RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 C6orf223Q8N319 242 aa7.36□□□□□ -1.23
HERC4-207ENST00000460168 ATP5EP56381 51 aaPredicted RBP7.36□□□□□ -1.23
HERC4-207ENST00000460168 TRBV6-5A0A0K0K1A5 114 aa7.35□□□□□ -1.23
HERC4-207ENST00000460168 H7BZZ5 65 aa7.35□□□□□ -1.23
HERC4-207ENST00000460168 H7C423 109 aa7.35□□□□□ -1.23
HERC4-207ENST00000460168 IGHV3-53P01767 116 aa7.35□□□□□ -1.23
HERC4-207ENST00000460168 LYPD5Q6UWN5 251 aa7.35□□□□□ -1.23
HERC4-207ENST00000460168 LINC00474Q9P2X8 69 aa7.35□□□□□ -1.23
HERC4-207ENST00000460168 X6R8D5 127 aa7.35□□□□□ -1.23
HERC4-207ENST00000460168 VCYO14598 125 aa7.35□□□□□ -1.23
HERC4-207ENST00000460168 POLR2KP53803 58 aaKnown RBP7.35□□□□□ -1.23
HERC4-207ENST00000460168 DEFB104AQ8WTQ1 72 aa7.35□□□□□ -1.23
HERC4-207ENST00000460168 OVOL2Q9BRP0 275 aa7.35□□□□□ -1.23
HERC4-207ENST00000460168 MDFIQ99750 246 aa7.34□□□□□ -1.23
HERC4-207ENST00000460168 TRBV27A0A0K0K1C4 114 aa7.33□□□□□ -1.24
HERC4-207ENST00000460168 IGHV3-33P01772 117 aa7.33□□□□□ -1.24
HERC4-207ENST00000460168 PLNP26678 52 aa7.33□□□□□ -1.24
HERC4-207ENST00000460168 Q6ZSN1 163 aa7.33□□□□□ -1.24
HERC4-207ENST00000460168 TRBV30A0A0K0K1B3 111 aa7.33□□□□□ -1.24
HERC4-207ENST00000460168 LGALS3P17931 250 aaKnown RBP7.33□□□□□ -1.24
HERC4-207ENST00000460168 C11orf68Q9H3H3 251 aaKnown RBP7.33□□□□□ -1.24
HERC4-207ENST00000460168 ANK2Q01484 3957 aa7.33□□□□□ -1.24
HERC4-207ENST00000460168 CMYA5Q8N3K9 4069 aa7.32□□□□□ -1.24
HERC4-207ENST00000460168 PRSS1P07477 247 aa7.32□□□□□ -1.24
HERC4-207ENST00000460168 DEFB130BP0DP73 79 aa7.32□□□□□ -1.24
HERC4-207ENST00000460168 DEFB130AP0DP74 79 aa7.32□□□□□ -1.24
HERC4-207ENST00000460168 I3L3M4 83 aa7.32□□□□□ -1.24
HERC4-207ENST00000460168 XCL1P47992 114 aa7.32□□□□□ -1.24
HERC4-207ENST00000460168 DEFB4AO15263 64 aa7.31□□□□□ -1.24
HERC4-207ENST00000460168 RHOHQ15669 191 aa7.31□□□□□ -1.24
HERC4-207ENST00000460168 NOTCH1P46531 2555 aa7.31□□□□□ -1.24
HERC4-207ENST00000460168 TRGV4A0A0C4DH28 118 aa7.31□□□□□ -1.24
HERC4-207ENST00000460168 IGHV4-28A0A0C4DH34 117 aa7.31□□□□□ -1.24
HERC4-207ENST00000460168 K7EQD1 137 aa7.31□□□□□ -1.24
HERC4-207ENST00000460168 MIFP14174 115 aa7.31□□□□□ -1.24
HERC4-207ENST00000460168 DAD1P61803 113 aa7.31□□□□□ -1.24
HERC4-207ENST00000460168 CIRBPQ14011 172 aaKnown RBP7.31□□□□□ -1.24
HERC4-207ENST00000460168 C2orf66Q6UXQ4 117 aa7.31□□□□□ -1.24
HERC4-207ENST00000460168 DAND5Q8N907 189 aa7.31□□□□□ -1.24
HERC4-207ENST00000460168 IBA57-AS1B1ANH7 110 aa7.3□□□□□ -1.24
HERC4-207ENST00000460168 FAM222AQ5U5X8 452 aa7.3□□□□□ -1.24
HERC4-207ENST00000460168 SLC25A29Q8N8R3 303 aa7.3□□□□□ -1.24
HERC4-207ENST00000460168 TOMM6Q96B49 74 aa7.3□□□□□ -1.24
HERC4-207ENST00000460168 LYRM9A8MSI8 78 aa7.29□□□□□ -1.24
HERC4-207ENST00000460168 IGHV3-30P01768 117 aa7.29□□□□□ -1.24
HERC4-207ENST00000460168 IGHV3-30-5P0DP03 117 aa7.29□□□□□ -1.24
HERC4-207ENST00000460168 Q6JHZ5 121 aa7.29□□□□□ -1.24
HERC4-207ENST00000460168 SCGB3A1Q96QR1 104 aa7.29□□□□□ -1.24
HERC4-207ENST00000460168 MRPL35Q9NZE8 188 aaKnown RBP7.29□□□□□ -1.24
HERC4-207ENST00000460168 TRBV10-1A0A0K0K1A3 114 aa7.29□□□□□ -1.24
HERC4-207ENST00000460168 TSHBP01222 138 aa7.29□□□□□ -1.24
HERC4-207ENST00000460168 GHRHP01286 108 aa7.29□□□□□ -1.24
HERC4-207ENST00000460168 RPL36AP83881 106 aaKnown RBP7.29□□□□□ -1.24
HERC4-207ENST00000460168 Q8NAQ8 132 aa7.29□□□□□ -1.24
HERC4-207ENST00000460168 RPL36ALQ969Q0 106 aaKnown RBP7.29□□□□□ -1.24
HERC4-207ENST00000460168 LINC00612Q8N6U2 182 aa7.28□□□□□ -1.24
HERC4-207ENST00000460168 VSIG2Q96IQ7 327 aa7.28□□□□□ -1.24
HERC4-207ENST00000460168 NBEAL1Q6ZS30 2694 aa7.28□□□□□ -1.24
HERC4-207ENST00000460168 IGHV3-38A0A0C4DH36 116 aa7.28□□□□□ -1.24
HERC4-207ENST00000460168 TRBV6-4A0A1B0GX49 114 aa7.28□□□□□ -1.24
HERC4-207ENST00000460168 M0R378 163 aa7.28□□□□□ -1.24
HERC4-207ENST00000460168 PRB2P02812 416 aaPredicted RBP7.28□□□□□ -1.24
HERC4-207ENST00000460168 RPL39P62891 51 aaKnown RBP7.28□□□□□ -1.24
HERC4-207ENST00000460168 SCGB1D4Q6XE38 83 aa7.28□□□□□ -1.24
HERC4-207ENST00000460168 KLKP1Q107X0 134 aa7.27□□□□□ -1.25
HERC4-207ENST00000460168 TIMM21Q9BVV7 248 aa7.27□□□□□ -1.25
HERC4-207ENST00000460168 MGAM2Q2M2H8 2515 aa7.27□□□□□ -1.25
HERC4-207ENST00000460168 ZNF815PA8K554 130 aa7.27□□□□□ -1.25
HERC4-207ENST00000460168 NDUFS5O43920 106 aa7.27□□□□□ -1.25
HERC4-207ENST00000460168 RBM3P98179 157 aaKnown RBP7.27□□□□□ -1.25
HERC4-207ENST00000460168 TRAV12-1A0A0B4J245 112 aa7.26□□□□□ -1.25
HERC4-207ENST00000460168 A0A0J9YY99 117 aa7.26□□□□□ -1.25
HERC4-207ENST00000460168 BCE1O60756 84 aa7.26□□□□□ -1.25
HERC4-207ENST00000460168 SPART-AS1P0CW21 52 aa7.26□□□□□ -1.25
HERC4-207ENST00000460168 C20orf197Q8N268 126 aa7.26□□□□□ -1.25
HERC4-207ENST00000460168 C20orf203Q8NBC4 194 aa7.25□□□□□ -1.25
HERC4-207ENST00000460168 CELA1Q9UNI1 258 aa7.25□□□□□ -1.25
HERC4-207ENST00000460168 LOC100131303A0A0U1RQF7 123 aa7.25□□□□□ -1.25
HERC4-207ENST00000460168 TMEM223A0PJW6 202 aa7.25□□□□□ -1.25
HERC4-207ENST00000460168 NDUFC1O43677 76 aa7.25□□□□□ -1.25
HERC4-207ENST00000460168 F8VRH5 84 aa7.24□□□□□ -1.25
HERC4-207ENST00000460168 LST1O00453 97 aa7.24□□□□□ -1.25
HERC4-207ENST00000460168 TIMM17AQ99595 171 aa7.24□□□□□ -1.25
HERC4-207ENST00000460168 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.24□□□□□ -1.25
HERC4-207ENST00000460168 IGIPA6NJ69 53 aa7.24□□□□□ -1.25
HERC4-207ENST00000460168 TMEM141Q96I45 108 aa7.24□□□□□ -1.25
HERC4-207ENST00000460168 UBE2D4Q9Y2X8 147 aa7.24□□□□□ -1.25
HERC4-207ENST00000460168 LINC00588Q9Y4M8 146 aa7.24□□□□□ -1.25
HERC4-207ENST00000460168 DNAH3Q8TD57 4116 aa7.23□□□□□ -1.25
HERC4-207ENST00000460168 TRIAP1O43715 76 aa7.23□□□□□ -1.25
HERC4-207ENST00000460168 PRO0255Q9UI72 69 aa7.23□□□□□ -1.25
HERC4-207ENST00000460168 TRAV13-2A0A0B4J235 113 aa7.23□□□□□ -1.25
HERC4-207ENST00000460168 EIF4EBP3O60516 100 aaPredicted RBP7.23□□□□□ -1.25
HERC4-207ENST00000460168 CHCHD7Q9BUK0 85 aa7.23□□□□□ -1.25
HERC4-207ENST00000460168 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.22□□□□□ -1.25
HERC4-207ENST00000460168 IGKV2-29A2NJV5 120 aaPredicted RBP7.22□□□□□ -1.25
HERC4-207ENST00000460168 K7EIL1 84 aa7.22□□□□□ -1.25
HERC4-207ENST00000460168 ZNF73O43830 326 aaPredicted RBP7.22□□□□□ -1.25
HERC4-207ENST00000460168 PRSS2P07478 247 aa7.22□□□□□ -1.25
HERC4-207ENST00000460168 COX6CP09669 75 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms