465 PPDPFQ9H3Y8 114 aa11.54□□□□□ -0.56
CDK11A-209ENST00000460465 HIGD2BQ4VC39 106 aa11.54□□□□□ -0.56
CDK11A-209ENST00000460465 NTN5Q8WTR8 489 aaPredicted RBP11.54□□□□□ -0.56
CDK11A-209ENST00000460465 DYNC2H1Q8NCM8 4307 aaKnown RBP11.54□□□□□ -0.56
CDK11A-209ENST00000460465 C9orf116Q5BN46 136 aaPredicted RBP11.53□□□□□ -0.56
CDK11A-209ENST00000460465 H7C2G1 150 aa11.52□□□□□ -0.57
CDK11A-209ENST00000460465 ZNF561-AS1K7EIQ3 104 aa11.52□□□□□ -0.57
CDK11A-209ENST00000460465 COX17Q14061 63 aa11.52□□□□□ -0.57
CDK11A-209ENST00000460465 RMI2Q96E14 147 aa11.5□□□□□ -0.57
CDK11A-209ENST00000460465 SIGMAR1Q99720 223 aa11.5□□□□□ -0.57
CDK11A-209ENST00000460465 MTURNQ8N3F0 131 aa11.49□□□□□ -0.57
CDK11A-209ENST00000460465 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
CDK11A-209ENST00000460465 CSMD3Q7Z407 3707 aa11.49□□□□□ -0.57
CDK11A-209ENST00000460465 KRTAP1-5Q9BYS1 174 aa11.49□□□□□ -0.57
CDK11A-209ENST00000460465 Q1RN00 199 aa11.48□□□□□ -0.57
CDK11A-209ENST00000460465 CAMK2N2Q96S95 79 aa11.48□□□□□ -0.57
CDK11A-209ENST00000460465 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
CDK11A-209ENST00000460465 LOC107984156A0A0G2JMH3 177 aa11.48□□□□□ -0.57
CDK11A-209ENST00000460465 RPL13AP40429 203 aaKnown RBP11.48□□□□□ -0.57
CDK11A-209ENST00000460465 CASC10Q5T4H9 136 aa11.48□□□□□ -0.57
CDK11A-209ENST00000460465 ARL17AQ8IVW1 177 aa11.48□□□□□ -0.57
CDK11A-209ENST00000460465 GVQW2A0A096LPI5 108 aaPredicted RBP11.47□□□□□ -0.57
CDK11A-209ENST00000460465 C2orf48Q96LS8 159 aa11.46□□□□□ -0.57
CDK11A-209ENST00000460465 DNAH1Q9P2D7 4330 aa11.45□□□□□ -0.58
CDK11A-209ENST00000460465 PSMB2P49721 201 aa11.45□□□□□ -0.58
CDK11A-209ENST00000460465 Q6ZRU5 148 aa11.45□□□□□ -0.58
CDK11A-209ENST00000460465 DNAH7Q8WXX0 4024 aa11.45□□□□□ -0.58
CDK11A-209ENST00000460465 WFDC2Q14508 124 aa11.44□□□□□ -0.58
CDK11A-209ENST00000460465 LYSTQ99698 3801 aa11.44□□□□□ -0.58
CDK11A-209ENST00000460465 IGKV2-28A0A075B6P5 120 aa11.44□□□□□ -0.58
CDK11A-209ENST00000460465 TRBV30A0A0K0K1B3 111 aa11.44□□□□□ -0.58
CDK11A-209ENST00000460465 IGKV2D-28P01615 120 aa11.44□□□□□ -0.58
CDK11A-209ENST00000460465 USP17L23D6RBM5 183 aa11.43□□□□□ -0.58
CDK11A-209ENST00000460465 F8W1H4 67 aa11.43□□□□□ -0.58
CDK11A-209ENST00000460465 H3BMG7 143 aa11.42□□□□□ -0.58
CDK11A-209ENST00000460465 LYRM7Q5U5X0 104 aa11.42□□□□□ -0.58
CDK11A-209ENST00000460465 MUC7Q8TAX7 377 aa11.42□□□□□ -0.58
CDK11A-209ENST00000460465 F8WDY8 70 aa11.42□□□□□ -0.58
CDK11A-209ENST00000460465 TRIAP1O43715 76 aa11.42□□□□□ -0.58
CDK11A-209ENST00000460465 SCGB1C2P0DMR2 95 aa11.42□□□□□ -0.58
CDK11A-209ENST00000460465 LINC00337Q8N6G1 96 aa11.42□□□□□ -0.58
CDK11A-209ENST00000460465 TRAV13-2A0A0B4J235 113 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms