RNA–Protein interactions for RNA: ENST00000453560.6

RAP1B-208, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-208ENST00000453560 REG3GQ6UW15 175 aa11.91□□□□□ -0.5
RAP1B-208ENST00000453560 KRTAP7-1Q8IUC3 87 aa11.91□□□□□ -0.5
RAP1B-208ENST00000453560 MRPL18Q9H0U6 180 aaKnown RBP11.91□□□□□ -0.5
RAP1B-208ENST00000453560 UBR4Q5T4S7 5183 aa11.91□□□□□ -0.5
RAP1B-208ENST00000453560 GEMIN7Q9H840 131 aaKnown RBP11.9□□□□□ -0.5
RAP1B-208ENST00000453560 TOMM7Q9P0U1 55 aa11.9□□□□□ -0.5
RAP1B-208ENST00000453560 FABP9Q0Z7S8 132 aa11.89□□□□□ -0.51
RAP1B-208ENST00000453560 FAM19A5Q7Z5A7 132 aaPredicted RBP11.89□□□□□ -0.51
RAP1B-208ENST00000453560 CKS1BP61024 79 aa11.88□□□□□ -0.51
RAP1B-208ENST00000453560 C6orf226Q5I0X4 101 aa11.88□□□□□ -0.51
RAP1B-208ENST00000453560 C1orf137Q5JT78 98 aa11.88□□□□□ -0.51
RAP1B-208ENST00000453560 C9orf129Q5T035 196 aaKnown RBP11.88□□□□□ -0.51
RAP1B-208ENST00000453560 KRTAP11-1Q8IUC1 163 aa11.88□□□□□ -0.51
RAP1B-208ENST00000453560 TINCRA0A1B0GVN0 87 aa11.86□□□□□ -0.51
RAP1B-208ENST00000453560 KRTAP10-8P60410 259 aa11.86□□□□□ -0.51
RAP1B-208ENST00000453560 FA2HQ7L5A8 372 aa11.86□□□□□ -0.51
RAP1B-208ENST00000453560 IGLV5-45A0A087WSX0 123 aa11.85□□□□□ -0.51
RAP1B-208ENST00000453560 SMIM1B2RUZ4 78 aa11.85□□□□□ -0.51
RAP1B-208ENST00000453560 M0QXV9 152 aa11.85□□□□□ -0.51
RAP1B-208ENST00000453560 LINC00469Q8N7U9 141 aa11.85□□□□□ -0.51
RAP1B-208ENST00000453560 CST9LQ9H4G1 147 aa11.85□□□□□ -0.51
RAP1B-208ENST00000453560 SMCO4Q9NRQ5 59 aa11.85□□□□□ -0.51
RAP1B-208ENST00000453560 F8VRH5 84 aa11.84□□□□□ -0.51
RAP1B-208ENST00000453560 IGLV7-43P04211 117 aa11.83□□□□□ -0.52
RAP1B-208ENST00000453560 A0A096LNJ9 63 aa11.82□□□□□ -0.52
RAP1B-208ENST00000453560 APOC3P02656 99 aa11.82□□□□□ -0.52
RAP1B-208ENST00000453560 CXCL5P42830 114 aa11.82□□□□□ -0.52
RAP1B-208ENST00000453560 PMVKQ15126 192 aa11.82□□□□□ -0.52
RAP1B-208ENST00000453560 PDZD11Q5EBL8 140 aa11.82□□□□□ -0.52
RAP1B-208ENST00000453560 URB1-AS1Q96HZ7 61 aa11.82□□□□□ -0.52
RAP1B-208ENST00000453560 ODF1Q14990 250 aa11.81□□□□□ -0.52
RAP1B-208ENST00000453560 C18orf32Q8TCD1 76 aa11.81□□□□□ -0.52
RAP1B-208ENST00000453560 TRAPPC1Q9Y5R8 145 aa11.81□□□□□ -0.52
RAP1B-208ENST00000453560 SNAPINO95295 136 aa11.79□□□□□ -0.52
RAP1B-208ENST00000453560 UBE2BP63146 152 aa11.79□□□□□ -0.52
RAP1B-208ENST00000453560 SVBPQ8N300 66 aa11.79□□□□□ -0.52
RAP1B-208ENST00000453560 COX7B2Q8TF08 81 aa11.79□□□□□ -0.52
RAP1B-208ENST00000453560 XAGE1AQ9HD64 81 aa11.79□□□□□ -0.52
RAP1B-208ENST00000453560 DIRC1Q969H9 104 aa11.78□□□□□ -0.52
RAP1B-208ENST00000453560 SPINK8P0C7L1 97 aa11.77□□□□□ -0.53
RAP1B-208ENST00000453560 LINC00614P0C842 121 aa11.77□□□□□ -0.53
RAP1B-208ENST00000453560 NDUFA5Q16718 116 aa11.77□□□□□ -0.53
RAP1B-208ENST00000453560 LRP2P98164 4655 aa11.77□□□□□ -0.53
RAP1B-208ENST00000453560 H0Y9J4 135 aa11.76□□□□□ -0.53
RAP1B-208ENST00000453560 HBDP02042 147 aa11.75□□□□□ -0.53
RAP1B-208ENST00000453560 IGLC3P0DOY3 106 aa11.75□□□□□ -0.53
RAP1B-208ENST00000453560 C22orf24Q9Y442 160 aa11.75□□□□□ -0.53
RAP1B-208ENST00000453560 H3BRM9 83 aa11.73□□□□□ -0.53
RAP1B-208ENST00000453560 PMCHL1Q16048 86 aa11.73□□□□□ -0.53
RAP1B-208ENST00000453560 YPEL4Q96NS1 127 aa11.73□□□□□ -0.53
RAP1B-208ENST00000453560 TP73-AS1Q9UF72 201 aa11.72□□□□□ -0.53
RAP1B-208ENST00000453560 IGLV5-39A0A0G2JS06 123 aa11.71□□□□□ -0.53
RAP1B-208ENST00000453560 ZNF22P17026 224 aaPredicted RBP11.71□□□□□ -0.53
RAP1B-208ENST00000453560 NDUFA6P56556 154 aa11.71□□□□□ -0.53
RAP1B-208ENST00000453560 RAB5BP61020 215 aa11.71□□□□□ -0.53
RAP1B-208ENST00000453560 LBHQ53QV2 105 aaPredicted RBP11.7□□□□□ -0.54
RAP1B-208ENST00000453560 NUPR1O60356 82 aa11.69□□□□□ -0.54
RAP1B-208ENST00000453560 KRTAP1-4P0C5Y4 121 aa11.69□□□□□ -0.54
RAP1B-208ENST00000453560 MRPL55Q7Z7F7 128 aaKnown RBP11.69□□□□□ -0.54
RAP1B-208ENST00000453560 ATP5LO75964 103 aa11.68□□□□□ -0.54
RAP1B-208ENST00000453560 PRR26Q8N8Z3 221 aa11.68□□□□□ -0.54
RAP1B-208ENST00000453560 BAGE3Q86Y29 109 aa11.66□□□□□ -0.54
RAP1B-208ENST00000453560 IGLV5-37A0A075B6J1 123 aa11.65□□□□□ -0.54
RAP1B-208ENST00000453560 C11orf86A6NJI1 115 aa11.65□□□□□ -0.54
RAP1B-208ENST00000453560 ZNF861PO60384 105 aa11.65□□□□□ -0.54
RAP1B-208ENST00000453560 CHCHD1Q96BP2 118 aaKnown RBP11.64□□□□□ -0.55
RAP1B-208ENST00000453560 LINC00167Q96N53 147 aa11.64□□□□□ -0.55
RAP1B-208ENST00000453560 IGLV1-50A0A075B6I6 118 aa11.63□□□□□ -0.55
RAP1B-208ENST00000453560 PFN2P35080 140 aa11.62□□□□□ -0.55
RAP1B-208ENST00000453560 CBLN2Q8IUK8 224 aa11.62□□□□□ -0.55
RAP1B-208ENST00000453560 RPL37AP8A6NKH3 93 aa11.61□□□□□ -0.55
RAP1B-208ENST00000453560 BCE1O60756 84 aa11.61□□□□□ -0.55
RAP1B-208ENST00000453560 TMEM170BQ5T4T1 132 aa11.61□□□□□ -0.55
RAP1B-208ENST00000453560 CHTOPQ9Y3Y2 248 aaKnown RBP11.61□□□□□ -0.55
RAP1B-208ENST00000453560 ERG28Q9UKR5 140 aa11.6□□□□□ -0.55
RAP1B-208ENST00000453560 TRAV12-1A0A0B4J245 112 aa11.59□□□□□ -0.55
RAP1B-208ENST00000453560 GAGE10A6NGK3 116 aa11.59□□□□□ -0.55
RAP1B-208ENST00000453560 COX17Q14061 63 aa11.59□□□□□ -0.55
RAP1B-208ENST00000453560 SFTA2Q6UW10 78 aa11.59□□□□□ -0.55
RAP1B-208ENST00000453560 NKAPP1Q8N9T2 125 aa11.59□□□□□ -0.55
RAP1B-208ENST00000453560 RNF213Q63HN8 5207 aa11.58□□□□□ -0.56
RAP1B-208ENST00000453560 IFI27L1Q96BM0 104 aa11.58□□□□□ -0.56
RAP1B-208ENST00000453560 ZNF625Q96I27 306 aaPredicted RBP11.58□□□□□ -0.56
RAP1B-208ENST00000453560 SND1-IT1Q9HBX3 110 aa11.58□□□□□ -0.56
RAP1B-208ENST00000453560 RPL28P46779 137 aaKnown RBP11.57□□□□□ -0.56
RAP1B-208ENST00000453560 RPL13AP40429 203 aaKnown RBP11.56□□□□□ -0.56
RAP1B-208ENST00000453560 TMEM223A0PJW6 202 aa11.55□□□□□ -0.56
RAP1B-208ENST00000453560 SCO1O75880 301 aa11.55□□□□□ -0.56
RAP1B-208ENST00000453560 VPREB1P12018 145 aa11.55□□□□□ -0.56
RAP1B-208ENST00000453560 HSBP1O75506 76 aa11.54□□□□□ -0.56
RAP1B-208ENST00000453560 TRGC2P03986 189 aa11.54□□□□□ -0.56
RAP1B-208ENST00000453560 KRTAP13-1Q8IUC0 172 aa11.54□□□□□ -0.56
RAP1B-208ENST00000453560 FAM19A2Q8N3H0 131 aa11.54□□□□□ -0.56
RAP1B-208ENST00000453560 IGKV2-28A0A075B6P5 120 aa11.53□□□□□ -0.56
RAP1B-208ENST00000453560 IGKV2D-28P01615 120 aa11.53□□□□□ -0.56
RAP1B-208ENST00000453560 LPAP08519 4548 aa11.53□□□□□ -0.56
RAP1B-208ENST00000453560 Q8NDZ9 215 aa11.52□□□□□ -0.57
RAP1B-208ENST00000453560 LINC00310P59036 64 aa11.51□□□□□ -0.57
RAP1B-208ENST00000453560 RPL24P83731 157 aaKnown RBP11.51□□□□□ -0.57
RAP1B-208ENST00000453560 SLC7A5P1Q8MH63 180 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms